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README.md
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pretty_name: RAM-H1200
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size_categories:
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- 1K<n<10K
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task_categories:
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- image-segmentation
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# - object-detection
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- image-classification
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task_ids:
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- semantic-segmentation
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- instance-segmentation
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- object-detection
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- multi-class-classification
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tags:
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- medical
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- radiography
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- x-ray
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- rheumatoid-arthritis
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- musculoskeletal
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- svdh
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- bone-segmentation
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- joint-localization
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- bone-erosion
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- jsn
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license: cc-by-4.0
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---
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# RAM-H1200
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## Dataset Summary
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RAM-H1200 is a multi-task full-hand radiograph dataset for rheumatoid arthritis (RA) related image analysis. It is designed to support several clinically relevant computer vision tasks, including:
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- hand bone structure segmentation
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- bone erosion related segmentation
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- joint localization for Sharp/van der Heijde (SvdH) scoring
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- joint-level SvdH bone erosion (BE) scoring
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- joint-level SvdH joint space narrowing (JSN) scoring
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The dataset contains full-hand radiographs in BMP format, COCO-format annotations for segmentation and joint detection, joint-level ROI crops for scoring tasks, and study-level metadata.
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## Homepage
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- Dataset repository: `https://huggingface.co/datasets/TokyoTechMagicYang/RAM-H1200-v1`
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- Benchmark repository: `https://github.com/YSongxiao/RAM-H1200`
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## License
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This dataset is released under the **Creative Commons Attribution 4.0 International (CC BY 4.0)** license.
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## Supported Tasks and Applications
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RAM-H1200 supports the following research tasks:
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- **Segmentation**
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- Bone segmentation on full-hand radiographs
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- Bone erosion related segmentation
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- **Detection / Localization**
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- Joint localization for BE-related regions
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- Joint localization for JSN-related regions
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- **Classification / Scoring**
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- Joint-level SvdH BE score prediction
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- Joint-level SvdH JSN score prediction
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Potential use cases include:
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- automated RA severity assessment
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- multi-task medical image analysis
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- musculoskeletal structure segmentation
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- joint-level radiographic scoring
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- benchmarking AI systems for RA-related radiograph analysis
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## Dataset Structure
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```text
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RAM-H1200-v1/
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|-- Segmentation/
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| |-- train/
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| | |-- JP_HMCRD_P0001_20210203_6791_L.bmp
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| | |-- JP_HMCRD_P0001_20210203_6791_R.bmp
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| | |-- ...
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| | |-- _annotations_bone_rle.coco.json
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| | |-- _annotations_be_rle.coco.json
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| |-- val/
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| | |-- ...
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| | |-- _annotations_bone_rle.coco.json
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| | |-- _annotations_be_rle.coco.json
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| |-- test/
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| | |-- ...
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| | |-- _annotations_bone_rle.coco.json
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| | |-- _annotations_be_rle.coco.json
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|-- SvdH_Scoring/
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| |-- SvdH_BE_Scoring/
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| | |-- train/
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| | | |-- JP_HMCRD_P0001_20210203_6791_L/
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| | | | |-- CMC-T.bmp
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| | | | |-- IP.bmp
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| | | | |-- L.bmp
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| | | | |-- MCP-I.bmp
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| | | | |-- ...
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| | | |-- _annotations_be_joint_detection.coco.json
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| | | |-- _annotation_be_scores.json
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| | |-- val/
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| | | |-- ...
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| | | |-- _annotations_be_joint_detection.coco.json
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| | | |-- _annotation_be_scores.json
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| | |-- test/
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| | | |-- ...
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| | | |-- _annotations_be_joint_detection.coco.json
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| | | |-- _annotation_be_scores.json
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| |-- SvdH_JSN_Scoring/
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| | |-- train/
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| | | |-- JP_HMCRD_P0001_20210203_6791_L/
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| | | | |-- CMC-M.bmp
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| | | | |-- CMC-R.bmp
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| | | | |-- CMC-S.bmp
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| | | | |-- MCP-I.bmp
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| | | | |-- ...
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| | | |-- _annotations_jsn_joint_detection.coco.json
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| | | |-- _annotation_jsn_scores.json
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| | |-- val/
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| | | |-- ...
