Add batch 133
Browse filesThis view is limited to 50 files because it contains too many changes. See raw diff
- 1amk/1amk_ligand.mol2 +37 -0
- 1amk/1amk_ligand.sdf +33 -0
- 1amk/1amk_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1amk/1amk_protein_processed_fix.pdb +0 -0
- 1bhx/1bhx_ligand.mol2 +138 -0
- 1bhx/1bhx_ligand.sdf +126 -0
- 1bhx/1bhx_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1bhx/1bhx_protein_processed_fix.pdb +0 -0
- 1e5j/1e5j_ligand.mol2 +199 -0
- 1e5j/1e5j_ligand.sdf +189 -0
- 1e5j/1e5j_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1e5j/1e5j_protein_processed_fix.pdb +0 -0
- 1fo0/1fo0_ligand.mol2 +287 -0
- 1fo0/1fo0_ligand.sdf +281 -0
- 1fo0/1fo0_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1fo0/1fo0_protein_processed_fix.pdb +0 -0
- 1w12/1w12_ligand.mol2 +173 -0
- 1w12/1w12_ligand.sdf +161 -0
- 1w12/1w12_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1w12/1w12_protein_processed_fix.pdb +0 -0
- 1we2/1we2_ligand.mol2 +58 -0
- 1we2/1we2_ligand.sdf +50 -0
- 1we2/1we2_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1we2/1we2_protein_processed_fix.pdb +0 -0
- 1wn6/1wn6_ligand.mol2 +139 -0
- 1wn6/1wn6_ligand.sdf +129 -0
- 1wn6/1wn6_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1wn6/1wn6_protein_processed_fix.pdb +0 -0
- 1xxe/1xxe_ligand.mol2 +158 -0
- 1xxe/1xxe_ligand.sdf +148 -0
- 1xxe/1xxe_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1xxe/1xxe_protein_processed_fix.pdb +0 -0
- 1yt7/1yt7_ligand.mol2 +164 -0
- 1yt7/1yt7_ligand.sdf +154 -0
- 1yt7/1yt7_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1yt7/1yt7_protein_processed_fix.pdb +0 -0
- 1z6e/1z6e_ligand.mol2 +138 -0
- 1z6e/1z6e_ligand.sdf +128 -0
- 1z6e/1z6e_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 1z6e/1z6e_protein_processed_fix.pdb +0 -0
- 2ao6/2ao6_ligand.mol2 +109 -0
- 2ao6/2ao6_ligand.sdf +99 -0
- 2ao6/2ao6_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 2ao6/2ao6_protein_processed_fix.pdb +0 -0
- 2gnf/2gnf_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 2gnf/2gnf_protein_processed_fix.pdb +0 -0
- 2pax/2pax_ligand.mol2 +66 -0
- 2pax/2pax_ligand.sdf +56 -0
- 2pax/2pax_protein_esmfold_aligned_tr_fix.pdb +0 -0
- 2pax/2pax_protein_processed_fix.pdb +0 -0
1amk/1amk_ligand.mol2
ADDED
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###
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### Created by X-TOOL on Mon Sep 10 21:12:45 2018
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###
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@<TRIPOS>MOLECULE
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1amk_ligand
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11 10 1 0 0
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SMALL
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GAST_HUCK
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| 11 |
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@<TRIPOS>ATOM
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1 P 8.0940 -1.7350 18.4460 P.3 1 PGA 0.2032
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| 14 |
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2 O2P 8.9420 -0.5090 18.7230 O.co2 1 PGA -0.5536
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| 15 |
+
3 O3P 8.4690 -3.1080 18.9080 O.co2 1 PGA -0.5536
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| 16 |
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4 O4P 6.5410 -1.3810 18.5750 O.co2 1 PGA -0.5536
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| 17 |
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5 O1P 7.9310 -2.0970 16.8860 O.3 1 PGA -0.2622
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| 18 |
+
6 C2 9.1670 -2.4150 16.2890 C.3 1 PGA 0.1305
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| 19 |
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7 C1 8.9070 -2.4510 14.7910 C.2 1 PGA 0.0653
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| 20 |
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8 O1 9.8920 -2.1350 13.9990 O.co2 1 PGA -0.5663
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| 21 |
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9 O2 7.8380 -2.8150 14.3180 O.co2 1 PGA -0.5663
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| 22 |
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10 H1 9.5208 -3.3956 16.6399 H 1 PGA 0.0783
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11 H2 9.9171 -1.6471 16.5291 H 1 PGA 0.0783
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@<TRIPOS>BOND
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1 1 2 ar
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2 1 3 ar
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| 27 |
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3 1 4 ar
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| 28 |
+
4 1 5 1
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| 29 |
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5 5 6 1
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| 30 |
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6 6 7 1
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| 31 |
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7 7 8 ar
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| 32 |
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8 7 9 ar
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| 33 |
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9 6 10 1
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| 34 |
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10 6 11 1
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@<TRIPOS>SUBSTRUCTURE
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1 PGA 1
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1amk/1amk_ligand.sdf
ADDED
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1amk_ligand
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-I-interpret-
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14 13 0 0 0 0 0 0 0 0999 V2000
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| 5 |
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8.0940 -1.7350 18.4460 P 0 0 0 0 0
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| 6 |
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8.9420 -0.5090 18.7230 O 0 0 0 0 0
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| 7 |
+
8.4690 -3.1080 18.9080 O 0 0 0 0 0
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| 8 |
+
6.5410 -1.3810 18.5750 O 0 0 0 0 0
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| 9 |
+
7.9310 -2.0970 16.8860 O 0 0 0 0 0
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| 10 |
+
9.1670 -2.4150 16.2890 C 0 0 0 0 0
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| 11 |
+
8.9070 -2.4510 14.7910 C 0 0 0 0 0
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| 12 |
+
9.8920 -2.1350 13.9990 O 0 0 0 0 0
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| 13 |
+
7.8380 -2.8150 14.3180 O 0 0 0 0 0
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| 14 |
+
8.5201 0.2637 18.3401 H 0 0 0 0 0
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| 15 |
+
6.3903 -0.4873 18.2584 H 0 0 0 0 0
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| 16 |
+
9.5464 -3.3715 16.6485 H 0 0 0 0 0
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| 17 |
+
9.9301 -1.6787 16.5413 H 0 0 0 0 0
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| 18 |
+
10.6519 -1.8733 14.5240 H 0 0 0 0 0
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| 19 |
+
1 2 1 0 0 0
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| 20 |
+
1 3 2 0 0 0
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| 21 |
+
1 4 1 0 0 0
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| 22 |
+
1 5 1 0 0 0
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| 23 |
+
5 6 1 0 0 0
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| 24 |
+
6 7 1 0 0 0
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| 25 |
+
7 8 1 0 0 0
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| 26 |
+
7 9 2 0 0 0
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| 27 |
+
2 10 1 0 0 0
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| 28 |
+
4 11 1 0 0 0
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| 29 |
+
6 12 1 0 0 0
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| 30 |
+
6 13 1 0 0 0
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| 31 |
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8 14 1 0 0 0
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| 32 |
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M END
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$$$$
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1amk/1amk_protein_esmfold_aligned_tr_fix.pdb
ADDED
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The diff for this file is too large to render.
See raw diff
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1amk/1amk_protein_processed_fix.pdb
ADDED
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The diff for this file is too large to render.
See raw diff
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1bhx/1bhx_ligand.mol2
ADDED
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| 1 |
+
###
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| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:46 2018
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| 3 |
+
###
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| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1bhx_ligand
|
| 7 |
+
60 62 1 0 0
|
| 8 |
+
SMALL
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| 9 |
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GAST_HUCK
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| 10 |
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| 11 |
+
|
| 12 |
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@<TRIPOS>ATOM
|
| 13 |
+
1 C1 22.1690 -14.5920 25.7200 C.ar 1 R56 -0.0687
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| 14 |
+
2 C3 22.1450 -15.9400 25.3790 C.ar 1 R56 -0.0685
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| 15 |
+
3 C5 20.9710 -16.7030 25.6290 C.ar 1 R56 -0.0587
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| 16 |
+
4 C7 19.8390 -16.0960 26.2060 C.ar 1 R56 -0.0204
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| 17 |
+
5 C8 19.8790 -14.7540 26.5500 C.ar 1 R56 -0.0587
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| 18 |
+
6 C10 21.0250 -14.0020 26.3100 C.ar 1 R56 -0.0685
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| 19 |
+
7 C12 18.5670 -16.9220 26.4870 C.3 1 R56 0.1181
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| 20 |
+
8 S15 17.8430 -17.3940 24.8500 S.o2 1 R56 0.0511
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| 21 |
+
9 O16 18.8810 -18.1230 24.0360 O.2 1 R56 -0.1532
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| 22 |
+
10 O17 16.5900 -17.9970 25.0660 O.2 1 R56 -0.1532
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| 23 |
+
11 N18 17.6520 -15.8550 24.1860 N.am 1 R56 -0.2281
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| 24 |
+
12 C20 18.0550 -15.5820 22.8040 C.3 1 R56 0.1265
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| 25 |
+
13 C22 17.3480 -14.3450 22.3100 C.2 1 R56 0.2035
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| 26 |
+
14 O23 16.3540 -13.9150 22.9140 O.2 1 R56 -0.3946
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| 27 |
+
15 N24 17.8480 -13.7720 21.1870 N.am 1 R56 -0.2367
|
| 28 |
+
16 C25 19.0090 -14.3360 20.5480 C.3 1 R56 0.0938
|
| 29 |
+
