| Rank | Athlete | Nationality | Time | Notes |
| 1 | Félix Sánchez | Dominican Republic | 47.76 | Q, SB |
| 2 | Jehue Gordon | Trinidad and Tobago | 47.96 | Q, NR |
| 3 | Kerron Clement | United States | 48.12 | q, SB |
| 4 | Dai Greene | Great Britain | 48.19 | q |
| 5 | Mamadou Kasse Hanne | Senegal | 48.80 | PB |
| 6 | Michael Bultheel | Belgium | 49.10 | PB |
| 7 | Eric Alejandro | Puerto Rico | 49.15 | - |
| 8 | Kurt Couto | Mozambique | 51.55 | - |