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| | | |-- _annotations_jsn_joint_detection.coco.json
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| | | |-- _annotation_jsn_scores.json
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| | |-- test/
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| | | |-- ...
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| | | |-- _annotations_jsn_joint_detection.coco.json
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| | | |-- _annotation_jsn_scores.json
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|-- Metadata.xlsx
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```
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## Data Organization
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### 1. Segmentation
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The `Segmentation/` directory contains full-hand radiographs in BMP format, organized into `train`, `val`, and `test` splits.
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A typical filename looks like:
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```text
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JP_HMCRD_P0001_20210203_6791_L.bmp
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```
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This naming scheme generally encodes:
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- acquisition center
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- anonymized patient identifier
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- study date (de-identified via a consistent temporal offset per patient)
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- image identifier
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- hand side (`L` for left, `R` for right)
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Each split contains two COCO-format annotation files:
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- `_annotations_bone_rle.coco.json`
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- `_annotations_be_rle.coco.json`
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#### Bone Segmentation Annotations
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`_annotations_bone_rle.coco.json` stores segmentation masks using COCO RLE encoding. The annotation categories include anatomical structures such as:
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- Capitate
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- Hamate
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- Lunate
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- Scaphoid
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- Trapezium
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- Trapezoid
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The annotation file also contains some additional categories related to non-bony structures or acquisition artifacts, such as soft tissue or implants.
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Example COCO annotation:
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```json
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{
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"id": 1,
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"image_id": 0,
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"category_id": 30,
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"bbox": [14.0, 198.0, 852.0, 1233.0],
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"area": 515212.0,
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"segmentation": {
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"size": [1431, 893],
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"counts": "..."
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}
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}
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```
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#### Bone Erosion Related Segmentation Annotations
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`_annotations_be_rle.coco.json` provides segmentation annotations related to bone erosion patterns. The category set includes:
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- `Songxiao Yang, Yafei Ou`
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- `syang(at)ok.sc.e.titech.ac.jp, yafei.ou(at)riken.jp`
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- `https://yafeiou.github.io/RAM10K`
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+
pretty_name: RAM-H1200
|
| 5 |
+
size_categories:
|
| 6 |
+
- 1K<n<10K
|
| 7 |
+
task_categories:
|
| 8 |
+
- image-segmentation
|
| 9 |
+
# - object-detection
|
| 10 |
+
- image-classification
|
| 11 |
+
task_ids:
|
| 12 |
+
- semantic-segmentation
|
| 13 |
+
- instance-segmentation
|
| 14 |
+
- object-detection
|
| 15 |
+
- multi-class-classification
|
| 16 |
+
tags:
|
| 17 |
+
- medical
|
| 18 |
+
- radiography
|
| 19 |
+
- x-ray
|
| 20 |
+
- rheumatoid-arthritis
|
| 21 |
+
- musculoskeletal
|
| 22 |
+
- svdh
|
| 23 |
+
- bone-segmentation
|
| 24 |
+
- joint-localization
|
| 25 |
+
- bone-erosion
|
| 26 |
+
- jsn
|
| 27 |
+
license: cc-by-4.0
|
| 28 |
+
---
|
| 29 |
+
|
| 30 |
+
# RAM-H1200
|
| 31 |
+
|
| 32 |
+
## Dataset Summary
|
| 33 |
+
|
| 34 |
+
RAM-H1200 is a multi-task full-hand radiograph dataset for rheumatoid arthritis (RA) related image analysis. It is designed to support several clinically relevant computer vision tasks, including:
|
| 35 |
+
|
| 36 |
+
- hand bone structure segmentation
|
| 37 |
+
- bone erosion related segmentation
|
| 38 |
+
- joint localization for Sharp/van der Heijde (SvdH) scoring
|
| 39 |
+
- joint-level SvdH bone erosion (BE) scoring
|
| 40 |
+
- joint-level SvdH joint space narrowing (JSN) scoring
|
| 41 |
+
|
| 42 |
+
The dataset contains full-hand radiographs in BMP format, COCO-format annotations for segmentation and joint detection, joint-level ROI crops for scoring tasks, and study-level metadata.