17 C27 20.1060 -14.6080 21.5470 C.3 1 R56 -0.0162
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| 30 |
+
18 C30 19.5960 -15.4160 22.7580 C.3 1 R56 -0.0130
|
| 31 |
+
19 S33 19.5770 -13.0300 19.5260 S.3 1 R56 -0.1281
|
| 32 |
+
20 C34 17.9100 -12.3660 19.2870 C.3 1 R56 0.0365
|
| 33 |
+
21 C37 17.2240 -12.5620 20.5980 C.3 1 R56 0.1437
|
| 34 |
+
22 C39 15.6820 -12.7390 20.3790 C.2 1 R56 0.2027
|
| 35 |
+
23 O40 15.2270 -13.7840 19.9280 O.2 1 R56 -0.3945
|
| 36 |
+
24 N41 14.8940 -11.6530 20.6710 N.am 1 R56 -0.2849
|
| 37 |
+
25 C43 13.4600 -11.7790 20.4810 C.3 1 R56 0.0341
|
| 38 |
+
26 C46 12.7470 -10.6020 21.1150 C.3 1 R56 0.0004
|
| 39 |
+
27 C49 12.8600 -10.7240 22.6160 C.3 1 R56 0.0644
|
| 40 |
+
28 N52 12.0620 -11.8660 23.1110 N.pl3 1 R56 -0.2722
|
| 41 |
+
29 C54 11.1950 -11.7100 24.0880 C.cat 1 R56 0.2882
|
| 42 |
+
30 N55 11.0320 -10.5560 24.6390 N.pl3 1 R56 -0.2849
|
| 43 |
+
31 N58 10.5070 -12.7250 24.5240 N.pl3 1 R56 -0.2849
|
| 44 |
+
32 H1 23.0565 -13.9976 25.5356 H 1 R56 0.0559
|
| 45 |
+
33 H2 23.0134 -16.4051 24.9266 H 1 R56 0.0599
|
| 46 |
+
34 H3 20.9476 -17.7564 25.3742 H 1 R56 0.0557
|
| 47 |
+
35 H4 19.0139 -14.2882 27.0079 H 1 R56 0.0557
|
| 48 |
+
36 H5 21.0421 -12.9518 26.5780 H 1 R56 0.0599
|
| 49 |
+
37 H6 17.8453 -16.3192 27.0578 H 1 R56 0.0682
|
| 50 |
+
38 H7 18.8239 -17.8256 27.0593 H 1 R56 0.0682
|
| 51 |
+
39 H8 17.2598 -15.1216 24.7412 H 1 R56 0.1703
|
| 52 |
+
40 H9 17.7688 -16.4315 22.1665 H 1 R56 0.0753
|
| 53 |
+
41 H10 18.7596 -15.2433 19.9783 H 1 R56 0.0676
|
| 54 |
+
42 H11 20.5075 -13.6481 21.9040 H 1 R56 0.0298
|
| 55 |
+
43 H12 20.9052 -15.1780 21.0507 H 1 R56 0.0298
|
| 56 |
+
44 H13 20.0505 -16.4171 22.7216 H 1 R56 0.0309
|
| 57 |
+
45 H14 19.9157 -14.9013 23.6761 H 1 R56 0.0309
|
| 58 |
+
46 H15 17.3858 -12.9147 18.4907 H 1 R56 0.0425
|
| 59 |
+
47 H16 17.9528 -11.2975 19.0291 H 1 R56 0.0425
|
| 60 |
+
48 H17 17.3951 -11.6949 21.2529 H 1 R56 0.0811
|
| 61 |
+
49 H18 15.2960 -10.8003 21.0047 H 1 R56 0.1851
|
| 62 |
+
50 H19 13.1112 -12.7112 20.9493 H 1 R56 0.0521
|
| 63 |
+
51 H20 13.2361 -11.8033 19.4043 H 1 R56 0.0521
|
| 64 |
+
52 H21 11.6870 -10.6084 20.8212 H 1 R56 0.0318
|
| 65 |
+
53 H22 13.2139 -9.6629 20.7831 H 1 R56 0.0318
|
| 66 |
+
54 H23 12.4920 -9.7980 23.0819 H 1 R56 0.0689
|
| 67 |
+
55 H24 13.9151 -10.8768 22.8871 H 1 R56 0.0689
|
| 68 |
+
56 H25 12.1865 -12.7957 22.6854 H 1 R56 0.2642
|
| 69 |
+
57 H26 10.3512 -10.4419 25.4034 H 1 R56 0.2615
|
| 70 |
+
58 H27 11.5826 -9.7481 24.3148 H 1 R56 0.2615
|
| 71 |
+
59 H28 10.6277 -13.6525 24.0926 H 1 R56 0.2615
|
| 72 |
+
60 H29 9.8418 -12.6009 25.3005 H 1 R56 0.2615
|
| 73 |
+
@<TRIPOS>BOND
|
| 74 |
+
1 1 6 ar
|
| 75 |
+
2 1 2 ar
|
| 76 |
+
3 2 3 ar
|
| 77 |
+
4 3 4 ar
|
| 78 |
+
5 4 7 1
|
| 79 |
+
6 4 5 ar
|
| 80 |
+
7 5 6 ar
|
| 81 |
+
8 7 8 1
|
| 82 |
+
9 8 11 am
|
| 83 |
+
10 8 10 2
|
| 84 |
+
11 8 9 2
|
| 85 |
+
12 11 12 1
|
| 86 |
+
13 12 18 1
|
| 87 |
+
14 12 13 1
|
| 88 |
+
15 13 15 am
|
| 89 |
+
16 13 14 2
|
| 90 |
+
17 15 21 1
|
| 91 |
+
18 15 16 1
|
| 92 |
+
19 16 19 1
|
| 93 |
+
20 16 17 1
|
| 94 |
+
21 17 18 1
|
| 95 |
+
22 19 20 1
|
| 96 |
+
23 20 21 1
|
| 97 |
+
24 21 22 1
|
| 98 |
+
25 22 24 am
|
| 99 |
+
26 22 23 2
|
| 100 |
+
27 24 25 1
|
| 101 |
+
28 25 26 1
|
| 102 |
+
29 26 27 1
|
| 103 |
+
30 27 28 1
|
| 104 |
+
31 28 29 ar
|
| 105 |
+
32 29 31 ar
|
| 106 |
+
33 29 30 ar
|
| 107 |
+
34 1 32 1
|
| 108 |
+
35 2 33 1
|
| 109 |
+
36 3 34 1
|
| 110 |
+
37 5 35 1
|
| 111 |
+
38 6 36 1
|
| 112 |
+
39 7 37 1
|
| 113 |
+
40 7 38 1
|
| 114 |
+
41 11 39 1
|
| 115 |
+
42 12 40 1
|
| 116 |
+
43 16 41 1
|
| 117 |
+
44 17 42 1
|
| 118 |
+
45 17 43 1
|
| 119 |
+
46 18 44 1
|
| 120 |
+
47 18 45 1
|
| 121 |
+
48 20 46 1
|
| 122 |
+
49 20 47 1
|
| 123 |
+
50 21 48 1
|
| 124 |
+
51 24 49 1
|
| 125 |
+
52 25 50 1
|
| 126 |
+
53 25 51 1
|
| 127 |
+
54 26 52 1
|
| 128 |
+
55 26 53 1
|
| 129 |
+
56 27 54 1
|
| 130 |
+
57 27 55 1
|
| 131 |
+
58 28 56 1
|
| 132 |
+
59 30 57 1
|
| 133 |
+
60 30 58 1
|
| 134 |
+
61 31 59 1
|
| 135 |
+
62 31 60 1
|
| 136 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 137 |
+
1 R56 1
|
| 138 |
+
|
1bhx/1bhx_ligand.sdf
ADDED
|
@@ -0,0 +1,126 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
1bhx_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
59 61 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
22.1690 -14.5920 25.7200 C 0 0 0 0 0
|
| 6 |
+
22.1450 -15.9400 25.3790 C 0 0 0 0 0
|
| 7 |
+
20.9710 -16.7030 25.6290 C 0 0 0 0 0
|
| 8 |
+
19.8390 -16.0960 26.2060 C 0 0 0 0 0
|
| 9 |
+
19.8790 -14.7540 26.5500 C 0 0 0 0 0
|
| 10 |
+
21.0250 -14.0020 26.3100 C 0 0 0 0 0
|
| 11 |
+
18.5670 -16.9220 26.4870 C 0 0 0 0 0
|
| 12 |
+
17.8430 -17.3940 24.8500 S 0 0 0 0 0
|
| 13 |
+
18.8810 -18.1230 24.0360 O 0 0 0 0 0
|
| 14 |
+
16.5900 -17.9970 25.0660 O 0 0 0 0 0
|
| 15 |
+
17.6520 -15.8550 24.1860 N 0 0 0 0 0
|
| 16 |
+
18.0550 -15.5820 22.8040 C 0 0 0 0 0
|
| 17 |
+
17.3480 -14.3450 22.3100 C 0 0 0 0 0
|
| 18 |
+
16.3540 -13.9150 22.9140 O 0 0 0 0 0
|
| 19 |
+
17.8480 -13.7720 21.1870 N 0 0 0 0 0
|
| 20 |
+
19.0090 -14.3360 20.5480 C 0 0 0 0 0
|
| 21 |
+
20.1060 -14.6080 21.5470 C 0 0 0 0 0
|
| 22 |
+
19.5960 -15.4160 22.7580 C 0 0 0 0 0
|
| 23 |
+
19.5770 -13.0300 19.5260 S 0 0 0 0 0
|
| 24 |
+
17.9100 -12.3660 19.2870 C 0 0 0 0 0
|
| 25 |
+
17.2240 -12.5620 20.5980 C 0 0 0 0 0
|
| 26 |
+
15.6820 -12.7390 20.3790 C 0 0 0 0 0
|
| 27 |
+
15.2270 -13.7840 19.9280 O 0 0 0 0 0
|
| 28 |
+
14.8940 -11.6530 20.6710 N 0 0 0 0 0
|
| 29 |
+
13.4600 -11.7790 20.4810 C 0 0 0 0 0
|
| 30 |
+
12.7470 -10.6020 21.1150 C 0 0 0 0 0
|
| 31 |
+
12.8600 -10.7240 22.6160 C 0 0 0 0 0
|
| 32 |
+
12.0620 -11.8660 23.1110 N 0 0 0 0 0
|
| 33 |
+
11.1950 -11.7100 24.0880 C 0 0 0 0 0
|
| 34 |
+
11.0320 -10.5560 24.6390 N 0 0 0 0 0
|
| 35 |
+
10.5070 -12.7250 24.5240 N 0 0 0 0 0
|
| 36 |
+
23.0615 -13.9943 25.5345 H 0 0 0 0 0
|
| 37 |
+
23.0182 -16.4077 24.9241 H 0 0 0 0 0
|
| 38 |
+
20.9474 -17.7622 25.3728 H 0 0 0 0 0
|
| 39 |
+
19.0091 -14.2856 27.0105 H 0 0 0 0 0
|
| 40 |
+
21.0422 -12.9460 26.5795 H 0 0 0 0 0
|
| 41 |
+
17.8524 -16.3385 27.0675 H 0 0 0 0 0
|
| 42 |
+
18.8091 -17.8113 27.0690 H 0 0 0 0 0
|
| 43 |
+
17.2519 -15.1069 24.7523 H 0 0 0 0 0
|
| 44 |
+
17.7762 -16.4086 22.1504 H 0 0 0 0 0
|
| 45 |
+
18.7698 -15.2691 20.0378 H 0 0 0 0 0
|
| 46 |
+
20.4825 -13.6514 21.9092 H 0 0 0 0 0
|
| 47 |
+
20.8826 -15.1902 21.0509 H 0 0 0 0 0
|
| 48 |
+
20.0261 -16.4148 22.6837 H 0 0 0 0 0
|
| 49 |
+
19.8888 -14.8714 23.6557 H 0 0 0 0 0
|
| 50 |
+
17.3856 -12.8731 18.4771 H 0 0 0 0 0
|
| 51 |
+
17.9316 -11.3159 18.9956 H 0 0 0 0 0
|
| 52 |
+
17.3350 -11.7065 21.2643 H 0 0 0 0 0
|
| 53 |
+
15.3040 -10.7833 21.0114 H 0 0 0 0 0
|
| 54 |
+
13.1161 -12.7010 20.9497 H 0 0 0 0 0
|
| 55 |
+
13.2403 -11.7983 19.4135 H 0 0 0 0 0
|
| 56 |
+
11.6976 -10.6003 20.8201 H 0 0 0 0 0
|
| 57 |
+
13.2019 -9.6689 20.7826 H 0 0 0 0 0
|
| 58 |
+
12.4843 -9.8083 23.0725 H 0 0 0 0 0
|
| 59 |
+
13.9056 -10.8858 22.8779 H 0 0 0 0 0
|
| 60 |
+
12.1853 -12.7866 22.6895 H 0 0 0 0 0
|
| 61 |
+
11.5772 -9.7560 24.3179 H 0 0 0 0 0
|
| 62 |
+
9.8482 -12.6021 25.2930 H 0 0 0 0 0
|
| 63 |
+
10.6265 -13.6435 24.0968 H 0 0 0 0 0
|
| 64 |
+
1 6 4 0 0 0
|
| 65 |
+
1 2 4 0 0 0
|
| 66 |
+
2 3 4 0 0 0
|
| 67 |
+
3 4 4 0 0 0
|
| 68 |
+
4 7 1 0 0 0
|
| 69 |
+
4 5 4 0 0 0
|
| 70 |
+
5 6 4 0 0 0
|
| 71 |
+
7 8 1 0 0 0
|
| 72 |
+
8 11 1 0 0 0
|
| 73 |
+
8 10 2 0 0 0
|
| 74 |
+
8 9 2 0 0 0
|
| 75 |
+
11 12 1 0 0 0
|
| 76 |
+
12 18 1 0 0 0
|
| 77 |
+
12 13 1 0 0 0
|
| 78 |
+
13 15 1 0 0 0
|
| 79 |
+
13 14 2 0 0 0
|
| 80 |
+
15 21 1 0 0 0
|
| 81 |
+
15 16 1 0 0 0
|
| 82 |
+
16 19 1 0 0 0
|
| 83 |
+
16 17 1 0 0 0
|
| 84 |
+
17 18 1 0 0 0
|
| 85 |
+
19 20 1 0 0 0
|
| 86 |
+
20 21 1 0 0 0
|
| 87 |
+
21 22 1 0 0 0
|
| 88 |
+
22 24 1 0 0 0
|
| 89 |
+
22 23 2 0 0 0
|
| 90 |
+
24 25 1 0 0 0
|
| 91 |
+
25 26 1 0 0 0
|
| 92 |
+
26 27 1 0 0 0
|
| 93 |
+
27 28 1 0 0 0
|
| 94 |
+
28 29 1 0 0 0
|
| 95 |
+
29 31 1 0 0 0
|
| 96 |
+
29 30 2 0 0 0
|
| 97 |
+
1 32 1 0 0 0
|
| 98 |
+
2 33 1 0 0 0
|
| 99 |
+
3 34 1 0 0 0
|
| 100 |
+
5 35 1 0 0 0
|
| 101 |
+
6 36 1 0 0 0
|
| 102 |
+
7 37 1 0 0 0
|
| 103 |
+
7 38 1 0 0 0
|
| 104 |
+
11 39 1 0 0 0
|
| 105 |
+
12 40 1 0 0 0
|
| 106 |
+
16 41 1 0 0 0
|
| 107 |
+
17 42 1 0 0 0
|
| 108 |
+
17 43 1 0 0 0
|
| 109 |
+
18 44 1 0 0 0
|
| 110 |
+
18 45 1 0 0 0
|
| 111 |
+
20 46 1 0 0 0
|
| 112 |
+
20 47 1 0 0 0
|
| 113 |
+
21 48 1 0 0 0
|
| 114 |
+
24 49 1 0 0 0
|
| 115 |
+
25 50 1 0 0 0
|
| 116 |
+
25 51 1 0 0 0
|
| 117 |
+
26 52 1 0 0 0
|
| 118 |
+
26 53 1 0 0 0
|
| 119 |
+
27 54 1 0 0 0
|
| 120 |
+
27 55 1 0 0 0
|
| 121 |
+
28 56 1 0 0 0
|
| 122 |
+
30 57 1 0 0 0
|
| 123 |
+
31 58 1 0 0 0
|
| 124 |
+
31 59 1 0 0 0
|
| 125 |
+
M END
|
| 126 |
+
$$$$
|
1bhx/1bhx_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1bhx/1bhx_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1e5j/1e5j_ligand.mol2
ADDED
|
@@ -0,0 +1,199 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:48 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1e5j_ligand
|
| 7 |
+
90 93 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 C1 -4.3970 42.7460 12.1070 C.3 1 GLC 0.1334
|
| 14 |
+
2 C2 -5.6310 41.8700 11.7410 C.3 1 GLC 0.1189
|
| 15 |
+
3 C3 -6.8920 42.7020 11.7810 C.3 1 GLC 0.1126
|
| 16 |
+
4 C4 -7.0630 43.4260 13.1010 C.3 1 GLC 0.1118
|
| 17 |
+
5 C5 -5.7690 44.2330 13.3560 C.3 1 GLC 0.1115
|
| 18 |
+
6 C6 -5.8860 44.9020 14.7230 C.3 1 GLC 0.0730
|
| 19 |
+
7 O2 -5.4420 41.5210 10.3790 O.3 1 GLC -0.3857
|
| 20 |
+
8 O3 -7.9760 41.7910 11.6160 O.3 1 GLC -0.3865
|
| 21 |
+
9 O4 -8.2030 44.3080 13.1040 O.3 1 GLC -0.3865
|
| 22 |
+
10 O5 -4.6740 43.3550 13.3280 O.3 1 GLC -0.3553
|
| 23 |
+
11 O6 -5.8610 43.9760 15.7510 O.3 1 GLC -0.3924
|
| 24 |
+
12 C1 1.1760 43.5660 12.0220 C.3 1 SGC 0.1333
|
| 25 |
+
13 C2 0.5050 43.6790 13.3910 C.3 1 SGC 0.1175
|
| 26 |
+
14 O2 1.5000 43.3790 14.3780 O.3 1 SGC -0.3858
|
| 27 |
+
15 C3 -0.7020 42.7160 13.4170 C.3 1 SGC 0.0986
|
| 28 |
+
16 O3 -1.4380 42.8890 14.6180 O.3 1 SGC -0.3879
|
| 29 |
+
17 C4 -1.5900 43.0010 12.2230 C.3 1 SGC 0.0645
|
| 30 |
+
18 C5 -0.8360 42.9720 10.8910 C.3 1 SGC 0.0975
|
| 31 |
+
19 O5 0.2740 43.9040 10.9880 O.3 1 SGC -0.3567
|
| 32 |
+
20 C6 -1.6690 43.4320 9.6550 C.3 1 SGC 0.0716
|
| 33 |
+
21 O6 -2.2280 44.7130 9.8860 O.3 1 SGC -0.3924
|
| 34 |
+
22 S4 -2.9160 41.7240 12.1240 S.3 1 SGC -0.1184
|
| 35 |
+
23 C1 4.4160 41.1710 8.2230 C.3 1 SGC 0.1883
|
| 36 |
+
24 C2 4.3140 42.6680 8.5150 C.3 1 SGC 0.1327
|
| 37 |
+
25 O2 5.5680 43.2660 8.3900 O.3 1 SGC -0.3842
|
| 38 |
+
26 C3 3.8000 42.8670 9.9380 C.3 1 SGC 0.1001
|
| 39 |
+
27 O3 3.5220 44.2080 10.0500 O.3 1 SGC -0.3879
|
| 40 |
+
28 C4 2.5000 42.0300 10.1240 C.3 1 SGC 0.0646
|
| 41 |
+
29 C5 2.6960 40.5570 9.7250 C.3 1 SGC 0.0990
|
| 42 |
+
30 O5 3.1930 40.5490 8.4030 O.3 1 SGC -0.3420
|
| 43 |
+
31 C6 1.4230 39.6900 9.7360 C.3 1 SGC 0.0716
|
| 44 |
+
32 O6 0.3700 40.3750 9.0640 O.3 1 SGC -0.3924
|
| 45 |
+
33 S4 2.1010 42.0550 11.8830 S.3 1 SGC -0.1184
|
| 46 |
+
34 C1 6.2800 37.7230 4.7570 C.3 1 MGL 0.1876
|
| 47 |
+
35 C2 4.9060 37.5280 5.3620 C.3 1 MGL 0.1341
|
| 48 |
+
36 C3 4.3370 38.8920 5.7570 C.3 1 MGL 0.1144
|
| 49 |
+
37 C4 5.3040 39.6830 6.6110 C.3 1 MGL 0.1184
|
| 50 |
+
38 C5 6.6880 39.7830 5.9750 C.3 1 MGL 0.1134
|
| 51 |
+
39 C6 7.6520 40.2690 7.0820 C.3 1 MGL 0.0730
|
| 52 |
+
40 C7 7.9700 36.6670 3.3870 C.3 1 MGL 0.0395
|
| 53 |
+
41 O1 6.7860 36.5330 4.1800 O.3 1 MGL -0.3520
|
| 54 |
+
42 O2 3.9580 36.9810 4.4430 O.3 1 MGL -0.3841
|
| 55 |
+
43 O3 3.1580 38.6180 6.4860 O.3 1 MGL -0.3864
|
| 56 |
+
44 O4 4.8000 40.9830 6.8720 O.3 1 MGL -0.3401
|
| 57 |
+