|
| 43 |
+
|
| 44 |
+
## Homepage
|
| 45 |
+
|
| 46 |
+
- Dataset repository: `https://huggingface.co/datasets/TokyoTechMagicYang/RAM-H1200-v1`
|
| 47 |
+
- Benchmark repository: `https://github.com/YSongxiao/RAM-H1200`
|
| 48 |
+
|
| 49 |
+
## License
|
| 50 |
+
|
| 51 |
+
This dataset is released under the **Creative Commons Attribution 4.0 International (CC BY 4.0)** license.
|
| 52 |
+
|
| 53 |
+
## Supported Tasks and Applications
|
| 54 |
+
|
| 55 |
+
RAM-H1200 supports the following research tasks:
|
| 56 |
+
|
| 57 |
+
- **Segmentation**
|
| 58 |
+
- Bone segmentation on full-hand radiographs
|
| 59 |
+
- Bone erosion related segmentation
|
| 60 |
+
|
| 61 |
+
- **Detection / Localization**
|
| 62 |
+
- Joint localization for BE-related regions
|
| 63 |
+
- Joint localization for JSN-related regions
|
| 64 |
+
|
| 65 |
+
- **Classification / Scoring**
|
| 66 |
+
- Joint-level SvdH BE score prediction
|
| 67 |
+
- Joint-level SvdH JSN score prediction
|
| 68 |
+
|
| 69 |
+
Potential use cases include:
|
| 70 |
+
|
| 71 |
+
- automated RA severity assessment
|
| 72 |
+
- multi-task medical image analysis
|
| 73 |
+
- musculoskeletal structure segmentation
|
| 74 |
+
- joint-level radiographic scoring
|
| 75 |
+
- benchmarking AI systems for RA-related radiograph analysis
|
| 76 |
+
|
| 77 |
+
## Dataset Structure
|
| 78 |
+
|
| 79 |
+
```text
|
| 80 |
+
RAM-H1200-v1/
|
| 81 |
+
|-- Segmentation/
|
| 82 |
+
| |-- train/
|
| 83 |
+
| | |-- JP_HMCRD_P0001_20210203_6791_L.bmp
|
| 84 |
+
| | |-- JP_HMCRD_P0001_20210203_6791_R.bmp
|
| 85 |
+
| | |-- ...
|
| 86 |
+
| | |-- _annotations_bone_rle.coco.json
|
| 87 |
+
| | |-- _annotations_be_rle.coco.json
|
| 88 |
+
| |-- val/
|
| 89 |
+
| | |-- ...
|
| 90 |
+
| | |-- _annotations_bone_rle.coco.json
|
| 91 |
+
| | |-- _annotations_be_rle.coco.json
|
| 92 |
+
| |-- test/
|
| 93 |
+
| | |-- ...
|
| 94 |
+
| | |-- _annotations_bone_rle.coco.json
|
| 95 |
+
| | |-- _annotations_be_rle.coco.json
|
| 96 |
+
|-- SvdH_Scoring/
|
| 97 |
+
| |-- SvdH_BE_Scoring/
|
| 98 |
+
| | |-- train/
|
| 99 |
+
| | | |-- JP_HMCRD_P0001_20210203_6791_L/
|
| 100 |
+
| | | | |-- CMC-T.bmp
|
| 101 |
+
| | | | |-- IP.bmp
|
| 102 |
+
| | | | |-- L.bmp
|
| 103 |
+
| | | | |-- MCP-I.bmp
|
| 104 |
+
| | | | |-- ...
|
| 105 |
+
| | | |-- _annotations_be_joint_detection.coco.json
|
| 106 |
+
| | | |-- _annotation_be_scores.json
|
| 107 |
+
| | |-- val/
|
| 108 |
+
| | | |-- ...
|
| 109 |
+
| | | |-- _annotations_be_joint_detection.coco.json
|
| 110 |
+
| | | |-- _annotation_be_scores.json
|
| 111 |
+
| | |-- test/
|
| 112 |
+
| | | |-- ...
|
| 113 |
+
| | | |-- _annotations_be_joint_detection.coco.json
|
| 114 |
+
| | | |-- _annotation_be_scores.json
|
| 115 |
+
| |-- SvdH_JSN_Scoring/
|
| 116 |
+
| | |-- train/
|
| 117 |
+
| | | |-- JP_HMCRD_P0001_20210203_6791_L/
|
| 118 |
+
| | | | |-- CMC-M.bmp
|
| 119 |
+
| | | | |-- CMC-R.bmp
|
| 120 |
+
| | | | |-- CMC-S.bmp
|
| 121 |
+
| | | | |-- MCP-I.bmp
|
| 122 |
+
| | | | |-- ...
|
| 123 |
+
| | | |-- _annotations_jsn_joint_detection.coco.json
|
| 124 |
+
| | | |-- _annotation_jsn_scores.json
|
| 125 |
+
| | |-- val/
|
| 126 |
+
| | | |-- ...
|
| 127 |
+
| | | |-- _annotations_jsn_joint_detection.coco.json
|
| 128 |
+
| | | |-- _annotation_jsn_scores.json
|
| 129 |
+
| | |-- test/
|
| 130 |
+
| | | |-- ...
|
| 131 |
+
| | | |-- _annotations_jsn_joint_detection.coco.json
|
| 132 |
+
| | | |-- _annotation_jsn_scores.json
|
| 133 |
+
|-- Metadata.xlsx
|
| 134 |
+
```
|
| 135 |
+
|
| 136 |
+
## Data Organization
|
| 137 |
+
|
| 138 |
+
### 1. Segmentation
|
| 139 |
+
|
| 140 |
+
The `Segmentation/` directory contains full-hand radiographs in BMP format, organized into `train`, `val`, and `test` splits.
|
| 141 |
+
|
| 142 |
+
A typical filename looks like:
|
| 143 |
+
|
| 144 |
+
```text
|
| 145 |
+
JP_HMCRD_P0001_20210203_6791_L.bmp
|
| 146 |
+
```
|
| 147 |
+
|
| 148 |
+
This naming scheme generally encodes:
|
| 149 |
+
|
| 150 |
+
- country or source prefix
|
| 151 |
+
- acquisition center
|
| 152 |
+
- anonymized patient identifier
|
| 153 |
+
- study date (de-identified via a consistent temporal offset per patient)
|
| 154 |
+
- image identifier
|
| 155 |
+
- hand side (`L` for left, `R` for right)
|
| 156 |
+
|
| 157 |
+
Each split contains two COCO-format annotation files:
|
| 158 |
+
|
| 159 |
+
- `_annotations_bone_rle.coco.json`
|
| 160 |
+
- `_annotations_be_rle.coco.json`
|
| 161 |
+
|
| 162 |
+
#### Bone Segmentation Annotations
|
| 163 |
+
|
| 164 |
+
`_annotations_bone_rle.coco.json` stores segmentation masks using COCO RLE encoding. The annotation categories include anatomical structures such as:
|
| 165 |
+
|
| 166 |
+
- Capitate
|
| 167 |
+
- Hamate
|
| 168 |
+
- Lunate
|
| 169 |
+
- Scaphoid
|
| 170 |
+
- Trapezium
|
| 171 |
+
- Trapezoid
|
| 172 |
+
- Radius
|
| 173 |
+
- Ulna
|
| 174 |
+
- MC1--MC5
|
| 175 |
+
- PP1--PP5
|
| 176 |
+
- DP1--DP5
|
| 177 |
+
|
| 178 |
+
The annotation file also contains some additional categories related to non-bony structures or acquisition artifacts, such as soft tissue or implants.
|
| 179 |
+
|
| 180 |
+
Example COCO annotation:
|
| 181 |
+
|
| 182 |
+
```json
|
| 183 |
+
{
|
| 184 |
+
"id": 1,
|
| 185 |
+
"image_id": 0,
|
| 186 |
+
"category_id": 30,
|
| 187 |
+
"bbox": [14.0, 198.0, 852.0, 1233.0],
|
| 188 |
+
"area": 515212.0,
|
| 189 |
+
"segmentation": {
|
| 190 |
+
"size": [1431, 893],
|
| 191 |
+
"counts": "..."