45 O5 7.1370 38.5070 5.5470 O.3 1 MGL -0.3405
|
| 58 |
+
46 O6 8.9190 40.5520 6.3470 O.3 1 MGL -0.3924
|
| 59 |
+
47 H1 -4.2642 43.5291 11.3460 H 1 GLC 0.0740
|
| 60 |
+
48 H2 -5.7100 40.9887 12.3945 H 1 GLC 0.0655
|
| 61 |
+
49 H3 -6.8786 43.4371 10.9628 H 1 GLC 0.0647
|
| 62 |
+
50 H4 -7.1957 42.6832 13.9014 H 1 GLC 0.0647
|
| 63 |
+
51 H5 -5.6447 45.0005 12.5779 H 1 GLC 0.0646
|
| 64 |
+
52 H6 -6.8340 45.4581 14.7675 H 1 GLC 0.0584
|
| 65 |
+
53 H7 -5.0452 45.5996 14.8514 H 1 GLC 0.0584
|
| 66 |
+
54 H8 -5.3506 42.3116 9.8604 H 1 GLC 0.2100
|
| 67 |
+
55 H9 -7.8788 41.3310 10.7905 H 1 GLC 0.2100
|
| 68 |
+
56 H10 -8.1001 44.9590 12.4198 H 1 GLC 0.2100
|
| 69 |
+
57 H11 -5.0424 43.4949 15.7225 H 1 GLC 0.2095
|
| 70 |
+
58 H12 1.9384 44.3583 11.9924 H 1 GLC 0.0740
|
| 71 |
+
59 H13 0.1424 44.7053 13.5498 H 1 GLC 0.0654
|
| 72 |
+
60 H14 1.1141 43.4405 15.2440 H 1 GLC 0.2100
|
| 73 |
+
61 H15 -0.3403 41.6786 13.3622 H 1 GLC 0.0632
|
| 74 |
+
62 H16 -0.8760 42.7056 15.3617 H 1 GLC 0.2099
|
| 75 |
+
63 H17 -2.0425 43.9949 12.3550 H 1 GLC 0.0465
|
| 76 |
+
64 H18 -0.4679 41.9502 10.7165 H 1 GLC 0.0631
|
| 77 |
+
65 H19 -2.4791 42.7101 9.4747 H 1 GLC 0.0583
|
| 78 |
+
66 H20 -1.0140 43.4761 8.7724 H 1 GLC 0.0583
|
| 79 |
+
67 H21 -1.5300 45.3388 10.0399 H 1 GLC 0.2095
|
| 80 |
+
68 H22 5.1629 40.7193 8.8923 H 1 GLC 0.0938
|
| 81 |
+
69 H23 3.6157 43.1324 7.8032 H 1 GLC 0.0670
|
| 82 |
+
70 H24 5.8903 43.1412 7.5050 H 1 GLC 0.2101
|
| 83 |
+
71 H25 4.5556 42.5625 10.6772 H 1 GLC 0.0633
|
| 84 |
+
72 H26 4.3146 44.7085 9.8957 H 1 GLC 0.2099
|
| 85 |
+
73 H27 1.6848 42.4711 9.5317 H 1 GLC 0.0465
|
| 86 |
+
74 H28 3.4300 40.1058 10.4089 H 1 GLC 0.0632
|
| 87 |
+
75 H29 1.1248 39.4914 10.7760 H 1 GLC 0.0583
|
| 88 |
+
76 H30 1.6248 38.7375 9.2241 H 1 GLC 0.0583
|
| 89 |
+
77 H31 0.6276 40.5460 8.1657 H 1 GLC 0.2095
|
| 90 |
+
78 H32 6.0983 38.3655 3.8829 H 1 GLC 0.0937
|
| 91 |
+
79 H33 4.9914 36.8738 6.2422 H 1 GLC 0.0671
|
| 92 |
+
80 H34 4.0994 39.4732 4.8538 H 1 GLC 0.0648
|
| 93 |
+
81 H35 5.4102 39.1567 7.5711 H 1 GLC 0.0651
|
| 94 |
+
82 H36 6.6718 40.4850 5.1283 H 1 GLC 0.0647
|
| 95 |
+
83 H37 7.8047 39.4871 7.8405 H 1 GLC 0.0584
|
| 96 |
+
84 H38 7.2673 41.1790 7.5657 H 1 GLC 0.0584
|
| 97 |
+
85 H39 8.2630 35.6814 2.9962 H 1 GLC 0.0525
|
| 98 |
+
86 H40 8.7830 37.0719 4.0075 H 1 GLC 0.0525
|
| 99 |
+
87 H41 7.7739 37.3506 2.5478 H 1 GLC 0.0525
|
| 100 |
+
88 H42 3.1188 36.8818 4.8770 H 1 GLC 0.2101
|
| 101 |
+
89 H43 2.7587 39.4356 6.7592 H 1 GLC 0.2100
|
| 102 |
+
90 H44 9.5768 40.8604 6.9591 H 1 GLC 0.2095
|
| 103 |
+
@<TRIPOS>BOND
|
| 104 |
+
1 1 2 1
|
| 105 |
+
2 1 10 1
|
| 106 |
+
3 2 3 1
|
| 107 |
+
4 2 7 1
|
| 108 |
+
5 3 4 1
|
| 109 |
+
6 3 8 1
|
| 110 |
+
7 5 4 1
|
| 111 |
+
8 4 9 1
|
| 112 |
+
9 5 6 1
|
| 113 |
+
10 10 5 1
|
| 114 |
+
11 6 11 1
|
| 115 |
+
12 12 13 1
|
| 116 |
+
13 12 19 1
|
| 117 |
+
14 13 14 1
|
| 118 |
+
15 13 15 1
|
| 119 |
+
16 15 16 1
|
| 120 |
+
17 15 17 1
|
| 121 |
+
18 18 17 1
|
| 122 |
+
19 17 22 1
|
| 123 |
+
20 19 18 1
|
| 124 |
+
21 18 20 1
|
| 125 |
+
22 20 21 1
|
| 126 |
+
23 22 1 1
|
| 127 |
+
24 23 24 1
|
| 128 |
+
25 23 30 1
|
| 129 |
+
26 24 25 1
|
| 130 |
+
27 24 26 1
|
| 131 |
+
28 26 27 1
|
| 132 |
+
29 26 28 1
|
| 133 |
+
30 29 28 1
|
| 134 |
+
31 28 33 1
|
| 135 |
+
32 30 29 1
|
| 136 |
+
33 29 31 1
|
| 137 |
+
34 31 32 1
|
| 138 |
+
35 33 12 1
|
| 139 |
+
36 34 41 1
|
| 140 |
+
37 45 34 1
|
| 141 |
+
38 35 34 1
|
| 142 |
+
39 35 42 1
|
| 143 |
+
40 36 35 1
|
| 144 |
+
41 36 43 1
|
| 145 |
+
42 37 36 1
|
| 146 |
+
43 44 37 1
|
| 147 |
+
44 37 38 1
|
| 148 |
+
45 38 45 1
|
| 149 |
+
46 38 39 1
|
| 150 |
+
47 39 46 1
|
| 151 |
+
48 44 23 1
|
| 152 |
+
49 41 40 1
|
| 153 |
+
50 1 47 1
|
| 154 |
+
51 2 48 1
|
| 155 |
+
52 3 49 1
|
| 156 |
+
53 4 50 1
|
| 157 |
+
54 5 51 1
|
| 158 |
+
55 6 52 1
|
| 159 |
+
56 6 53 1
|
| 160 |
+
57 7 54 1
|
| 161 |
+
58 8 55 1
|
| 162 |
+
59 9 56 1
|
| 163 |
+
60 11 57 1
|
| 164 |
+
61 12 58 1
|
| 165 |
+
62 13 59 1
|
| 166 |
+
63 14 60 1
|
| 167 |
+
64 15 61 1
|
| 168 |
+
65 16 62 1
|
| 169 |
+
66 17 63 1
|
| 170 |
+
67 18 64 1
|
| 171 |
+
68 20 65 1
|
| 172 |
+
69 20 66 1
|
| 173 |
+
70 21 67 1
|
| 174 |
+
71 23 68 1
|
| 175 |
+
72 24 69 1
|
| 176 |
+
73 25 70 1
|
| 177 |
+
74 26 71 1
|
| 178 |
+
75 27 72 1
|
| 179 |
+
76 28 73 1
|
| 180 |
+
77 29 74 1
|
| 181 |
+
78 31 75 1
|
| 182 |
+
79 31 76 1
|
| 183 |
+
80 32 77 1
|
| 184 |
+
81 34 78 1
|
| 185 |
+
82 35 79 1
|
| 186 |
+
83 36 80 1
|
| 187 |
+
84 37 81 1
|
| 188 |
+
85 38 82 1
|
| 189 |
+
86 39 83 1
|
| 190 |
+
87 39 84 1
|
| 191 |
+
88 40 85 1
|
| 192 |
+
89 40 86 1
|
| 193 |
+
90 40 87 1
|
| 194 |
+
91 42 88 1
|
| 195 |
+
92 43 89 1
|
| 196 |
+
93 46 90 1
|
| 197 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 198 |
+
1 GLC 1
|
| 199 |
+
|
1e5j/1e5j_ligand.sdf
ADDED
|
@@ -0,0 +1,189 @@
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|
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|
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|
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|
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|
|
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|
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|
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|
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|
|
|
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|
|
|
|
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|
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|
|
|
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|
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|
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|
|
|
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|
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|
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|
|
|
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|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| 1 |
+
1e5j_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
90 93 0 0 0 0 0 0 0 0999 V2000
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1.1760 43.5660 12.0220 C 0 0 0 0 0
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| 17 |
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0.5050 43.6790 13.3910 C 0 0 0 0 0
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| 18 |
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1.5000 43.3790 14.3780 O 0 0 0 0 0
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| 19 |
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| 20 |
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| 21 |
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| 22 |
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| 23 |
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0.2740 43.9040 10.9880 O 0 0 0 0 0
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| 27 |
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| 28 |
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4.3140 42.6680 8.5150 C 0 0 0 0 0
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| 29 |
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| 30 |
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3.8000 42.8670 9.9380 C 0 0 0 0 0
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| 31 |
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3.5220 44.2080 10.0500 O 0 0 0 0 0
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| 32 |
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2.5000 42.0300 10.1240 C 0 0 0 0 0
|
| 33 |
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2.6960 40.5570 9.7250 C 0 0 0 0 0
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| 34 |
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3.1930 40.5490 8.4030 O 0 0 0 0 0
|
| 35 |
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1.4230 39.6900 9.7360 C 0 0 0 0 0
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| 36 |
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0.3700 40.3750 9.0640 O 0 0 0 0 0
|
| 37 |
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2.1010 42.0550 11.8830 S 0 0 0 0 0
|
| 38 |
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6.2800 37.7230 4.7570 C 0 0 0 0 0
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| 39 |
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4.9060 37.5280 5.3620 C 0 0 0 0 0
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| 40 |
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4.3370 38.8920 5.7570 C 0 0 0 0 0
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| 41 |
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5.3040 39.6830 6.6110 C 0 0 0 0 0
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| 42 |
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6.6880 39.7830 5.9750 C 0 0 0 0 0
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| 43 |
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7.6520 40.2690 7.0820 C 0 0 0 0 0
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| 44 |
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7.9700 36.6670 3.3870 C 0 0 0 0 0
|
| 45 |
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6.7860 36.5330 4.1800 O 0 0 0 0 0
|
| 46 |
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3.9580 36.9810 4.4430 O 0 0 0 0 0
|
| 47 |
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3.1580 38.6180 6.4860 O 0 0 0 0 0
|
| 48 |
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4.8000 40.9830 6.8720 O 0 0 0 0 0
|
| 49 |
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7.1370 38.5070 5.5470 O 0 0 0 0 0
|
| 50 |
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8.9190 40.5520 6.3470 O 0 0 0 0 0
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| 51 |
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| 53 |
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| 54 |
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| 55 |
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| 56 |
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| 58 |
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| 59 |
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| 60 |
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| 61 |
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| 62 |
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1.9556 44.3183 11.9022 H 0 0 0 0 0
|
| 63 |
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0.1183 44.6764 13.6000 H 0 0 0 0 0
|
| 64 |
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1.1101 43.4412 15.2530 H 0 0 0 0 0
|
| 65 |
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|
| 66 |
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| 67 |
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| 69 |
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| 70 |
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|
| 71 |
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|
| 72 |
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5.1496 40.7422 8.9057 H 0 0 0 0 0
|
| 73 |
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3.6275 43.1267 7.8034 H 0 0 0 0 0
|
| 74 |
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5.4934 44.2050 8.5751 H 0 0 0 0 0
|
| 75 |
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4.5211 42.5498 10.6913 H 0 0 0 0 0
|
| 76 |
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3.1923 44.3927 10.9325 H 0 0 0 0 0
|
| 77 |
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1.7190 42.4579 9.4954 H 0 0 0 0 0
|
| 78 |
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3.3651 40.1249 10.4691 H 0 0 0 0 0
|
| 79 |