|
| 192 |
+
}
|
| 193 |
+
}
|
| 194 |
+
```
|
| 195 |
+
|
| 196 |
+
#### Bone Erosion Related Segmentation Annotations
|
| 197 |
+
|
| 198 |
+
`_annotations_be_rle.coco.json` provides segmentation annotations related to bone erosion patterns. The category set includes:
|
| 199 |
+
|
| 200 |
+
- `Non-SvdH-BE`
|
| 201 |
+
- `SvdH-BE-50`
|
| 202 |
+
- `SvdH-BE-90`
|
| 203 |
+
|
| 204 |
+
These annotations are also stored in COCO RLE format.
|
| 205 |
+
|
| 206 |
+
### 2. SvdH BE Scoring
|
| 207 |
+
|
| 208 |
+
The `SvdH_Scoring/SvdH_BE_Scoring/` directory contains ROI crops for bone erosion scoring. Each case is stored in a separate folder named by a case identifier.
|
| 209 |
+
|
| 210 |
+
Example:
|
| 211 |
+
|
| 212 |
+
```text
|
| 213 |
+
JP_HMCRD_P0001_20210203_6791_L/
|
| 214 |
+
```
|
| 215 |
+
|
| 216 |
+
A typical BE case folder contains 16 ROI images corresponding to joints or anatomical regions such as:
|
| 217 |
+
|
| 218 |
+
- `CMC-T.bmp`
|
| 219 |
+
- `IP.bmp`
|
| 220 |
+
- `L.bmp`
|
| 221 |
+
- `Tm.bmp`
|
| 222 |
+
- `R.bmp`
|
| 223 |
+
- `U.bmp`
|
| 224 |
+
- `MCP-T.bmp`
|
| 225 |
+
- `MCP-I.bmp`
|
| 226 |
+
- `MCP-M.bmp`
|
| 227 |
+
- `MCP-R.bmp`
|
| 228 |
+
- `MCP-S.bmp`
|
| 229 |
+
- `PIP-I.bmp`
|
| 230 |
+
- `PIP-M.bmp`
|
| 231 |
+
- `PIP-R.bmp`
|
| 232 |
+
- `PIP-S.bmp`
|
| 233 |
+
|
| 234 |
+
Each split also includes:
|
| 235 |
+
|
| 236 |
+
- `_annotations_be_joint_detection.coco.json`
|
| 237 |
+
- `_annotation_be_scores.json`
|
| 238 |
+
|
| 239 |
+
#### BE Joint Detection
|
| 240 |
+
|
| 241 |
+
`_annotations_be_joint_detection.coco.json` stores joint localization annotations in COCO format. The categories map to BE-relevant joints or regions, including:
|
| 242 |
+
|
| 243 |
+
- `R`
|
| 244 |
+
- `U`
|
| 245 |
+
- `L`
|
| 246 |
+
- `CMC-T`
|
| 247 |
+
- `S`
|
| 248 |
+
- `Tm`
|
| 249 |
+
- `IP`
|
| 250 |
+
- `MCP-T`
|
| 251 |
+
- `MCP-I`
|
| 252 |
+
- `MCP-M`
|
| 253 |
+
- `MCP-R`
|
| 254 |
+
- `MCP-S`
|
| 255 |
+
- `PIP-I`
|
| 256 |
+
- `PIP-M`
|
| 257 |
+
- `PIP-R`
|
| 258 |
+
- `PIP-S`
|
| 259 |
+
|
| 260 |
+
#### BE Score Labels
|
| 261 |
+
|
| 262 |
+
`_annotation_be_scores.json` stores ground-truth joint-level BE scores indexed by full image filename.
|
| 263 |
+
|
| 264 |
+
Example:
|
| 265 |
+
|
| 266 |
+
```json
|
| 267 |
+
{
|
| 268 |
+
"JP_HMCRD_P0167_20111230_3497_L.bmp": {
|
| 269 |
+
"BE_MCP-T": 0,
|
| 270 |
+
"BE_MCP-I": 1,
|
| 271 |
+
"BE_MCP-M": 0,
|
| 272 |
+
"BE_MCP-R": 0,
|
| 273 |
+
"BE_MCP-S": 0,
|
| 274 |
+
"BE_IP": 0,
|
| 275 |
+
"BE_PIP-I": 0,
|
| 276 |
+
"BE_PIP-M": 0,
|
| 277 |
+
"BE_PIP-R": 1,
|
| 278 |
+
"BE_PIP-S": 1,
|
| 279 |
+
"BE_CMC-T": 0,
|
| 280 |
+
"BE_Tm": 1,
|
| 281 |
+
"BE_S": 0,
|
| 282 |
+
"BE_L": 0,
|
| 283 |
+
"BE_U": 0,
|
| 284 |
+
"BE_R": 0
|
| 285 |
+
}
|
| 286 |
+
}
|
| 287 |
+
```
|
| 288 |
+
|
| 289 |
+
### 3. SvdH JSN Scoring
|
| 290 |
+
|
| 291 |
+
The `SvdH_Scoring/SvdH_JSN_Scoring/` directory contains ROI crops for joint space narrowing scoring.