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1.1273 39.4952 10.7669 H 0 0 0 0 0
|
| 80 |
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1.6234 38.7472 9.2271 H 0 0 0 0 0
|
| 81 |
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-0.4211 39.8312 9.0733 H 0 0 0 0 0
|
| 82 |
+
6.1858 38.3697 3.8846 H 0 0 0 0 0
|
| 83 |
+
5.0426 36.8459 6.2011 H 0 0 0 0 0
|
| 84 |
+
4.1468 39.4983 4.8714 H 0 0 0 0 0
|
| 85 |
+
5.4073 39.1412 7.5512 H 0 0 0 0 0
|
| 86 |
+
6.6537 40.4546 5.1172 H 0 0 0 0 0
|
| 87 |
+
7.7853 39.5297 7.8718 H 0 0 0 0 0
|
| 88 |
+
7.2725 41.1441 7.6096 H 0 0 0 0 0
|
| 89 |
+
7.7744 37.3446 2.5559 H 0 0 0 0 0
|
| 90 |
+
8.7748 37.0683 4.0029 H 0 0 0 0 0
|
| 91 |
+
8.2594 35.6898 3.0004 H 0 0 0 0 0
|
| 92 |
+
3.1099 36.8808 4.8816 H 0 0 0 0 0
|
| 93 |
+
2.7545 39.4442 6.7620 H 0 0 0 0 0
|
| 94 |
+
9.5837 40.8636 6.9656 H 0 0 0 0 0
|
| 95 |
+
1 2 1 0 0 0
|
| 96 |
+
1 10 1 0 0 0
|
| 97 |
+
2 3 1 0 0 0
|
| 98 |
+
2 7 1 0 0 0
|
| 99 |
+
3 4 1 0 0 0
|
| 100 |
+
3 8 1 0 0 0
|
| 101 |
+
5 4 1 0 0 0
|
| 102 |
+
4 9 1 0 0 0
|
| 103 |
+
5 6 1 0 0 0
|
| 104 |
+
10 5 1 0 0 0
|
| 105 |
+
6 11 1 0 0 0
|
| 106 |
+
12 13 1 0 0 0
|
| 107 |
+
12 19 1 0 0 0
|
| 108 |
+
13 14 1 0 0 0
|
| 109 |
+
13 15 1 0 0 0
|
| 110 |
+
15 16 1 0 0 0
|
| 111 |
+
15 17 1 0 0 0
|
| 112 |
+
18 17 1 0 0 0
|
| 113 |
+
17 22 1 0 0 0
|
| 114 |
+
19 18 1 0 0 0
|
| 115 |
+
18 20 1 0 0 0
|
| 116 |
+
20 21 1 0 0 0
|
| 117 |
+
22 1 1 0 0 0
|
| 118 |
+
23 24 1 0 0 0
|
| 119 |
+
23 30 1 0 0 0
|
| 120 |
+
24 25 1 0 0 0
|
| 121 |
+
24 26 1 0 0 0
|
| 122 |
+
26 27 1 0 0 0
|
| 123 |
+
26 28 1 0 0 0
|
| 124 |
+
29 28 1 0 0 0
|
| 125 |
+
28 33 1 0 0 0
|
| 126 |
+
30 29 1 0 0 0
|
| 127 |
+
29 31 1 0 0 0
|
| 128 |
+
31 32 1 0 0 0
|
| 129 |
+
33 12 1 0 0 0
|
| 130 |
+
34 41 1 0 0 0
|
| 131 |
+
45 34 1 0 0 0
|
| 132 |
+
35 34 1 0 0 0
|
| 133 |
+
35 42 1 0 0 0
|
| 134 |
+
36 35 1 0 0 0
|
| 135 |
+
36 43 1 0 0 0
|
| 136 |
+
37 36 1 0 0 0
|
| 137 |
+
44 37 1 0 0 0
|
| 138 |
+
37 38 1 0 0 0
|
| 139 |
+
38 45 1 0 0 0
|
| 140 |
+
38 39 1 0 0 0
|
| 141 |
+
39 46 1 0 0 0
|
| 142 |
+
44 23 1 0 0 0
|
| 143 |
+
41 40 1 0 0 0
|
| 144 |
+
1 47 1 0 0 0
|
| 145 |
+
2 48 1 0 0 0
|
| 146 |
+
3 49 1 0 0 0
|
| 147 |
+
4 50 1 0 0 0
|
| 148 |
+
5 51 1 0 0 0
|
| 149 |
+
6 52 1 0 0 0
|
| 150 |
+
6 53 1 0 0 0
|
| 151 |
+
7 54 1 0 0 0
|
| 152 |
+
8 55 1 0 0 0
|
| 153 |
+
9 56 1 0 0 0
|
| 154 |
+
11 57 1 0 0 0
|
| 155 |
+
12 58 1 0 0 0
|
| 156 |
+
13 59 1 0 0 0
|
| 157 |
+
14 60 1 0 0 0
|
| 158 |
+
15 61 1 0 0 0
|
| 159 |
+
16 62 1 0 0 0
|
| 160 |
+
17 63 1 0 0 0
|
| 161 |
+
18 64 1 0 0 0
|
| 162 |
+
20 65 1 0 0 0
|
| 163 |
+
20 66 1 0 0 0
|
| 164 |
+
21 67 1 0 0 0
|
| 165 |
+
23 68 1 0 0 0
|
| 166 |
+
24 69 1 0 0 0
|
| 167 |
+
25 70 1 0 0 0
|
| 168 |
+
26 71 1 0 0 0
|
| 169 |
+
27 72 1 0 0 0
|
| 170 |
+
28 73 1 0 0 0
|
| 171 |
+
29 74 1 0 0 0
|
| 172 |
+
31 75 1 0 0 0
|
| 173 |
+
31 76 1 0 0 0
|
| 174 |
+
32 77 1 0 0 0
|
| 175 |
+
34 78 1 0 0 0
|
| 176 |
+
35 79 1 0 0 0
|
| 177 |
+
36 80 1 0 0 0
|
| 178 |
+
37 81 1 0 0 0
|
| 179 |
+
38 82 1 0 0 0
|
| 180 |
+
39 83 1 0 0 0
|
| 181 |
+
39 84 1 0 0 0
|
| 182 |
+
40 85 1 0 0 0
|
| 183 |
+
40 86 1 0 0 0
|
| 184 |
+
40 87 1 0 0 0
|
| 185 |
+
42 88 1 0 0 0
|
| 186 |
+
43 89 1 0 0 0
|
| 187 |
+
46 90 1 0 0 0
|
| 188 |
+
M END
|
| 189 |
+
$$$$
|
1e5j/1e5j_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1e5j/1e5j_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1fo0/1fo0_ligand.mol2
ADDED
|
@@ -0,0 +1,287 @@
|
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|
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|
|
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|
|
|
|
|
|
|
|
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|
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|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:47 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1fo0_ligand
|
| 7 |
+
135 136 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 N 26.6090 42.0530 46.0620 N.4 1 ILE 0.2381
|
| 14 |
+
2 CA 26.3900 40.6410 46.4320 C.3 1 ILE 0.0676
|
| 15 |
+
3 C 24.9150 40.3210 46.6720 C.2 1 ILE 0.2271
|
| 16 |
+
4 O 24.1470 41.1170 47.1870 O.2 1 ILE -0.3907
|
| 17 |
+
5 CB 27.1940 40.2640 47.6880 C.3 1 ILE 0.0164
|
| 18 |
+
6 CG1 26.7320 41.1110 48.8660 C.3 1 ILE -0.0460
|
| 19 |
+
7 CG2 28.6480 40.5650 47.3730 C.3 1 ILE -0.0551
|
| 20 |
+
8 CD1 27.4910 40.8010 50.1280 C.3 1 ILE -0.0647
|
| 21 |
+
9 N 24.5470 39.1220 46.2520 N.am 1 ASN -0.2589
|
| 22 |
+
10 CA 23.2090 38.5980 46.3130 C.3 1 ASN 0.1477
|
| 23 |
+
11 C 22.7560 38.3920 47.7400 C.2 1 ASN 0.2064
|
| 24 |
+
12 O 23.4640 38.5930 48.7080 O.2 1 ASN -0.3942
|
| 25 |
+
13 CB 23.1280 37.2960 45.5000 C.3 1 ASN 0.0773
|
| 26 |
+
14 CG 21.7500 36.9800 44.9770 C.2 1 ASN 0.1780
|
| 27 |
+
15 OD1 20.7520 37.6250 45.3150 O.2 1 ASN -0.3970
|
| 28 |
+
16 ND2 21.5940 35.9800 44.1290 N.am 1 ASN -0.3007
|
| 29 |
+
17 N 21.5160 37.9820 47.8940 N.am 1 PHE -0.2618
|
| 30 |
+
18 CA 20.9270 37.7010 49.2180 C.3 1 PHE 0.1404
|
| 31 |
+
19 C 20.8690 36.2110 49.4980 C.2 1 PHE 0.2060
|
| 32 |
+
20 O 21.0020 35.3470 48.6110 O.2 1 PHE -0.3942
|
| 33 |
+
21 CB 19.5320 38.2860 49.1190 C.3 1 PHE 0.0214
|
| 34 |
+
22 CG 18.5490 38.0700 50.1990 C.ar 1 PHE -0.0386
|
| 35 |
+
23 CD1 18.5890 38.7000 51.4260 C.ar 1 PHE -0.0601
|
| 36 |
+
24 CD2 17.4760 37.2240 49.9150 C.ar 1 PHE -0.0601
|
| 37 |
+
25 CE1 17.6060 38.4910 52.3810 C.ar 1 PHE -0.0686
|
| 38 |
+
26 CE2 16.4950 37.0260 50.8500 C.ar 1 PHE -0.0686
|
| 39 |
+
27 CZ 16.5580 37.6470 52.0750 C.ar 1 PHE -0.0687
|
| 40 |
+
28 N 20.6770 35.8650 50.7500 N.am 1 ASP -0.2620
|
| 41 |
+
29 CA 20.5230 34.5070 51.2770 C.3 1 ASP 0.1423
|
| 42 |
+
30 C 19.0130 34.2040 51.3840 C.2 1 ASP 0.2057
|
| 43 |
+
31 O 18.3460 34.6060 52.3490 O.2 1 ASP -0.3943
|
| 44 |
+
32 CB 21.0060 34.4810 52.7520 C.3 1 ASP 0.0406
|
| 45 |
+
33 CG 22.5300 34.4940 52.7060 C.2 1 ASP 0.0393
|
| 46 |
+
34 OD1 23.1100 35.4850 53.1840 O.co2 1 ASP -0.5688
|
| 47 |
+
35 OD2 23.0620 33.5170 52.1310 O.co2 1 ASP -0.5688
|
| 48 |
+
36 N 18.5620 33.5270 50.3400 N.am 1 PHE -0.2618
|
| 49 |
+
37 CA 17.1940 33.1490 50.1560 C.3 1 PHE 0.1404
|
| 50 |
+
38 C 16.7390 31.9970 51.0390 C.2 1 PHE 0.2061
|
| 51 |
+
39 O 17.3310 30.9160 51.0680 O.2 1 PHE -0.3942
|
| 52 |
+
40 CB 16.9030 32.7220 48.6960 C.3 1 PHE 0.0214
|
| 53 |
+
41 CG 17.0350 33.8660 47.7330 C.ar 1 PHE -0.0386
|
| 54 |
+
42 CD1 15.9770 34.7580 47.5170 C.ar 1 PHE -0.0601
|
| 55 |
+
43 CD2 18.2300 34.0940 47.0730 C.ar 1 PHE -0.0601
|
| 56 |
+
44 CE1 16.1010 35.8180 46.6680 C.ar 1 PHE -0.0686
|
| 57 |
+
45 CE2 18.3640 35.1770 46.2250 C.ar 1 PHE -0.0686
|
| 58 |
+
46 CZ 17.3000 36.0280 46.0050 C.ar 1 PHE -0.0687
|
| 59 |
+
47 N 15.6360 32.2320 51.7320 N.am 1 ASN -0.2615
|
| 60 |
+
48 CA 15.0050 31.2030 52.5320 C.3 1 ASN 0.1476
|
| 61 |
+
49 C 14.0900 30.4340 51.5950 C.2 1 ASN 0.2063
|
| 62 |
+
50 O 14.2190 30.5940 50.3620 O.2 1 ASN -0.3942
|
| 63 |
+
51 CB 14.2430 31.8510 53.6740 C.3 1 ASN 0.0773
|
| 64 |
+
52 CG 15.0170 31.6430 54.9730 C.2 1 ASN 0.1780
|
| 65 |
+
53 OD1 15.6930 30.6110 55.0810 O.2 1 ASN -0.3970
|
| 66 |
+
54 ND2 14.9040 32.6060 55.8720 N.am 1 ASN -0.3007
|
| 67 |
+
55 N 13.1720 29.6070 52.0800 N.am 1 THR -0.2612
|
| 68 |
+
56 CA 12.3740 28.8710 51.0920 C.3 1 THR 0.1564
|
| 69 |
+
57 C 10.9470 29.3340 51.1720 C.2 1 THR 0.2059
|
| 70 |
+
58 O 10.5520 30.0140 52.1020 O.2 1 THR -0.3943
|
| 71 |
+
59 CB 12.4300 27.3630 51.4010 C.3 1 THR 0.0924
|
| 72 |
+
60 OG1 11.9520 27.1150 52.7340 O.3 1 THR -0.3874
|
| 73 |
+
61 CG2 13.8590 26.8490 51.3130 C.3 1 THR -0.0346
|
| 74 |
+
62 N 10.1320 28.8830 50.2510 N.am 1 ILE -0.2691
|
| 75 |
+
63 CA 8.7150 29.2240 50.2880 C.3 1 ILE 0.0969
|
| 76 |
+
64 C 7.9020 28.0610 50.9070 C.2 1 ILE 0.0604
|
| 77 |
+
65 O 6.6350 28.2370 50.9000 O.co2 1 ILE -0.5666
|
| 78 |
+
66 CB 8.2020 29.3430 48.8380 C.3 1 ILE -0.0092
|
| 79 |
+
67 CG1 8.4090 27.9650 48.1820 C.3 1 ILE -0.0497
|
| 80 |
+
68 CG2 8.8490 30.4480 48.0920 C.3 1 ILE -0.0588
|
| 81 |
+
69 CD1 7.8290 27.9670 46.8190 C.3 1 ILE -0.0649
|
| 82 |
+
70 OXT 8.5440 27.0430 51.3010 O.co2 1 ILE -0.5666
|
| 83 |
+
71 H1 27.5933 42.2130 45.9150 H 1 ILE 0.2015
|
| 84 |
+
72 H2 26.2788 42.6499 46.8041 H 1 ILE 0.2015
|
| 85 |
+
73 H3 26.1046 42.2604 45.2143 H 1 ILE 0.2015
|
| 86 |
+
74 H4 26.7424 40.0190 45.5960 H 1 ILE 0.1101
|
| 87 |
+
75 H5 27.0644 39.1972 47.9226 H 1 ILE 0.0378
|
| 88 |
+
76 H6 25.6629 40.9199 49.0408 H 1 ILE 0.0269
|
| 89 |
+
77 H7 26.8789 42.1724 48.6171 H 1 ILE 0.0269
|
| 90 |
+
78 H8 28.9737 39.9495 46.5215 H 1 ILE 0.0236
|
| 91 |
+
79 H9 29.2689 40.3339 48.2511 H 1 ILE 0.0236
|
| 92 |
+
80 H10 28.7552 41.6296 47.1180 H 1 ILE 0.0236
|
| 93 |
+
81 H11 27.1199 41.4376 50.9448 H 1 ILE 0.0230
|
| 94 |
+
82 H12 28.5619 40.9957 49.9691 H 1 ILE 0.0230
|
| 95 |
+
83 H13 27.3459 39.7432 50.3927 H 1 ILE 0.0230
|
| 96 |
+
84 H14 25.2548 38.5335 45.8613 H 1 ASN 0.1886
|
| 97 |
+
85 H15 22.5331 39.3323 45.8504 H 1 ASN 0.0826
|
| 98 |
+
86 H16 23.4511 36.4656 46.1450 H 1 ASN 0.0551
|
| 99 |
+
87 H17 23.8114 37.3815 44.6423 H 1 ASN 0.0551
|
| 100 |
+
88 H18 20.6844 35.7614 43.7756 H 1 ASN 0.1814
|
| 101 |
+
89 H19 22.3854 35.4413 43.8402 H 1 ASN 0.1814
|
| 102 |
+
90 H20 20.9486 37.8553 47.0804 H 1 PHE 0.1885
|
| 103 |
+
91 H21 21.5036 38.1970 50.0127 H 1 PHE 0.0823
|
| 104 |
+
92 H22 19.0845 37.8793 48.2001 H 1 PHE 0.0474
|
| 105 |
+
93 H23 19.6535 39.3745 49.0171 H 1 PHE 0.0474
|
| 106 |
+
94 H24 19.4082 39.3741 51.6484 H 1 PHE 0.0557
|
| 107 |
+
95 H25 17.4190 36.7239 48.9549 H 1 PHE 0.0557
|
| 108 |
+
96 H26 17.6595 38.9799 53.3470 H 1 PHE 0.0599
|
| 109 |
+
97 H27 15.6604 36.3730 50.6219 H 1 PHE 0.0599
|
| 110 |
+
98 H28 15.7777 37.4721 52.8068 H 1 PHE 0.0559
|
| 111 |
+
99 H29 20.6309 36.6095 51.4161 H 1 ASP 0.1884
|
| 112 |
+
100 H30 21.0542 33.7734 50.6528 H 1 ASP 0.0819
|
| 113 |
+
101 H31 20.6483 33.5697 53.2535 H 1 ASP 0.0478
|
| 114 |
+
102 H32 20.6341 35.3655 53.2898 H 1 ASP 0.0478
|
| 115 |
+
103 H33 19.2194 33.2626 49.6344 H 1 PHE 0.1885
|
| 116 |
+
104 H34 16.5793 34.0292 50.3952 H 1 PHE 0.0823
|
| 117 |
+
105 H35 15.8774 32.3284 48.6398 H 1 PHE 0.0474
|
| 118 |
+
106 H36 17.6145 31.9337 48.4090 H 1 PHE 0.0474
|
| 119 |
+
107 H37 15.0384 34.6023 48.0364 H 1 PHE 0.0557
|
| 120 |
+
108 H38 19.0654 33.4194 47.2220 H 1 PHE 0.0557
|
| 121 |
+
109 H39 15.2667 36.4924 46.5126 H 1 PHE 0.0599
|
| 122 |
+
110 H40 19.3108 35.3592 45.7295 H 1 PHE 0.0599
|
| 123 |
+
111 H41 17.4017 36.8583 45.3156 H 1 PHE 0.0559
|
| 124 |
+
112 H42 15.2276 33.1443 51.7023 H 1 ASN 0.1885
|
| 125 |
+
113 H43 15.7647 30.5241 52.9466 H 1 ASN 0.0826
|
| 126 |
+
114 H44 13.2477 31.3907 53.7607 H 1 ASN 0.0551
|
| 127 |
+
115 H45 14.1332 32.9280 53.4792 H 1 ASN 0.0551
|
| 128 |
+
116 H46 15.3851 32.5334 56.7456 H 1 ASN 0.1814
|
| 129 |
+
117 H47 14.3374 33.4069 55.6783 H 1 ASN 0.1814
|
| 130 |
+
118 H48 13.0319 29.4918 53.0634 H 1 THR 0.1884
|
| 131 |
+
119 H49 12.7702 29.0574 50.0829 H 1 THR 0.0826
|
| 132 |
+
120 H50 11.8010 26.8243 50.6770 H 1 THR 0.0639
|
| 133 |
+
121 H51 12.5049 27.5712 53.3575 H 1 THR 0.2101
|
| 134 |
+
122 H52 13.8757 25.7721 51.5368 H 1 THR 0.0257
|
| 135 |
+
123 H53 14.4868 27.3845 52.0404 H 1 THR 0.0257
|
| 136 |
+
124 H54 14.2478 27.0186 50.2981 H 1 THR 0.0257
|
| 137 |
+
125 H55 10.4840 28.3011 49.5179 H 1 ILE 0.1875
|
| 138 |
+
126 H56 8.5595 30.1580 50.8478 H 1 ILE 0.0729
|
| 139 |
+
127 H57 7.1232 29.5561 48.8655 H 1 ILE 0.0338
|
| 140 |
+
128 H58 7.9131 27.1932 48.7889 H 1 ILE 0.0267
|
| 141 |
+
129 H59 9.4855 27.7476 48.1206 H 1 ILE 0.0267
|
| 142 |
+
130 H60 8.6633 31.3994 48.6119 H 1 ILE 0.0234
|
| 143 |
+
131 H61 8.4315 30.4980 47.0756 H 1 ILE 0.0234
|
| 144 |
+
132 H62 9.9325 30.2668 48.0349 H 1 ILE 0.0234