|
| 292 |
+
|
| 293 |
+
A typical JSN case folder contains 15 ROI images corresponding to:
|
| 294 |
+
|
| 295 |
+
- `CMC-M.bmp`
|
| 296 |
+
- `CMC-R.bmp`
|
| 297 |
+
- `CMC-S.bmp`
|
| 298 |
+
- `SC.bmp`
|
| 299 |
+
- `SR.bmp`
|
| 300 |
+
- `STT.bmp`
|
| 301 |
+
- `MCP-T.bmp`
|
| 302 |
+
- `MCP-I.bmp`
|
| 303 |
+
- `MCP-M.bmp`
|
| 304 |
+
- `MCP-R.bmp`
|
| 305 |
+
- `MCP-S.bmp`
|
| 306 |
+
- `PIP-I.bmp`
|
| 307 |
+
- `PIP-M.bmp`
|
| 308 |
+
- `PIP-R.bmp`
|
| 309 |
+
- `PIP-S.bmp`
|
| 310 |
+
|
| 311 |
+
Each split also includes:
|
| 312 |
+
|
| 313 |
+
- `_annotations_jsn_joint_detection.coco.json`
|
| 314 |
+
- `_annotation_jsn_scores.json`
|
| 315 |
+
|
| 316 |
+
#### JSN Joint Detection
|
| 317 |
+
|
| 318 |
+
`_annotations_jsn_joint_detection.coco.json` stores COCO-format joint localization annotations. Categories include:
|
| 319 |
+
|
| 320 |
+
- `CMC-M`
|
| 321 |
+
- `CMC-R`
|
| 322 |
+
- `CMC-S`
|
| 323 |
+
- `SC`
|
| 324 |
+
- `SR`
|
| 325 |
+
- `STT`
|
| 326 |
+
- `MCP-T`
|
| 327 |
+
- `MCP-I`
|
| 328 |
+
- `MCP-M`
|
| 329 |
+
- `MCP-R`
|
| 330 |
+
- `MCP-S`
|
| 331 |
+
- `PIP-I`
|
| 332 |
+
- `PIP-M`
|
| 333 |
+
- `PIP-R`
|
| 334 |
+
- `PIP-S`
|
| 335 |
+
|
| 336 |
+
#### JSN Score Labels
|
| 337 |
+
|
| 338 |
+
`_annotation_jsn_scores.json` stores ground-truth joint-level JSN scores indexed by full image filename.
|
| 339 |
+
|
| 340 |
+
Example:
|
| 341 |
+
|
| 342 |
+
```json
|
| 343 |
+
{
|
| 344 |
+
"JP_HMCRD_P0167_20111230_3497_L.bmp": {
|
| 345 |
+
"JSN_MCP-T": 2,
|
| 346 |
+
"JSN_MCP-I": 0,
|
| 347 |
+
"JSN_MCP-M": 0,
|
| 348 |
+
"JSN_MCP-R": 0,
|
| 349 |
+
"JSN_MCP-S": 0,
|
| 350 |
+
"JSN_PIP-I": 0,
|
| 351 |
+
"JSN_PIP-M": 0,
|
| 352 |
+
"JSN_PIP-R": 0,
|
| 353 |
+
"JSN_PIP-S": 0,
|
| 354 |
+
"JSN_STT": 0,
|
| 355 |
+
"JSN_SC": 0,
|
| 356 |
+
"JSN_SR": 0,
|
| 357 |
+
"JSN_CMC-M": 0,
|
| 358 |
+
"JSN_CMC-R": 0,
|
| 359 |
+
"JSN_CMC-S": 0
|
| 360 |
+
}
|
| 361 |
+
}
|
| 362 |
+
```
|
| 363 |
+
|
| 364 |
+
## Metadata
|
| 365 |
+
|
| 366 |
+
The file `Metadata.xlsx` contains study-level metadata. Key columns include:
|
| 367 |
+
|
| 368 |
+
- `Mapped Image Stem`
|
| 369 |
+
- `StudyID`
|
| 370 |
+
- `Normalized PatientID`
|
| 371 |
+
- `isRA`
|
| 372 |
+
- `Sex`
|
| 373 |
+
- `Age`
|
| 374 |
+
- `Center`
|
| 375 |
+
- `PixelSpacing`
|
| 376 |
+
- `ImageSize`
|
| 377 |
+
- `LR`
|
| 378 |
+
|
| 379 |
+
These fields provide normalized identifiers, demographic information, acquisition center information, study date, image geometry, and hand laterality.
|
| 380 |
+
|
| 381 |
+
## Splits
|
| 382 |
+
|
| 383 |
+
RAM-H1200 is distributed with predefined splits:
|
| 384 |
+
|
| 385 |
+
- `train`
|
| 386 |
+
- `val`
|
| 387 |
+
- `test`
|
| 388 |
+
|
| 389 |
+
These splits are consistently provided for:
|
| 390 |
+
|
| 391 |
+
- segmentation
|
| 392 |
+
- BE scoring
|
| 393 |
+
- JSN scoring
|
| 394 |
+
|
| 395 |
+
## Data Loading Notes
|
| 396 |
+
|
| 397 |
+
This repository stores raw files rather than a single tabular annotation file. Depending on the task, users will typically load data as follows:
|
| 398 |
+
|
| 399 |
+
- use BMP images together with the corresponding COCO JSON files for segmentation or detection tasks
|
| 400 |
+
- use per-case ROI folders together with score JSON files for BE and JSN scoring tasks
|
| 401 |
+
- use `Metadata.xlsx` for study-level metadata lookup and cohort analysis
|
| 402 |
+
|
| 403 |
+
## Example Usage
|
| 404 |
+
|
| 405 |
+
### Load COCO annotations
|
| 406 |
+
|
| 407 |
+
```python
|
| 408 |
+
import json
|
| 409 |
+
from pathlib import Path
|
| 410 |
+
|
| 411 |
+
ann_path = Path("Segmentation/train/_annotations_bone_rle.coco.json")
|
| 412 |
+
with ann_path.open("r", encoding="utf-8") as f:
|
| 413 |
+
coco = json.load(f)
|
| 414 |
+
|
| 415 |
+
print(len(coco["images"]))
|
| 416 |
+
print(len(coco["annotations"]))
|
| 417 |
+
print(coco["categories"][:5])
|
| 418 |
+
```
|
| 419 |
+
|
| 420 |
+
### Load BE score labels
|
| 421 |
+
|
| 422 |
+
```python
|
| 423 |
+
import json
|
| 424 |
+
from pathlib import Path
|
| 425 |
+
|
| 426 |
+
label_path = Path("SvdH_Scoring/SvdH_BE_Scoring/train/_annotation_be_scores.json")
|
| 427 |
+
with label_path.open("r", encoding="utf-8") as f:
|
| 428 |
+
labels = json.load(f)
|
| 429 |
+
|
| 430 |
+
sample_key = next(iter(labels))
|
| 431 |
+
print(sample_key)
|
| 432 |
+
print(labels[sample_key])
|
| 433 |
+
```
|
| 434 |
+
|
| 435 |
+
### Load JSN score labels
|
| 436 |
+
|
| 437 |
+
```python
|
| 438 |
+
import json
|
| 439 |
+
from pathlib import Path
|
| 440 |
+
|
| 441 |
+
label_path = Path("SvdH_Scoring/SvdH_JSN_Scoring/train/_annotation_jsn_scores.json")
|
| 442 |
+
with label_path.open("r", encoding="utf-8") as f:
|
| 443 |
+
labels = json.load(f)
|
| 444 |
+
|
| 445 |
+
sample_key = next(iter(labels))
|
| 446 |
+
print(sample_key)
|
| 447 |
+
print(labels[sample_key])
|
| 448 |
+
```
|
| 449 |
+
|
| 450 |
+
## Intended Uses
|
| 451 |
+
|
| 452 |
+
RAM-H1200 is intended for research and benchmarking in:
|
| 453 |
+
|
| 454 |
+
- rheumatoid arthritis radiograph analysis
|
| 455 |
+
- automated scoring of structural damage
|
| 456 |
+
- medical image segmentation
|
| 457 |
+
- joint localization and ROI extraction
|
| 458 |
+
- multi-task learning with hand radiographs
|
| 459 |
+
|
| 460 |
+
## Out-of-Scope Uses
|