|
| 145 |
+
133 H63 7.9794 26.9810 46.3551 H 1 ILE 0.0230
|
| 146 |
+
134 H64 8.3247 28.7379 46.2107 H 1 ILE 0.0230
|
| 147 |
+
135 H65 6.7522 28.1835 46.8790 H 1 ILE 0.0230
|
| 148 |
+
@<TRIPOS>BOND
|
| 149 |
+
1 2 1 1
|
| 150 |
+
2 2 5 1
|
| 151 |
+
3 3 2 1
|
| 152 |
+
4 3 4 2
|
| 153 |
+
5 5 7 1
|
| 154 |
+
6 5 6 1
|
| 155 |
+
7 6 8 1
|
| 156 |
+
8 10 9 1
|
| 157 |
+
9 10 13 1
|
| 158 |
+
10 11 10 1
|
| 159 |
+
11 11 12 2
|
| 160 |
+
12 13 14 1
|
| 161 |
+
13 14 16 am
|
| 162 |
+
14 14 15 2
|
| 163 |
+
15 9 3 am
|
| 164 |
+
16 18 17 1
|
| 165 |
+
17 18 21 1
|
| 166 |
+
18 19 18 1
|
| 167 |
+
19 19 20 2
|
| 168 |
+
20 21 22 1
|
| 169 |
+
21 22 23 ar
|
| 170 |
+
22 22 24 ar
|
| 171 |
+
23 24 26 ar
|
| 172 |
+
24 26 27 ar
|
| 173 |
+
25 25 27 ar
|
| 174 |
+
26 23 25 ar
|
| 175 |
+
27 17 11 am
|
| 176 |
+
28 29 28 1
|
| 177 |
+
29 29 32 1
|
| 178 |
+
30 30 29 1
|
| 179 |
+
31 30 31 2
|
| 180 |
+
32 32 33 1
|
| 181 |
+
33 33 34 ar
|
| 182 |
+
34 33 35 ar
|
| 183 |
+
35 28 19 am
|
| 184 |
+
36 37 36 1
|
| 185 |
+
37 37 40 1
|
| 186 |
+
38 38 37 1
|
| 187 |
+
39 38 39 2
|
| 188 |
+
40 40 41 1
|
| 189 |
+
41 41 42 ar
|
| 190 |
+
42 41 43 ar
|
| 191 |
+
43 43 45 ar
|
| 192 |
+
44 45 46 ar
|
| 193 |
+
45 44 46 ar
|
| 194 |
+
46 42 44 ar
|
| 195 |
+
47 36 30 am
|
| 196 |
+
48 48 47 1
|
| 197 |
+
49 48 51 1
|
| 198 |
+
50 49 48 1
|
| 199 |
+
51 49 50 2
|
| 200 |
+
52 51 52 1
|
| 201 |
+
53 52 54 am
|
| 202 |
+
54 52 53 2
|
| 203 |
+
55 47 38 am
|
| 204 |
+
56 56 55 1
|
| 205 |
+
57 56 59 1
|
| 206 |
+
58 57 56 1
|
| 207 |
+
59 57 58 2
|
| 208 |
+
60 59 61 1
|
| 209 |
+
61 59 60 1
|
| 210 |
+
62 55 49 am
|
| 211 |
+
63 62 63 1
|
| 212 |
+
64 63 66 1
|
| 213 |
+
65 63 64 1
|
| 214 |
+
66 64 65 ar
|
| 215 |
+
67 64 70 ar
|
| 216 |
+
68 66 68 1
|
| 217 |
+
69 66 67 1
|
| 218 |
+
70 67 69 1
|
| 219 |
+
71 57 62 am
|
| 220 |
+
72 1 71 1
|
| 221 |
+
73 1 72 1
|
| 222 |
+
74 1 73 1
|
| 223 |
+
75 2 74 1
|
| 224 |
+
76 5 75 1
|
| 225 |
+
77 6 76 1
|
| 226 |
+
78 6 77 1
|
| 227 |
+
79 7 78 1
|
| 228 |
+
80 7 79 1
|
| 229 |
+
81 7 80 1
|
| 230 |
+
82 8 81 1
|
| 231 |
+
83 8 82 1
|
| 232 |
+
84 8 83 1
|
| 233 |
+
85 9 84 1
|
| 234 |
+
86 10 85 1
|
| 235 |
+
87 13 86 1
|
| 236 |
+
88 13 87 1
|
| 237 |
+
89 16 88 1
|
| 238 |
+
90 16 89 1
|
| 239 |
+
91 17 90 1
|
| 240 |
+
92 18 91 1
|
| 241 |
+
93 21 92 1
|
| 242 |
+
94 21 93 1
|
| 243 |
+
95 23 94 1
|
| 244 |
+
96 24 95 1
|
| 245 |
+
97 25 96 1
|
| 246 |
+
98 26 97 1
|
| 247 |
+
99 27 98 1
|
| 248 |
+
100 28 99 1
|
| 249 |
+
101 29 100 1
|
| 250 |
+
102 32 101 1
|
| 251 |
+
103 32 102 1
|
| 252 |
+
104 36 103 1
|
| 253 |
+
105 37 104 1
|
| 254 |
+
106 40 105 1
|
| 255 |
+
107 40 106 1
|
| 256 |
+
108 42 107 1
|
| 257 |
+
109 43 108 1
|
| 258 |
+
110 44 109 1
|
| 259 |
+
111 45 110 1
|
| 260 |
+
112 46 111 1
|
| 261 |
+
113 47 112 1
|
| 262 |
+
114 48 113 1
|
| 263 |
+
115 51 114 1
|
| 264 |
+
116 51 115 1
|
| 265 |
+
117 54 116 1
|
| 266 |
+
118 54 117 1
|
| 267 |
+
119 55 118 1
|
| 268 |
+
120 56 119 1
|
| 269 |
+
121 59 120 1
|
| 270 |
+
122 60 121 1
|
| 271 |
+
123 61 122 1
|
| 272 |
+
124 61 123 1
|
| 273 |
+
125 61 124 1
|
| 274 |
+
126 62 125 1
|
| 275 |
+
127 63 126 1
|
| 276 |
+
128 66 127 1
|
| 277 |
+
129 67 128 1
|
| 278 |
+
130 67 129 1
|
| 279 |
+
131 68 130 1
|
| 280 |
+
132 68 131 1
|
| 281 |
+
133 68 132 1
|
| 282 |
+
134 69 133 1
|
| 283 |
+
135 69 134 1
|
| 284 |
+
136 69 135 1
|
| 285 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 286 |
+
1 ILE 1
|
| 287 |
+
|
1fo0/1fo0_ligand.sdf
ADDED
|
@@ -0,0 +1,281 @@
|
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|
|
|
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|
|
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|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
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|
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|
|
|
|
| 1 |
+
1fo0_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
137138 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
26.6090 42.0530 46.0620 N 0 3 0 0 0
|
| 6 |
+
26.3900 40.6410 46.4320 C 0 0 0 0 0
|
| 7 |
+
24.9150 40.3210 46.6720 C 0 0 0 0 0
|
| 8 |
+
24.1470 41.1170 47.1870 O 0 0 0 0 0
|
| 9 |
+
27.1940 40.2640 47.6880 C 0 0 0 0 0
|
| 10 |
+
26.7320 41.1110 48.8660 C 0 0 0 0 0
|
| 11 |
+
28.6480 40.5650 47.3730 C 0 0 0 0 0
|
| 12 |
+
27.4910 40.8010 50.1280 C 0 0 0 0 0
|
| 13 |
+
24.5470 39.1220 46.2520 N 0 0 0 0 0
|
| 14 |
+
23.2090 38.5980 46.3130 C 0 0 0 0 0
|
| 15 |
+
22.7560 38.3920 47.7400 C 0 0 0 0 0
|
| 16 |
+
23.4640 38.5930 48.7080 O 0 0 0 0 0
|
| 17 |
+
23.1280 37.2960 45.5000 C 0 0 0 0 0
|
| 18 |
+
21.7500 36.9800 44.9770 C 0 0 0 0 0
|
| 19 |
+
20.7520 37.6250 45.3150 O 0 0 0 0 0
|
| 20 |
+
21.5940 35.9800 44.1290 N 0 0 0 0 0
|
| 21 |
+
21.5160 37.9820 47.8940 N 0 0 0 0 0
|
| 22 |
+
20.9270 37.7010 49.2180 C 0 0 0 0 0
|
| 23 |
+
20.8690 36.2110 49.4980 C 0 0 0 0 0
|
| 24 |
+
21.0020 35.3470 48.6110 O 0 0 0 0 0
|
| 25 |
+
19.5320 38.2860 49.1190 C 0 0 0 0 0
|
| 26 |
+
18.5490 38.0700 50.1990 C 0 0 0 0 0
|
| 27 |
+
18.5890 38.7000 51.4260 C 0 0 0 0 0
|
| 28 |
+
17.4760 37.2240 49.9150 C 0 0 0 0 0
|
| 29 |
+
17.6060 38.4910 52.3810 C 0 0 0 0 0
|
| 30 |
+
16.4950 37.0260 50.8500 C 0 0 0 0 0
|
| 31 |
+
16.5580 37.6470 52.0750 C 0 0 0 0 0
|
| 32 |
+
20.6770 35.8650 50.7500 N 0 0 0 0 0
|
| 33 |
+
20.5230 34.5070 51.2770 C 0 0 0 0 0
|
| 34 |
+
19.0130 34.2040 51.3840 C 0 0 0 0 0
|
| 35 |
+
18.3460 34.6060 52.3490 O 0 0 0 0 0
|
| 36 |
+
21.0060 34.4810 52.7520 C 0 0 0 0 0
|
| 37 |
+
22.5300 34.4940 52.7060 C 0 0 0 0 0
|
| 38 |
+
23.1100 35.4850 53.1840 O 0 0 0 0 0
|
| 39 |
+
23.0620 33.5170 52.1310 O 0 0 0 0 0
|
| 40 |
+
18.5620 33.5270 50.3400 N 0 0 0 0 0
|
| 41 |
+
17.1940 33.1490 50.1560 C 0 0 0 0 0
|
| 42 |
+
16.7390 31.9970 51.0390 C 0 0 0 0 0
|
| 43 |
+
17.3310 30.9160 51.0680 O 0 0 0 0 0
|
| 44 |
+
16.9030 32.7220 48.6960 C 0 0 0 0 0
|
| 45 |
+
17.0350 33.8660 47.7330 C 0 0 0 0 0
|
| 46 |
+
15.9770 34.7580 47.5170 C 0 0 0 0 0
|
| 47 |
+
18.2300 34.0940 47.0730 C 0 0 0 0 0
|
| 48 |
+
16.1010 35.8180 46.6680 C 0 0 0 0 0
|
| 49 |
+
18.3640 35.1770 46.2250 C 0 0 0 0 0
|
| 50 |
+
17.3000 36.0280 46.0050 C 0 0 0 0 0
|
| 51 |
+
15.6360 32.2320 51.7320 N 0 0 0 0 0
|
| 52 |
+
15.0050 31.2030 52.5320 C 0 0 0 0 0
|
| 53 |
+
14.0900 30.4340 51.5950 C 0 0 0 0 0
|
| 54 |
+
14.2190 30.5940 50.3620 O 0 0 0 0 0
|
| 55 |
+
14.2430 31.8510 53.6740 C 0 0 0 0 0
|
| 56 |
+
15.0170 31.6430 54.9730 C 0 0 0 0 0
|
| 57 |
+
15.6930 30.6110 55.0810 O 0 0 0 0 0
|
| 58 |
+
14.9040 32.6060 55.8720 N 0 0 0 0 0
|
| 59 |
+
13.1720 29.6070 52.0800 N 0 0 0 0 0
|
| 60 |
+
12.3740 28.8710 51.0920 C 0 0 0 0 0
|
| 61 |
+
10.9470 29.3340 51.1720 C 0 0 0 0 0
|
| 62 |
+
10.5520 30.0140 52.1020 O 0 0 0 0 0
|
| 63 |
+
12.4300 27.3630 51.4010 C 0 0 0 0 0
|
| 64 |
+
11.9520 27.1150 52.7340 O 0 0 0 0 0
|
| 65 |
+
13.8590 26.8490 51.3130 C 0 0 0 0 0
|
| 66 |
+
10.1320 28.8830 50.2510 N 0 0 0 0 0
|
| 67 |
+
8.7150 29.2240 50.2880 C 0 0 0 0 0
|
| 68 |
+
7.9020 28.0610 50.9070 C 0 0 0 0 0
|
| 69 |
+
6.6350 28.2370 50.9000 O 0 0 0 0 0
|
| 70 |
+
8.2020 29.3430 48.8380 C 0 0 0 0 0
|
| 71 |
+
8.4090 27.9650 48.1820 C 0 0 0 0 0
|
| 72 |
+
8.8490 30.4480 48.0920 C 0 0 0 0 0
|
| 73 |
+
7.8290 27.9670 46.8190 C 0 0 0 0 0
|
| 74 |
+
8.5440 27.0430 51.3010 O 0 0 0 0 0
|
| 75 |
+
27.6052 42.2137 45.9135 H 0 0 0 0 0
|
| 76 |
+
26.0981 42.2616 45.2042 H 0 0 0 0 0
|
| 77 |
+
26.2744 42.6560 46.8136 H 0 0 0 0 0
|
| 78 |
+
26.7354 40.0512 45.5829 H 0 0 0 0 0
|
| 79 |
+
27.0557 39.2152 47.9507 H 0 0 0 0 0
|
| 80 |
+
25.6786 40.8949 49.0442 H 0 0 0 0 0
|
| 81 |
+
26.9049 42.1580 48.6170 H 0 0 0 0 0
|
| 82 |
+
28.7528 41.6202 47.1206 H 0 0 0 0 0
|
| 83 |
+
29.2621 40.3357 48.2439 H 0 0 0 0 0
|
| 84 |
+
28.9695 39.9545 46.5292 H 0 0 0 0 0
|
| 85 |
+
27.3465 39.7527 50.3892 H 0 0 0 0 0
|
| 86 |
+
28.5519 40.9943 49.9692 H 0 0 0 0 0
|
| 87 |
+
27.1224 41.4323 50.9365 H 0 0 0 0 0
|
| 88 |
+
25.2690 38.5217 45.8535 H 0 0 0 0 0
|
| 89 |
+
22.5283 39.3272 45.8737 H 0 0 0 0 0
|
| 90 |
+
23.4140 36.4821 46.1662 H 0 0 0 0 0
|
| 91 |
+
23.7810 37.4151 44.6354 H 0 0 0 0 0
|
| 92 |
+
20.6661 35.7563 43.7694 H 0 0 0 0 0
|
| 93 |
+
22.4014 35.4312 43.8335 H 0 0 0 0 0
|
| 94 |
+
20.9372 37.8528 47.0641 H 0 0 0 0 0
|
| 95 |
+
21.5131 38.1261 50.0328 H 0 0 0 0 0
|
| 96 |
+
19.0935 37.7881 48.2542 H 0 0 0 0 0
|
| 97 |
+
19.6933 39.3640 49.1152 H 0 0 0 0 0
|
| 98 |
+
19.4128 39.3779 51.6496 H 0 0 0 0 0
|
| 99 |
+
17.4187 36.7211 48.9496 H 0 0 0 0 0
|
| 100 |
+
17.6598 38.9826 53.3524 H 0 0 0 0 0
|
| 101 |
+
15.6558 36.3694 50.6206 H 0 0 0 0 0
|
| 102 |
+
15.7733 37.4712 52.8109 H 0 0 0 0 0
|
| 103 |
+
20.6300 36.6243 51.4294 H 0 0 0 0 0
|
| 104 |
+
21.0684 33.8138 50.6366 H 0 0 0 0 0
|
| 105 |
+
20.6378 33.5947 53.2687 H 0 0 0 0 0
|
| 106 |
+
20.6239 35.3398 53.3040 H 0 0 0 0 0
|
| 107 |
+
22.3812 32.8962 51.8614 H 0 0 0 0 0
|
| 108 |
+
19.2326 33.2573 49.6203 H 0 0 0 0 0
|
| 109 |
+
16.6447 34.0498 50.4297 H 0 0 0 0 0
|
| 110 |
+
15.8777 32.3552 48.6481 H 0 0 0 0 0
|
| 111 |
+
17.6277 31.9576 48.4156 H 0 0 0 0 0
|
| 112 |
+
15.0332 34.6014 48.0393 H 0 0 0 0 0
|
| 113 |
+
19.0700 33.4157 47.2229 H 0 0 0 0 0
|
| 114 |
+
15.2621 36.4962 46.5117 H 0 0 0 0 0
|
| 115 |
+
19.3160 35.3602 45.7268 H 0 0 0 0 0
|
| 116 |
+
17.4022 36.8629 45.3118 H 0 0 0 0 0
|
| 117 |
+
15.2194 33.1626 51.7017 H 0 0 0 0 0
|
| 118 |
+
15.7269 30.5217 52.9824 H 0 0 0 0 0
|
| 119 |
+
13.2553 31.3979 53.7593 H 0 0 0 0 0
|
| 120 |
+
14.1308 32.9179 53.4810 H 0 0 0 0 0
|
| 121 |
+
15.4042 32.5375 56.7583 H 0 0 0 0 0
|
| 122 |
+
14.3167 33.4173 55.6792 H 0 0 0 0 0
|
| 123 |
+
13.0291 29.4895 53.0831 H 0 0 0 0 0
|
| 124 |
+
12.7722 29.0534 50.0939 H 0 0 0 0 0
|
| 125 |
+
11.8057 26.8503 50.6693 H 0 0 0 0 0
|
| 126 |
+
11.9909 26.1733 52.9167 H 0 0 0 0 0
|
| 127 |
+
14.2431 27.0177 50.3070 H 0 0 0 0 0
|
| 128 |
+
14.4800 27.3804 52.0342 H 0 0 0 0 0
|
| 129 |
+
13.8743 25.7820 51.5350 H 0 0 0 0 0
|
| 130 |
+
10.4910 28.2895 49.5032 H 0 0 0 0 0
|
| 131 |
+
8.5992 30.1440 50.8610 H 0 0 0 0 0
|
| 132 |
+
6.4358 29.1064 50.5450 H 0 0 0 0 0
|
| 133 |
+
7.1447 29.6077 48.8256 H 0 0 0 0 0
|
| 134 |
+
7.9152 27.2015 48.7831 H 0 0 0 0 0
|
| 135 |
+
9.4761 27.7518 48.1196 H 0 0 0 0 0
|
| 136 |
+
8.6473 31.3926 48.5970 H 0 0 0 0 0
|
| 137 |
+
9.9249 30.2776 48.0535 H 0 0 0 0 0
|
| 138 |
+
8.4490 30.4836 47.0787 H 0 0 0 0 0
|
| 139 |
+
6.7621 28.1817 46.8799 H 0 0 0 0 0
|
| 140 |
+
8.3209 28.7312 46.2173 H 0 0 0 0 0
|
| 141 |
+
7.9787 26.9896 46.3604 H 0 0 0 0 0
|
| 142 |
+
2 1 1 0 0 0
|
| 143 |
+
2 5 1 0 0 0
|
| 144 |
+
3 2 1 0 0 0
|
| 145 |
+
3 4 2 0 0 0
|
| 146 |
+
5 7 1 0 0 0
|
| 147 |
+
5 6 1 0 0 0
|
| 148 |
+
6 8 1 0 0 0
|
| 149 |
+
10 9 1 0 0 0
|
| 150 |
+
10 13 1 0 0 0
|
| 151 |
+
11 10 1 0 0 0
|
| 152 |
+
11 12 2 0 0 0
|
| 153 |
+
13 14 1 0 0 0
|
| 154 |
+
14 16 1 0 0 0
|
| 155 |
+
14 15 2 0 0 0
|
| 156 |
+
9 3 1 0 0 0
|
| 157 |
+
18 17 1 0 0 0
|
| 158 |
+
18 21 1 0 0 0
|
| 159 |
+
19 18 1 0 0 0
|
| 160 |
+
19 20 2 0 0 0
|
| 161 |
+
21 22 1 0 0 0
|
| 162 |
+
22 23 4 0 0 0
|
| 163 |
+
22 24 4 0 0 0
|
| 164 |
+
24 26 4 0 0 0
|
| 165 |
+
26 27 4 0 0 0
|
| 166 |
+
25 27 4 0 0 0
|
| 167 |
+
23 25 4 0 0 0
|
| 168 |
+
17 11 1 0 0 0
|
| 169 |
+
29 28 1 0 0 0
|
| 170 |
+
29 32 1 0 0 0
|
| 171 |
+
30 29 1 0 0 0
|
| 172 |
+
30 31 2 0 0 0
|
| 173 |
+
32 33 1 0 0 0
|
| 174 |
+
33 34 2 0 0 0
|
| 175 |
+
33 35 1 0 0 0
|
| 176 |
+
28 19 1 0 0 0
|
| 177 |
+
37 36 1 0 0 0
|
| 178 |
+
37 40 1 0 0 0
|
| 179 |
+
38 37 1 0 0 0
|
| 180 |
+
38 39 2 0 0 0
|
| 181 |
+
40 41 1 0 0 0
|
| 182 |
+
41 42 4 0 0 0
|
| 183 |
+
41 43 4 0 0 0
|
| 184 |
+
43 45 4 0 0 0
|
| 185 |
+
45 46 4 0 0 0
|
| 186 |
+
44 46 4 0 0 0
|
| 187 |
+
42 44 4 0 0 0
|
| 188 |
+
36 30 1 0 0 0
|
| 189 |
+
48 47 1 0 0 0
|
| 190 |
+
48 51 1 0 0 0
|
| 191 |
+
49 48 1 0 0 0
|
| 192 |
+
49 50 2 0 0 0
|
| 193 |
+
51 52 1 0 0 0
|
| 194 |
+
52 54 1 0 0 0
|
| 195 |
+
52 53 2 0 0 0
|
| 196 |
+
47 38 1 0 0 0
|
| 197 |
+
56 55 1 0 0 0
|
| 198 |
+
56 59 1 0 0 0
|
| 199 |
+
57 56 1 0 0 0
|
| 200 |
+
57 58 2 0 0 0
|
| 201 |
+
59 61 1 0 0 0
|
| 202 |
+
59 60 1 0 0 0
|
| 203 |
+
55 49 1 0 0 0
|
| 204 |
+
62 63 1 0 0 0
|
| 205 |
+
63 66 1 0 0 0
|
| 206 |
+
63 64 1 0 0 0
|
| 207 |
+
64 65 1 0 0 0
|
| 208 |
+
64 70 2 0 0 0
|
| 209 |
+
66 68 1 0 0 0
|
| 210 |
+
66 67 1 0 0 0
|
| 211 |
+
67 69 1 0 0 0
|
| 212 |
+
57 62 1 0 0 0
|
| 213 |
+
1 71 1 0 0 0
|
| 214 |
+
1 72 1 0 0 0
|
| 215 |
+
1 73 1 0 0 0
|
| 216 |
+
2 74 1 0 0 0
|
| 217 |
+
5 75 1 0 0 0
|
| 218 |
+
6 76 1 0 0 0
|
| 219 |
+
6 77 1 0 0 0
|
| 220 |
+
7 78 1 0 0 0
|
| 221 |
+
7 79 1 0 0 0
|
| 222 |
+
7 80 1 0 0 0
|
| 223 |
+
8 81 1 0 0 0
|
| 224 |
+
8 82 1 0 0 0
|
| 225 |
+
8 83 1 0 0 0
|
| 226 |
+
9 84 1 0 0 0
|
| 227 |
+
10 85 1 0 0 0
|
| 228 |
+
13 86 1 0 0 0
|
| 229 |
+
13 87 1 0 0 0
|
| 230 |
+
16 88 1 0 0 0
|
| 231 |
+
16 89 1 0 0 0
|
| 232 |
+
17 90 1 0 0 0
|
| 233 |
+
18 91 1 0 0 0
|
| 234 |
+
21 92 1 0 0 0
|
| 235 |
+
21 93 1 0 0 0
|
| 236 |
+
23 94 1 0 0 0
|
| 237 |
+
24 95 1 0 0 0
|
| 238 |
+
25 96 1 0 0 0
|
| 239 |
+
26 97 1 0 0 0
|
| 240 |
+
27 98 1 0 0 0
|
| 241 |
+
28 99 1 0 0 0
|
| 242 |
+
29100 1 0 0 0
|
| 243 |
+
32101 1 0 0 0
|
| 244 |
+
32102 1 0 0 0
|
| 245 |
+
35103 1 0 0 0
|
| 246 |
+
36104 1 0 0 0
|
| 247 |
+
37105 1 0 0 0
|
| 248 |
+
40106 1 0 0 0
|
| 249 |
+
40107 1 0 0 0
|
| 250 |
+
42108 1 0 0 0
|
| 251 |
+
43109 1 0 0 0
|
| 252 |
+
44110 1 0 0 0
|
| 253 |
+
45111 1 0 0 0
|
| 254 |
+
46112 1 0 0 0
|
| 255 |
+
47113 1 0 0 0
|
| 256 |
+
48114 1 0 0 0
|
| 257 |
+
51115 1 0 0 0
|
| 258 |
+
51116 1 0 0 0
|
| 259 |
+
54117 1 0 0 0
|
| 260 |
+
54118 1 0 0 0
|
| 261 |
+
55119 1 0 0 0
|
| 262 |
+
56120 1 0 0 0
|
| 263 |
+
59121 1 0 0 0
|
| 264 |
+
60122 1 0 0 0
|
| 265 |
+
61123 1 0 0 0
|
| 266 |
+
61124 1 0 0 0
|
| 267 |
+
61125 1 0 0 0
|
| 268 |
+
62126 1 0 0 0
|
| 269 |
+
63127 1 0 0 0
|
| 270 |
+
65128 1 0 0 0
|
| 271 |
+
66129 1 0 0 0
|
| 272 |
+
67130 1 0 0 0
|
| 273 |
+
67131 1 0 0 0
|
| 274 |
+
68132 1 0 0 0
|
| 275 |
+
68133 1 0 0 0
|
| 276 |
+
68134 1 0 0 0
|
| 277 |
+
69135 1 0 0 0
|
| 278 |
+
69136 1 0 0 0
|
| 279 |
+
69137 1 0 0 0
|
| 280 |
+
M END
|
| 281 |
+
$$$$
|
1fo0/1fo0_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
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|
1fo0/1fo0_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
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|
1w12/1w12_ligand.mol2
ADDED
|
@@ -0,0 +1,173 @@
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|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:58 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1w12_ligand
|
| 7 |
+
77 80 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 N1 25.2970 17.0840 56.2410 N.am 1 SL1 -0.2182
|
| 14 |
+
2 C1 25.7400 18.3280 55.5940 C.3 1 SL1 0.1834
|
| 15 |
+
3 C2 24.6880 19.3460 55.7260 C.2 1 SL1 0.2445
|
| 16 |
+
4 O1 23.6040 18.9760 56.1720 O.2 1 SL1 -0.3791
|
| 17 |
+
5 N2 24.8680 20.6180 55.3640 N.am 1 SL1 -0.1903
|
| 18 |
+
6 C3 23.7650 21.5460 55.4330 C.3 1 SL1 0.1473
|
| 19 |
+
7 C4 22.7580 21.3020 54.3980 C.2 1 SL1 0.2075
|
| 20 |
+
8 O3 23.1740 20.7550 53.3500 O.2 1 SL1 -0.3940
|
| 21 |
+
9 N3 21.4840 21.6480 54.5870 N.am 1 SL1 -0.2647
|
| 22 |
+
10 C5 20.5970 21.5530 53.4700 C.3 1 SL1 0.1129
|
| 23 |
+
11 C6 20.1560 22.8210 52.9340 C.2 1 SL1 0.1245
|
| 24 |
+
12 O2 20.9390 23.7770 52.8400 O.2 1 SL1 -0.3725
|
| 25 |
+
13 C7 26.0870 21.0540 54.8980 C.ar 1 SL1 0.0955
|
| 26 |
+
14 C9 26.8440 20.3180 53.9050 C.ar 1 SL1 0.0380
|
| 27 |
+
15 C8 26.4380 19.0750 53.3570 C.2 1 SL1 0.0465
|
| 28 |
+
16 N4 25.9780 18.1710 54.1970 N.2 1 SL1 -0.3104
|
| 29 |
+
17 C10 26.5200 18.8070 51.9650 C.ar 1 SL1 0.0122
|
| 30 |
+
18 C11 26.1530 19.7670 50.9590 C.ar 1 SL1 -0.0435
|
| 31 |
+
19 C12 26.2890 19.5250 49.5700 C.ar 1 SL1 -0.0543
|
| 32 |
+
20 C13 26.7620 18.2500 49.1270 C.ar 1 SL1 -0.0556
|
| 33 |
+
21 C14 27.1390 17.2520 50.0760 C.ar 1 SL1 -0.0543
|
| 34 |
+
22 C15 26.9870 17.5470 51.4570 C.ar 1 SL1 -0.0435
|
| 35 |
+
23 C16 28.0740 20.8980 53.4690 C.ar 1 SL1 -0.0552
|
| 36 |
+
24 C17 28.5570 22.1390 53.9610 C.ar 1 SL1 -0.0685
|
| 37 |
+
25 C18 27.8390 22.8070 54.9830 C.ar 1 SL1 -0.0681
|
| 38 |
+
26 C19 26.6000 22.2800 55.4260 C.ar 1 SL1 -0.0309
|
| 39 |
+
27 C20 19.2740 20.7470 53.7080 C.3 1 SL1 -0.0105
|
| 40 |
+
28 C21 19.6870 19.3040 54.1100 C.3 1 SL1 -0.0155
|
| 41 |
+
29 C22 18.5020 18.4070 54.5370 C.3 1 SL1 0.0627
|
| 42 |
+
30 N5 18.9480 17.0250 54.4910 N.pl3 1 SL1 -0.2723
|
| 43 |
+
31 C23 18.1210 16.0090 54.8330 C.cat 1 SL1 0.2882
|
| 44 |
+
32 N6 16.8230 16.2240 55.1810 N.pl3 1 SL1 -0.2849
|
| 45 |
+
33 N7 18.5150 14.7280 54.8560 N.pl3 1 SL1 -0.2849
|
| 46 |
+
34 S 26.5140 16.3840 57.1650 S.o2 1 SL1 0.0517
|
| 47 |
+
35 O4 27.8300 16.7990 56.4970 O.2 1 SL1 -0.1532
|
| 48 |
+
36 O5 26.3280 14.9000 57.0820 O.2 1 SL1 -0.1532
|
| 49 |
+
37 C24 26.6830 16.7860 58.8660 C.3 1 SL1 0.1181
|
| 50 |
+
38 C25 26.7880 18.2650 58.8010 C.ar 1 SL1 -0.0204
|
| 51 |
+
39 C26 27.9640 18.9690 58.3960 C.ar 1 SL1 -0.0587
|
| 52 |
+
40 C27 28.0420 20.3970 58.3760 C.ar 1 SL1 -0.0685
|
| 53 |
+
41 C28 26.8990 21.1280 58.7920 C.ar 1 SL1 -0.0687
|
| 54 |
+
42 C29 25.6810 20.4620 59.1180 C.ar 1 SL1 -0.0685
|
| 55 |
+
43 C30 25.6610 19.0430 59.1550 C.ar 1 SL1 -0.0587
|
| 56 |
+
44 H1 24.3791 16.6995 56.1427 H 1 SL1 0.1712
|
| 57 |
+
45 H2 26.6624 18.6730 56.0840 H 1 SL1 0.0873
|
| 58 |
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46 H3 24.1555 22.5671 55.3108 H 1 SL1 0.0840
|
| 59 |
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47 H4 23.2866 21.4519 56.4190 H 1 SL1 0.0840
|
| 60 |
+
48 H5 21.1604 21.9630 55.4792 H 1 SL1 0.1884
|
| 61 |
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49 H6 21.1654 21.0343 52.6840 H 1 SL1 0.0790
|
| 62 |
+
50 H7 19.1232 22.9376 52.6089 H 1 SL1 0.1373
|
| 63 |
+
51 H8 25.7529 20.7222 51.2793 H 1 SL1 0.0683
|
| 64 |
+
52 H9 26.0376 20.2968 48.8515 H 1 SL1 0.0635
|
| 65 |
+
53 H10 26.8346 18.0404 48.0659 H 1 SL1 0.0669
|
| 66 |
+
54 H11 27.5307 16.2949 49.7512 H 1 SL1 0.0635
|
| 67 |
+
55 H12 27.2392 16.7728 52.1726 H 1 SL1 0.0683
|
| 68 |
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56 H13 28.6643 20.3678 52.7305 H 1 SL1 0.0644
|
| 69 |
+
57 H14 29.4661 22.5710 53.5586 H 1 SL1 0.0513
|
| 70 |
+
58 H15 28.2344 23.7152 55.4234 H 1 SL1 0.0633
|
| 71 |
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59 H16 26.0316 22.8154 56.1779 H 1 SL1 0.0526
|
| 72 |
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60 H17 18.6740 20.7252 52.7863 H 1 SL1 0.0314
|
| 73 |
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61 H18 18.6889 21.2112 54.5156 H 1 SL1 0.0314
|
| 74 |
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62 H19 20.3931 19.3678 54.9510 H 1 SL1 0.0301
|
| 75 |
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63 H20 20.1840 18.8337 53.2487 H 1 SL1 0.0301
|
| 76 |
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64 H21 17.6574 18.5501 53.8470 H 1 SL1 0.0689
|
| 77 |
+
65 H22 18.1880 18.6644 55.5593 H 1 SL1 0.0689
|
| 78 |
+
66 H23 19.9111 16.8143 54.1927 H 1 SL1 0.2642
|
| 79 |
+
67 H24 16.2198 15.4291 55.4361 H 1 SL1 0.2615
|
| 80 |
+
68 H25 16.4439 17.1817 55.1893 H 1 SL1 0.2615
|
| 81 |
+
69 H26 19.4834 14.4825 54.6054 H 1 SL1 0.2615
|
| 82 |
+
70 H27 17.8494 13.9892 55.1243 H 1 SL1 0.2615
|
| 83 |
+
71 H28 27.5884 16.3359 59.2990 H 1 SL1 0.0682
|
| 84 |
+
72 H29 25.8030 16.4690 59.4449 H 1 SL1 0.0682
|
| 85 |
+
73 H30 28.8329 18.3969 58.0913 H 1 SL1 0.0557
|
| 86 |
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74 H31 28.9443 20.9041 58.0538 H 1 SL1 0.0599
|
| 87 |
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75 H32 26.9526 22.2083 58.8630 H 1 SL1 0.0559
|
| 88 |
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76 H33 24.7839 21.0307 59.3343 H 1 SL1 0.0599
|
| 89 |
+
77 H34 24.7524 18.5393 59.4646 H 1 SL1 0.0557
|
| 90 |
+
@<TRIPOS>BOND
|
| 91 |
+
1 1 2 1
|
| 92 |
+
2 1 34 am
|
| 93 |
+
3 2 3 1
|
| 94 |
+
4 2 16 1
|
| 95 |
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5 3 4 2
|
| 96 |
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6 3 5 am
|
| 97 |
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|
| 98 |
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8 5 13 1
|
| 99 |
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|
| 100 |
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10 7 8 2
|
| 101 |
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11 7 9 am
|
| 102 |
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12 9 10 1
|
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|
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14 10 27 1
|
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|
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|
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|
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|
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|
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|
| 111 |
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|
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|
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|
| 114 |
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|
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|
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|
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|
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|
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|
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|
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|
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|
| 124 |
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|
| 125 |
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35 31 32 ar
|
| 126 |
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36 31 33 ar
|
| 127 |
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37 34 35 2
|
| 128 |
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|
| 129 |
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39 34 37 1
|
| 130 |
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40 37 38 1
|
| 131 |
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41 38 39 ar
|
| 132 |
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42 38 43 ar
|
| 133 |
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43 39 40 ar
|
| 134 |
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44 40 41 ar
|
| 135 |
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45 41 42 ar
|
| 136 |
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46 42 43 ar
|
| 137 |
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47 1 44 1
|
| 138 |
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48 2 45 1
|
| 139 |
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49 6 46 1
|
| 140 |
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|
| 141 |
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51 9 48 1
|
| 142 |
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52 10 49 1
|
| 143 |
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|
| 144 |
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|
| 145 |
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55 19 52 1
|
| 146 |
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56 20 53 1
|
| 147 |