| 461 |
+
|
| 462 |
+
This dataset is not intended for:
|
| 463 |
+
|
| 464 |
+
- direct clinical deployment without independent validation
|
| 465 |
+
- standalone medical decision-making
|
| 466 |
+
- patient re-identification
|
| 467 |
+
- non-research use without checking the dataset license and ethics approvals
|
| 468 |
+
|
| 469 |
+
## Source Data
|
| 470 |
+
|
| 471 |
+
RAM-H1200 consists of anonymized full-hand radiographs and derived annotations from multiple acquisition centers. It includes full-image labels, ROI-level labels, and metadata relevant to RA-related structural assessment.
|
| 472 |
+
|
| 473 |
+
## Personal and Sensitive Information
|
| 474 |
+
|
| 475 |
+
The dataset uses anonymized patient and study identifiers. Metadata is limited to research-relevant study and demographic information and does not include direct personal identifiers.
|
| 476 |
+
|
| 477 |
+
## Bias, Risks, and Limitations
|
| 478 |
+
|
| 479 |
+
- The dataset may reflect center-specific acquisition protocols and patient populations.
|
| 480 |
+
- Annotation quality depends on the consistency of expert labeling and task definitions.
|
| 481 |
+
- Some anatomical regions or score levels may be imbalanced.
|
| 482 |
+
- Models trained on this dataset may not generalize to other institutions, scanners, or populations without additional validation.
|
| 483 |
+
- The dataset is intended for research use, not for direct clinical diagnosis or treatment planning.
|
| 484 |
+
|
| 485 |
+
## Citation
|
| 486 |
+
|
| 487 |
+
If you use RAM-H1200 in your research, please cite the dataset and the associated paper.
|
| 488 |
+
|
| 489 |
+
### BibTeX
|
| 490 |
+
|
| 491 |
+
If there is an associated paper, add it here as well:
|
| 492 |
+
|
| 493 |
+
```bibtex
|
| 494 |
+
@article{ram_h1200_paper_2026,
|
| 495 |
+
title = {RAM-H1200: A Unified Evaluation and Dataset on Hand Radiographs for Rheumatoid Arthritis},
|
| 496 |
+
author = {Songxiao Yang, Haolin Wang, Yao Fu, Junmu Peng, Lin Fan, Hongruixuan Chen, Jian Song, Masayuki Ikebe, Shinya Takamaeda-Yamazaki, Masatoshi Okutomi, Tamotsu Kamishima, Yafei Ou},
|
| 497 |
+
journal = {<JOURNAL_OR_CONFERENCE_HERE>},
|
| 498 |
+
year = {2026},
|
| 499 |
+
url = {<PAPER_URL_HERE>}
|
| 500 |
+
}
|
| 501 |
+
```
|
| 502 |
+
|
| 503 |
+
## Acknowledgements
|
| 504 |
+
|
| 505 |
+
We thank the annotators, clinicians, and collaborating institutions who contributed to the collection, curation, and quality control of RAM-H1200.
|
| 506 |
+
|
| 507 |
+
## Contact
|
| 508 |
+
|
| 509 |
+
For questions, issues, or collaboration inquiries, please contact:
|
| 510 |
+
|
| 511 |
+
- `Songxiao Yang, Yafei Ou`
|
| 512 |
+
- `syang(at)ok.sc.e.titech.ac.jp, yafei.ou(at)riken.jp`
|
|
|
|
|
|
|
| 513 |
- `https://yafeiou.github.io/RAM10K`
|