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|
| 148 |
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|
| 149 |
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|
| 150 |
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|
| 151 |
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|
| 152 |
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|
| 153 |
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|
| 154 |
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|
| 155 |
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|
| 156 |
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66 28 63 1
|
| 157 |
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|
| 158 |
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|
| 159 |
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69 30 66 1
|
| 160 |
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|
| 161 |
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|
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|
| 163 |
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|
| 164 |
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|
| 165 |
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|
| 166 |
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|
| 167 |
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|
| 168 |
+
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|
| 169 |
+
79 42 76 1
|
| 170 |
+
80 43 77 1
|
| 171 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 172 |
+
1 SL1 1
|
| 173 |
+
|
1w12/1w12_ligand.sdf
ADDED
|
@@ -0,0 +1,161 @@
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
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|
|
|
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|
|
|
|
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|
|
|
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|
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|
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|
|
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|
|
|
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|
|
|
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|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
1w12_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
76 79 0 0 0 0 0 0 0 0999 V2000
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31 33 2 0 0 0
|
| 117 |
+
34 35 2 0 0 0
|
| 118 |
+
34 36 2 0 0 0
|
| 119 |
+
34 37 1 0 0 0
|
| 120 |
+
37 38 1 0 0 0
|
| 121 |
+
38 39 4 0 0 0
|
| 122 |
+
38 43 4 0 0 0
|
| 123 |
+
39 40 4 0 0 0
|
| 124 |
+
40 41 4 0 0 0
|
| 125 |
+
41 42 4 0 0 0
|
| 126 |
+
42 43 4 0 0 0
|
| 127 |
+
1 44 1 0 0 0
|
| 128 |
+
2 45 1 0 0 0
|
| 129 |
+
6 46 1 0 0 0
|
| 130 |
+
6 47 1 0 0 0
|
| 131 |
+
9 48 1 0 0 0
|
| 132 |
+
10 49 1 0 0 0
|
| 133 |
+
11 50 1 0 0 0
|
| 134 |
+
18 51 1 0 0 0
|
| 135 |
+
19 52 1 0 0 0
|
| 136 |
+
20 53 1 0 0 0
|
| 137 |
+
21 54 1 0 0 0
|
| 138 |
+
22 55 1 0 0 0
|
| 139 |
+
23 56 1 0 0 0
|
| 140 |
+
24 57 1 0 0 0
|
| 141 |
+
25 58 1 0 0 0
|
| 142 |
+
26 59 1 0 0 0
|
| 143 |
+
27 60 1 0 0 0
|
| 144 |
+
27 61 1 0 0 0
|
| 145 |
+
28 62 1 0 0 0
|
| 146 |
+
28 63 1 0 0 0
|
| 147 |
+
29 64 1 0 0 0
|
| 148 |
+
29 65 1 0 0 0
|
| 149 |
+
30 66 1 0 0 0
|
| 150 |
+
32 67 1 0 0 0
|
| 151 |
+
32 68 1 0 0 0
|
| 152 |
+
33 69 1 0 0 0
|
| 153 |
+
37 70 1 0 0 0
|
| 154 |
+
37 71 1 0 0 0
|
| 155 |
+
39 72 1 0 0 0
|
| 156 |
+
40 73 1 0 0 0
|
| 157 |
+
41 74 1 0 0 0
|
| 158 |
+
42 75 1 0 0 0
|
| 159 |
+
43 76 1 0 0 0
|
| 160 |
+
M END
|
| 161 |
+
$$$$
|
1w12/1w12_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1w12/1w12_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1we2/1we2_ligand.mol2
ADDED
|
@@ -0,0 +1,58 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:53 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1we2_ligand
|
| 7 |
+
21 21 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 C2 26.4290 33.2040 30.5960 C.2 1 DHK -0.0472
|
| 14 |
+
2 C3 26.8270 34.4880 29.8570 C.3 1 DHK 0.1076
|
| 15 |
+
3 O3 26.4230 34.3770 28.4570 O.3 1 DHK -0.3778
|
| 16 |
+
4 C4 26.1820 35.7480 30.3530 C.3 1 DHK 0.1166
|
| 17 |
+
5 O4 26.2460 36.6930 29.2460 O.3 1 DHK -0.3844
|
| 18 |
+
6 C5 24.7490 35.4660 30.6760 C.3 1 DHK 0.0919
|
| 19 |
+
7 C1 25.4110 33.2580 31.5350 C.2 1 DHK -0.0210
|
| 20 |
+
8 C6 24.7510 34.4860 31.8360 C.3 1 DHK 0.0034
|
| 21 |
+
9 C 24.9920 32.0690 32.2090 C.2 1 DHK 0.0477
|
| 22 |
+
10 O1 25.8670 31.1210 32.4560 O.co2 1 DHK -0.5666
|
| 23 |
+
11 O2 23.7350 32.0920 32.5010 O.co2 1 DHK -0.5666
|
| 24 |
+
12 O5 24.0790 36.7190 31.1310 O.3 1 DHK -0.3873
|
| 25 |
+
13 H1 26.9384 32.2647 30.3861 H 1 DHK 0.0592
|
| 26 |
+
14 H2 27.9192 34.5975 29.9284 H 1 DHK 0.0775
|
| 27 |
+
15 H3 26.6672 35.1699 27.9943 H 1 DHK 0.2132
|
| 28 |
+
16 H4 26.7056 36.1393 31.2377 H 1 DHK 0.0671
|
| 29 |
+
17 H5 25.7776 36.3373 28.5000 H 1 DHK 0.2103
|
| 30 |
+
18 H6 24.2277 35.0460 29.8032 H 1 DHK 0.0640
|
| 31 |
+
19 H7 23.7084 34.2646 32.1080 H 1 DHK 0.0411
|
| 32 |
+
20 H8 25.2608 34.9563 32.6898 H 1 DHK 0.0411
|
| 33 |
+
21 H9 24.0671 37.3471 30.4184 H 1 DHK 0.2101
|
| 34 |
+
@<TRIPOS>BOND
|
| 35 |
+
1 1 2 1
|
| 36 |
+
2 1 7 2
|
| 37 |
+
3 2 3 1
|
| 38 |
+
4 2 4 1
|
| 39 |
+
5 4 5 1
|
| 40 |
+
6 4 6 1
|
| 41 |
+
7 6 8 1
|
| 42 |
+
8 6 12 1
|
| 43 |
+
9 7 8 1
|
| 44 |
+
10 7 9 1
|
| 45 |
+
11 9 10 ar
|
| 46 |
+
12 9 11 ar
|
| 47 |
+
13 1 13 1
|
| 48 |
+
14 2 14 1
|
| 49 |
+
15 3 15 1
|
| 50 |
+
16 4 16 1
|
| 51 |
+
17 5 17 1
|
| 52 |
+
18 6 18 1
|
| 53 |
+
19 8 19 1
|
| 54 |
+
20 8 20 1
|
| 55 |
+
21 12 21 1
|
| 56 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 57 |
+
1 DHK 1
|
| 58 |
+
|
1we2/1we2_ligand.sdf
ADDED
|
@@ -0,0 +1,50 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
1we2_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
22 22 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
26.4290 33.2040 30.5960 C 0 0 0 0 0
|
| 6 |
+
26.8270 34.4880 29.8570 C 0 0 0 0 0
|
| 7 |
+
26.4230 34.3770 28.4570 O 0 0 0 0 0
|
| 8 |
+
26.1820 35.7480 30.3530 C 0 0 0 0 0
|
| 9 |
+
26.2460 36.6930 29.2460 O 0 0 0 0 0
|
| 10 |
+
24.7490 35.4660 30.6760 C 0 0 0 0 0
|
| 11 |
+
25.4110 33.2580 31.5350 C 0 0 0 0 0
|
| 12 |
+
24.7510 34.4860 31.8360 C 0 0 0 0 0
|
| 13 |
+
24.9920 32.0690 32.2090 C 0 0 0 0 0
|
| 14 |
+
25.8670 31.1210 32.4560 O 0 0 0 0 0
|
| 15 |
+
23.7350 32.0920 32.5010 O 0 0 0 0 0
|
| 16 |
+
24.0790 36.7190 31.1310 O 0 0 0 0 0
|
| 17 |
+
26.9389 32.2638 30.3859 H 0 0 0 0 0
|
| 18 |
+
27.9018 34.5691 30.0190 H 0 0 0 0 0
|
| 19 |
+
26.8062 33.5833 28.0765 H 0 0 0 0 0
|
| 20 |
+
26.6754 36.1353 31.2444 H 0 0 0 0 0
|
| 21 |
+
27.1646 36.8763 29.0359 H 0 0 0 0 0
|
| 22 |
+
24.2268 35.0740 29.8032 H 0 0 0 0 0
|
| 23 |
+
23.7128 34.2530 32.0725 H 0 0 0 0 0
|
| 24 |
+
25.2862 34.9541 32.6621 H 0 0 0 0 0
|
| 25 |
+
26.7268 31.3855 32.1209 H 0 0 0 0 0
|
| 26 |
+
24.0670 37.3537 30.4109 H 0 0 0 0 0
|
| 27 |
+
1 2 1 0 0 0
|
| 28 |
+
1 7 2 0 0 0
|
| 29 |
+
2 3 1 0 0 0
|
| 30 |
+
2 4 1 0 0 0
|
| 31 |
+
4 5 1 0 0 0
|
| 32 |
+
4 6 1 0 0 0
|
| 33 |
+
6 8 1 0 0 0
|
| 34 |
+
6 12 1 0 0 0
|
| 35 |
+
7 8 1 0 0 0
|
| 36 |
+
7 9 1 0 0 0
|
| 37 |
+
9 10 1 0 0 0
|
| 38 |
+
9 11 2 0 0 0
|
| 39 |
+
1 13 1 0 0 0
|
| 40 |
+
2 14 1 0 0 0
|
| 41 |
+
3 15 1 0 0 0
|
| 42 |
+
4 16 1 0 0 0
|
| 43 |
+
5 17 1 0 0 0
|
| 44 |
+
6 18 1 0 0 0
|
| 45 |
+
8 19 1 0 0 0
|
| 46 |
+
8 20 1 0 0 0
|
| 47 |
+
10 21 1 0 0 0
|
| 48 |
+
12 22 1 0 0 0
|
| 49 |
+
M END
|
| 50 |
+
$$$$
|
1we2/1we2_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1we2/1we2_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1wn6/1wn6_ligand.mol2
ADDED
|
@@ -0,0 +1,139 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:53 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1wn6_ligand
|
| 7 |
+
61 62 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 O4 46.6990 17.2620 36.2980 O.co2 1 BST -0.5661
|
| 14 |
+
2 N1 43.4550 14.7250 38.7110 N.am 1 BST -0.1061
|
| 15 |
+
3 C2 42.4780 13.7010 38.3580 C.2 1 BST 0.3336
|
| 16 |
+
4 O2 41.4790 13.9360 37.6870 O.2 1 BST -0.3681
|
| 17 |
+
5 N3 42.7060 12.3840 38.8200 N.am 1 BST -0.2605
|
| 18 |
+
6 C4 43.8920 12.1000 39.6210 C.3 1 BST 0.1230
|
| 19 |
+
7 C5 44.8850 13.2150 39.9610 C.2 1 BST 0.0137
|
| 20 |
+
8 C6 44.6230 14.4350 39.5010 C.2 1 BST 0.1234
|
| 21 |
+
9 C1' 43.1930 16.1080 38.2030 C.3 1 BST 0.2208
|
| 22 |
+
10 C2' 42.7350 17.1080 39.2230 C.2 1 BST -0.0298
|
| 23 |
+
11 C3' 43.1900 18.3810 39.3190 C.2 1 BST -0.0640
|
| 24 |
+
12 C4' 44.2990 18.7230 38.2380 C.3 1 BST 0.0973
|
| 25 |
+
13 C5' 44.3650 17.7800 37.0000 C.3 1 BST 0.1460
|
| 26 |
+
14 O5' 44.4280 16.4620 37.5430 O.3 1 BST -0.3112
|
| 27 |
+
15 O3 45.4530 18.5870 35.0040 O.co2 1 BST -0.5661
|
| 28 |
+
16 C6' 45.6320 17.7910 36.1400 C.2 1 BST 0.0681
|
| 29 |
+
17 N6 44.1420 20.1030 37.7560 N.am 1 BST -0.2716
|
| 30 |
+
18 C7 45.0600 21.1620 37.6990 C.2 1 BST 0.1834
|
| 31 |
+
19 O7 46.2230 21.0070 38.0990 O.2 1 BST -0.3967
|
| 32 |
+
20 C8 44.5420 22.4810 37.1220 C.3 1 BST 0.0802
|
| 33 |
+
21 C9 45.3450 23.7450 37.5380 C.3 1 BST -0.0042
|
| 34 |
+
22 N9 46.7640 23.7470 37.1480 N.4 1 BST 0.2225
|
| 35 |
+
23 C10 44.6930 25.0390 36.9530 C.3 1 BST 0.0256
|
| 36 |
+
24 C11 43.7650 25.7790 37.9600 C.3 1 BST 0.0698
|
| 37 |
+
25 N12 43.0250 26.9150 37.3940 N.pl3 1 BST -0.2622
|
| 38 |
+
26 C13 43.7320 28.1980 37.2870 C.3 1 BST 0.0537
|
| 39 |
+
27 C14 41.6780 26.7580 36.9520 C.cat 1 BST 0.2901
|
| 40 |
+
28 N14 40.8710 27.9390 37.0420 N.pl3 1 BST -0.2848
|
| 41 |
+
29 N15 41.1290 25.6780 36.4910 N.pl3 1 BST -0.2848
|
| 42 |
+
30 N4 44.6870 11.0650 38.8750 N.4 1 BST 0.1583
|
| 43 |
+
31 O6 43.3620 11.5250 40.7980 O.3 1 BST -0.4133
|
| 44 |
+
32 H1 42.0597 11.6534 38.5995 H 1 BST 0.1704
|
| 45 |
+
33 H2 45.7738 13.0161 40.5580 H 1 BST 0.0476
|
| 46 |
+
34 H3 45.3163 15.2430 39.7300 H 1 BST 0.1777
|
| 47 |
+
35 H4 42.3947 16.0520 37.4483 H 1 BST 0.1174
|
| 48 |
+
36 H5 41.9806 16.7871 39.9398 H 1 BST 0.0511
|
| 49 |
+
37 H6 42.8319 19.0939 40.0602 H 1 BST 0.0476
|
| 50 |
+
38 H7 45.2693 18.6484 38.7507 H 1 BST 0.0725
|
| 51 |
+
39 H8 43.4783 17.9439 36.3700 H 1 BST 0.0814
|
| 52 |
+
40 H9 43.2293 20.3232 37.4117 H 1 BST 0.1880
|
| 53 |
+
41 H10 43.5021 22.6134 37.4553 H 1 BST 0.0559
|
| 54 |
+
42 H11 44.5688 22.4065 36.0249 H 1 BST 0.0559
|
| 55 |
+
43 H12 45.3038 23.8017 38.6358 H 1 BST 0.0877
|
| 56 |
+
44 H13 47.1969 24.6022 37.4599 H 1 BST 0.1998
|
| 57 |
+
45 H14 46.8369 23.6799 36.1449 H 1 BST 0.1998
|
| 58 |
+
46 H15 47.2302 22.9603 37.5721 H 1 BST 0.1998
|
| 59 |
+
47 H16 44.0972 24.7602 36.0713 H 1 BST 0.0356
|
| 60 |
+
48 H17 45.4962 25.7269 36.6503 H 1 BST 0.0356
|
| 61 |
+
49 H18 44.3864 26.1531 38.7870 H 1 BST 0.0692
|
| 62 |
+
50 H19 43.0346 25.0542 38.3488 H 1 BST 0.0692
|
| 63 |
+
51 H20 43.0605 28.9513 36.8493 H 1 BST 0.0653
|
| 64 |
+
52 H21 44.6161 28.0770 36.6438 H 1 BST 0.0653
|
| 65 |
+
53 H22 44.0489 28.5266 38.2878 H 1 BST 0.0653
|
| 66 |
+
54 H23 39.8855 27.9134 36.7435 H 1 BST 0.2615
|
| 67 |
+
55 H24 41.2765 28.8134 37.4052 H 1 BST 0.2615
|
| 68 |
+
56 H25 41.6814 24.8121 36.4135 H 1 BST 0.2615
|
| 69 |
+
57 H26 40.1403 25.6857 36.2022 H 1 BST 0.2615
|
| 70 |
+
58 H27 45.5191 10.8397 39.3974 H 1 BST 0.1958
|
| 71 |
+
59 H28 44.9458 11.4275 37.9708 H 1 BST 0.1958
|
| 72 |
+
60 H29 44.1292 10.2338 38.7567 H 1 BST 0.1958
|
| 73 |
+
61 H30 42.8594 12.1787 41.2699 H 1 BST 0.1881
|
| 74 |
+
@<TRIPOS>BOND
|
| 75 |
+
1 16 1 ar
|
| 76 |
+
2 2 3 am
|
| 77 |
+
3 2 8 1
|
| 78 |
+
4 9 2 1
|
| 79 |
+
5 3 4 2
|
| 80 |
+
6 3 5 am
|
| 81 |
+
7 5 6 1
|
| 82 |
+
8 7 6 1
|
| 83 |
+
9 6 30 1
|
| 84 |
+
10 6 31 1
|
| 85 |
+
11 8 7 2
|
| 86 |
+
12 9 10 1
|
| 87 |
+
13 14 9 1
|
| 88 |
+
14 11 10 2
|
| 89 |
+
15 12 11 1
|
| 90 |
+
16 13 12 1
|
| 91 |
+
17 12 17 1
|
| 92 |
+
18 13 14 1
|
| 93 |
+
19 13 16 1
|
| 94 |
+
20 16 15 ar
|
| 95 |
+
21 17 18 am
|
| 96 |
+
22 18 19 2
|
| 97 |
+
23 18 20 1
|
| 98 |
+
24 20 21 1
|
| 99 |
+
25 21 22 1
|
| 100 |
+
26 21 23 1
|
| 101 |
+
27 23 24 1
|
| 102 |
+
28 24 25 1
|
| 103 |
+
29 25 26 1
|
| 104 |
+
30 25 27 ar
|
| 105 |
+
31 27 28 ar
|
| 106 |
+
32 27 29 ar
|
| 107 |
+
33 5 32 1
|
| 108 |
+
34 7 33 1
|
| 109 |
+
35 8 34 1
|
| 110 |
+
36 9 35 1
|
| 111 |
+
37 10 36 1
|
| 112 |
+
38 11 37 1
|
| 113 |
+
39 12 38 1
|
| 114 |
+
40 13 39 1
|
| 115 |
+
41 17 40 1
|
| 116 |
+
42 20 41 1
|
| 117 |
+
43 20 42 1
|
| 118 |
+
44 21 43 1
|
| 119 |
+
45 22 44 1
|
| 120 |
+
46 22 45 1
|
| 121 |
+
47 22 46 1
|
| 122 |
+
48 23 47 1
|
| 123 |
+
49 23 48 1
|
| 124 |
+
50 24 49 1
|
| 125 |
+
51 24 50 1
|
| 126 |
+
52 26 51 1
|
| 127 |
+
53 26 52 1
|
| 128 |
+
54 26 53 1
|
| 129 |
+
55 28 54 1
|
| 130 |
+
56 28 55 1
|
| 131 |
+
57 29 56 1
|
| 132 |
+
58 29 57 1
|
| 133 |
+
59 30 58 1
|
| 134 |
+
60 30 59 1
|
| 135 |
+
61 30 60 1
|
| 136 |
+
62 31 61 1
|
| 137 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 138 |
+
1 BST 1
|
| 139 |
+
|
1wn6/1wn6_ligand.sdf
ADDED
|
@@ -0,0 +1,129 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
1wn6_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
61 62 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
46.6990 17.2620 36.2980 O 0 0 0 0 0
|
| 6 |
+
43.4550 14.7250 38.7110 N 0 0 0 0 0
|
| 7 |
+
42.4780 13.7010 38.3580 C 0 0 0 0 0
|
| 8 |
+
41.4790 13.9360 37.6870 O 0 0 0 0 0
|
| 9 |
+
42.7060 12.3840 38.8200 N 0 0 0 0 0
|
| 10 |
+
43.8920 12.1000 39.6210 C 0 0 0 0 0
|
| 11 |
+
44.8850 13.2150 39.9610 C 0 0 0 0 0
|
| 12 |
+
44.6230 14.4350 39.5010 C 0 0 0 0 0
|
| 13 |
+
43.1930 16.1080 38.2030 C 0 0 0 0 0
|
| 14 |
+
42.7350 17.1080 39.2230 C 0 0 0 0 0
|
| 15 |
+
43.1900 18.3810 39.3190 C 0 0 0 0 0
|
| 16 |
+
44.2990 18.7230 38.2380 C 0 0 0 0 0
|
| 17 |
+
44.3650 17.7800 37.0000 C 0 0 0 0 0
|
| 18 |
+
44.4280 16.4620 37.5430 O 0 0 0 0 0
|
| 19 |
+
45.4530 18.5870 35.0040 O 0 0 0 0 0
|
| 20 |
+
45.6320 17.7910 36.1400 C 0 0 0 0 0
|
| 21 |
+
44.1420 20.1030 37.7560 N 0 0 0 0 0
|
| 22 |
+
45.0600 21.1620 37.6990 C 0 0 0 0 0
|
| 23 |
+
46.2230 21.0070 38.0990 O 0 0 0 0 0
|
| 24 |
+
44.5420 22.4810 37.1220 C 0 0 0 0 0
|
| 25 |
+
45.3450 23.7450 37.5380 C 0 0 0 0 0
|
| 26 |
+
46.7640 23.7470 37.1480 N 0 3 0 0 0
|
| 27 |
+
44.6930 25.0390 36.9530 C 0 0 0 0 0
|
| 28 |
+
43.7650 25.7790 37.9600 C 0 0 0 0 0
|
| 29 |
+
43.0250 26.9150 37.3940 N 0 0 0 0 0
|
| 30 |
+
43.7320 28.1980 37.2870 C 0 0 0 0 0
|
| 31 |
+
41.6780 26.7580 36.9520 C 0 0 0 0 0
|
| 32 |
+
40.8710 27.9390 37.0420 N 0 0 0 0 0
|
| 33 |
+
41.1290 25.6780 36.4910 N 0 0 0 0 0
|
| 34 |
+
44.6870 11.0650 38.8750 N 0 3 0 0 0
|
| 35 |
+
43.3620 11.5250 40.7980 O 0 0 0 0 0
|
| 36 |
+
42.0468 11.6388 38.5951 H 0 0 0 0 0
|
| 37 |
+
45.7746 13.0159 40.5586 H 0 0 0 0 0
|
| 38 |
+
45.3170 15.2437 39.7302 H 0 0 0 0 0
|
| 39 |
+
42.3320 16.1228 37.5348 H 0 0 0 0 0
|
| 40 |
+
41.9799 16.7868 39.9405 H 0 0 0 0 0
|
| 41 |
+
42.8316 19.0946 40.0609 H 0 0 0 0 0
|
| 42 |
+
45.2346 18.5789 38.7784 H 0 0 0 0 0
|
| 43 |
+
43.5262 18.0947 36.3791 H 0 0 0 0 0
|
| 44 |
+
44.5624 18.9453 35.0028 H 0 0 0 0 0
|
| 45 |
+
43.2111 20.3276 37.4048 H 0 0 0 0 0
|
| 46 |
+
43.5295 22.6136 37.5033 H 0 0 0 0 0
|
| 47 |
+
44.6223 22.4016 36.0379 H 0 0 0 0 0
|
| 48 |
+
45.3086 23.7256 38.6272 H 0 0 0 0 0
|
| 49 |
+
47.2010 24.6127 37.4641 H 0 0 0 0 0
|
| 50 |
+
47.2346 22.9506 37.5777 H 0 0 0 0 0
|
| 51 |
+
46.8365 23.6790 36.1328 H 0 0 0 0 0
|
| 52 |
+
44.0802 24.7404 36.1024 H 0 0 0 0 0
|
| 53 |
+
45.5008 25.7220 36.6903 H 0 0 0 0 0
|
| 54 |
+
44.4054 26.1783 38.7465 H 0 0 0 0 0
|
| 55 |
+
43.0238 25.0551 38.2986 H 0 0 0 0 0
|
| 56 |
+
44.0455 28.5225 38.2792 H 0 0 0 0 0
|
| 57 |
+
44.6077 28.0767 36.6495 H 0 0 0 0 0
|
| 58 |
+
43.0656 28.9435 36.8532 H 0 0 0 0 0
|
| 59 |
+
39.8947 27.9133 36.7476 H 0 0 0 0 0
|
| 60 |
+
41.2729 28.8052 37.4005 H 0 0 0 0 0
|
| 61 |
+
41.6757 24.8202 36.4156 H 0 0 0 0 0
|
| 62 |
+
45.0699 11.4795 38.0253 H 0 0 0 0 0
|
| 63 |
+
45.4491 10.7325 39.4658 H 0 0 0 0 0
|
| 64 |
+
44.0796 10.2832 38.6296 H 0 0 0 0 0
|
| 65 |
+
42.8542 12.1855 41.2749 H 0 0 0 0 0
|
| 66 |
+
16 1 2 0 0 0
|
| 67 |
+
2 3 1 0 0 0
|
| 68 |
+
2 8 1 0 0 0
|
| 69 |
+
9 2 1 0 0 0
|
| 70 |
+
3 4 2 0 0 0
|
| 71 |
+
3 5 1 0 0 0
|
| 72 |
+
5 6 1 0 0 0
|
| 73 |
+
7 6 1 0 0 0
|
| 74 |
+
6 30 1 0 0 0
|
| 75 |
+
6 31 1 0 0 0
|
| 76 |
+
8 7 2 0 0 0
|
| 77 |
+
9 10 1 0 0 0
|
| 78 |
+
14 9 1 0 0 0
|
| 79 |
+
11 10 2 0 0 0
|
| 80 |
+
12 11 1 0 0 0
|
| 81 |
+
13 12 1 0 0 0
|
| 82 |
+
12 17 1 0 0 0
|
| 83 |
+
13 14 1 0 0 0
|
| 84 |
+
13 16 1 0 0 0
|
| 85 |
+
16 15 1 0 0 0
|
| 86 |
+
17 18 1 0 0 0
|
| 87 |
+
18 19 2 0 0 0
|
| 88 |
+
18 20 1 0 0 0
|
| 89 |
+
20 21 1 0 0 0
|
| 90 |
+
21 22 1 0 0 0
|
| 91 |
+
21 23 1 0 0 0
|
| 92 |
+
23 24 1 0 0 0
|
| 93 |
+
24 25 1 0 0 0
|
| 94 |
+
25 26 1 0 0 0
|
| 95 |
+
25 27 1 0 0 0
|
| 96 |
+
27 28 1 0 0 0
|
| 97 |
+
27 29 2 0 0 0
|
| 98 |
+
5 32 1 0 0 0
|
| 99 |
+
7 33 1 0 0 0
|
| 100 |
+
8 34 1 0 0 0
|
| 101 |
+
9 35 1 0 0 0
|
| 102 |
+
10 36 1 0 0 0
|
| 103 |
+
11 37 1 0 0 0
|
| 104 |
+
12 38 1 0 0 0
|
| 105 |
+
13 39 1 0 0 0
|
| 106 |
+
15 40 1 0 0 0
|
| 107 |
+
17 41 1 0 0 0
|
| 108 |
+
20 42 1 0 0 0
|
| 109 |
+
20 43 1 0 0 0
|
| 110 |
+
21 44 1 0 0 0
|
| 111 |
+
22 45 1 0 0 0
|
| 112 |
+
22 46 1 0 0 0
|
| 113 |
+
22 47 1 0 0 0
|
| 114 |
+
23 48 1 0 0 0
|
| 115 |
+
23 49 1 0 0 0
|
| 116 |
+
24 50 1 0 0 0
|
| 117 |
+
24 51 1 0 0 0
|
| 118 |
+
26 52 1 0 0 0
|
| 119 |
+
26 53 1 0 0 0
|
| 120 |
+
26 54 1 0 0 0
|
| 121 |
+
28 55 1 0 0 0
|
| 122 |
+
28 56 1 0 0 0
|
| 123 |
+
29 57 1 0 0 0
|
| 124 |
+
30 58 1 0 0 0
|
| 125 |
+
30 59 1 0 0 0
|
| 126 |
+
30 60 1 0 0 0
|
| 127 |
+
31 61 1 0 0 0
|
| 128 |
+
M END
|
| 129 |
+
$$$$
|
1wn6/1wn6_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1wn6/1wn6_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1xxe/1xxe_ligand.mol2
ADDED
|
@@ -0,0 +1,158 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:52 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1xxe_ligand
|
| 7 |
+
71 71 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 C3G -10.7240 3.1650 -2.7820 C.3 1 TUX 0.1228
|
| 14 |
+
2 C4G -11.1710 1.8330 -3.3560 C.3 1 TUX 0.1143
|
| 15 |
+
3 C5G -10.9630 0.7050 -2.3520 C.3 1 TUX 0.1102
|
| 16 |
+
4 C2G -9.2980 3.0660 -2.2750 C.3 1 TUX 0.0325
|
| 17 |
+
5 C1G -9.1520 1.9050 -1.2970 C.3 1 TUX 0.0559
|
| 18 |
+
6 O5G -9.5970 0.6650 -1.8880 O.3 1 TUX -0.3711
|
| 19 |
+
7 O3G -10.8290 4.1970 -3.7820 O.3 1 TUX -0.2703
|
| 20 |
+
8 O1A -12.7720 4.9120 -2.7680 O.2 1 TUX -0.3704
|
| 21 |
+
9 C1A -11.8010 5.2030 -3.4390 C.2 1 TUX 0.2341
|
| 22 |
+
10 C2A -11.6230 6.6290 -3.9360 C.3 1 TUX 0.0487
|
| 23 |
+
11 C3A -10.9370 7.4640 -2.8600 C.3 1 TUX -0.0348
|
| 24 |
+
12 C4A -11.6710 8.7850 -2.6500 C.3 1 TUX -0.0509
|
| 25 |
+
13 C5A -11.5000 9.7000 -3.8610 C.3 1 TUX -0.0529
|
| 26 |
+
14 C6A -12.6740 10.6740 -3.9810 C.3 1 TUX -0.0531
|
| 27 |
+
15 C7A -13.5280 10.3610 -5.2080 C.3 1 TUX -0.0531
|
| 28 |
+
16 C8A -13.0920 11.2100 -6.4000 C.3 1 TUX -0.0531
|
| 29 |
+
17 C9A -14.0600 11.0240 -7.5660 C.3 1 TUX -0.0531
|
| 30 |
+
18 CAA -13.7390 11.9950 -8.7010 C.3 1 TUX -0.0531
|
| 31 |
+
19 CBA -15.0210 12.6010 -9.2710 C.3 1 TUX -0.0531
|
| 32 |
+
20 CCA -16.0420 11.5080 -9.5780 C.3 1 TUX -0.0533
|
| 33 |
+
21 CDA -16.7790 11.8060 -10.8820 C.3 1 TUX -0.0559
|
| 34 |
+
22 CEA -17.7950 10.7070 -11.1850 C.3 1 TUX -0.0653
|
| 35 |
+
23 CZH -8.8780 4.3810 -1.6240 C.3 1 TUX 0.0466
|
| 36 |
+
24 CYH -7.3630 4.5070 -1.6620 C.2 1 TUX 0.1992
|
| 37 |
+
25 OYH -6.7950 4.7340 -2.7130 O.2 1 TUX -0.3970
|
| 38 |
+
26 NXH -6.7040 4.3670 -0.5460 N.am 1 TUX -0.1642
|
| 39 |
+
27 OXH -5.2730 4.5060 -0.5340 O.3 1 TUX -0.2717
|
| 40 |
+
28 O4G -12.5440 1.9060 -3.7150 O.3 1 TUX -0.3862
|
| 41 |
+
29 C6G -11.2680 -0.6490 -2.9600 C.3 1 TUX 0.0729
|
| 42 |
+
30 O6G -10.1260 -1.1870 -3.6110 O.3 1 TUX -0.3924
|
| 43 |
+
31 H1 -11.3806 3.4237 -1.9383 H 1 TUX 0.0681
|
| 44 |
+
32 H2 -10.5760 1.6186 -4.2560 H 1 TUX 0.0650
|
| 45 |
+
33 H3 -11.6323 0.8753 -1.4958 H 1 TUX 0.0646
|
| 46 |
+
34 H4 -8.6368 2.8781 -3.1338 H 1 TUX 0.0377
|
| 47 |
+
35 H5 -9.7557 2.1124 -0.4012 H 1 TUX 0.0565
|
| 48 |
+
36 H6 -8.0942 1.8071 -1.0117 H 1 TUX 0.0565
|
| 49 |
+
37 H7 -12.6078 7.0630 -4.1636 H 1 TUX 0.0518
|
| 50 |
+
38 H8 -11.0048 6.6251 -4.8458 H 1 TUX 0.0518
|
| 51 |
+
39 H9 -9.9021 7.6717 -3.1697 H 1 TUX 0.0291
|
| 52 |
+
40 H10 -10.9310 6.9006 -1.9153 H 1 TUX 0.0291
|
| 53 |
+
41 H11 -11.2639 9.2860 -1.7594 H 1 TUX 0.0267
|
| 54 |
+
42 H12 -12.7417 8.5825 -2.4996 H 1 TUX 0.0267
|
| 55 |
+
43 H13 -11.4476 9.0855 -4.7719 H 1 TUX 0.0265
|
| 56 |
+
44 H14 -10.5672 10.2725 -3.7507 H 1 TUX 0.0265
|
| 57 |
+
45 H15 -12.2829 11.6984 -4.0679 H 1 TUX 0.0265
|
| 58 |
+
46 H16 -13.2991 10.5954 -3.0793 H 1 TUX 0.0265
|
| 59 |
+
47 H17 -14.5822 10.5753 -4.9784 H 1 TUX 0.0265
|
| 60 |
+
48 H18 -13.4173 9.2967 -5.4630 H 1 TUX 0.0265
|
| 61 |
+
49 H19 -12.0831 10.9039 -6.7138 H 1 TUX 0.0265
|
| 62 |
+
50 H20 -13.0786 12.2697 -6.1051 H 1 TUX 0.0265
|
| 63 |
+
51 H21 -15.0862 11.2070 -7.2149 H 1 TUX 0.0265
|
| 64 |
+
52 H22 -13.9790 9.9929 -7.9405 H 1 TUX 0.0265
|
| 65 |
+
53 H23 -13.2087 11.4551 -9.4993 H 1 TUX 0.0265
|
| 66 |
+
54 H24 -13.0983 12.8019 -8.3158 H 1 TUX 0.0265
|
| 67 |
+
55 H25 -14.7833 13.1441 -10.1976 H 1 TUX 0.0265
|
| 68 |
+
56 H26 -15.4487 13.2990 -8.5363 H 1 TUX 0.0265
|
| 69 |
+
57 H27 -16.7709 11.4540 -8.7559 H 1 TUX 0.0265
|
| 70 |
+
58 H28 -15.5212 10.5435 -9.6703 H 1 TUX 0.0265
|
| 71 |
+
59 H29 -16.0509 11.8627 -11.7046 H 1 TUX 0.0263
|
| 72 |
+
60 H30 -17.3036 12.7684 -10.7896 H 1 TUX 0.0263
|
| 73 |
+
61 H31 -18.3154 10.9381 -12.1262 H 1 TUX 0.0230
|
| 74 |
+
62 H32 -18.5271 10.6485 -10.3661 H 1 TUX 0.0230
|
| 75 |
+
63 H33 -17.2745 9.7427 -11.2811 H 1 TUX 0.0230
|
| 76 |
+
64 H34 -9.2208 4.3982 -0.5789 H 1 TUX 0.0506
|
| 77 |
+
65 H35 -9.3292 5.2214 -2.1718 H 1 TUX 0.0506
|
| 78 |
+
66 H36 -7.1937 4.1629 0.3017 H 1 TUX 0.2216
|
| 79 |
+
67 H37 -4.9507 4.3754 0.3501 H 1 TUX 0.2490
|
| 80 |
+
68 H38 -12.6696 2.6098 -4.3406 H 1 TUX 0.2100
|
| 81 |
+
69 H39 -12.0805 -0.5386 -3.6932 H 1 TUX 0.0584
|
| 82 |
+
70 H40 -11.5845 -1.3376 -2.1627 H 1 TUX 0.0584
|
| 83 |
+
71 H41 -9.4220 -1.2881 -2.9811 H 1 TUX 0.2095
|
| 84 |
+
@<TRIPOS>BOND
|
| 85 |
+
1 1 2 1
|
| 86 |
+
2 1 4 1
|
| 87 |
+
3 1 7 1
|
| 88 |
+
4 1 31 1
|
| 89 |
+
5 2 3 1
|
| 90 |
+
6 2 28 1
|
| 91 |
+
7 2 32 1
|
| 92 |
+
8 3 6 1
|
| 93 |
+
9 3 29 1
|
| 94 |
+
10 3 33 1
|
| 95 |
+
11 4 5 1
|
| 96 |
+
12 4 23 1
|
| 97 |
+
13 4 34 1
|
| 98 |
+
14 5 6 1
|
| 99 |
+
15 5 35 1
|
| 100 |
+
16 5 36 1
|
| 101 |
+
17 7 9 1
|
| 102 |
+
18 9 8 2
|
| 103 |
+
19 9 10 1
|
| 104 |
+
20 10 11 1
|
| 105 |
+
21 10 37 1
|
| 106 |
+
22 10 38 1
|
| 107 |
+
23 11 12 1
|
| 108 |
+
24 11 39 1
|
| 109 |
+
25 11 40 1
|
| 110 |
+
26 12 13 1
|
| 111 |
+
27 12 41 1
|
| 112 |
+
28 12 42 1
|
| 113 |
+
29 13 14 1
|
| 114 |
+
30 13 43 1
|
| 115 |
+
31 13 44 1
|
| 116 |
+
32 14 15 1
|
| 117 |
+
33 14 45 1
|
| 118 |
+
34 14 46 1
|
| 119 |
+
35 15 16 1
|
| 120 |
+
36 15 47 1
|
| 121 |
+
37 15 48 1
|
| 122 |
+
38 16 17 1
|
| 123 |
+
39 16 49 1
|
| 124 |
+
40 16 50 1
|
| 125 |
+
41 17 18 1
|
| 126 |
+
42 17 51 1
|
| 127 |
+
43 17 52 1
|
| 128 |
+
44 18 19 1
|
| 129 |
+
45 18 53 1
|
| 130 |
+
46 18 54 1
|
| 131 |
+
47 19 20 1
|
| 132 |
+
48 19 55 1
|
| 133 |
+
49 19 56 1
|
| 134 |
+
50 20 21 1
|
| 135 |
+
51 20 57 1
|
| 136 |
+
52 20 58 1
|
| 137 |
+
53 21 22 1
|
| 138 |
+
54 21 59 1
|
| 139 |
+
55 21 60 1
|
| 140 |
+
56 22 61 1
|
| 141 |
+
57 22 62 1
|
| 142 |
+
58 22 63 1
|
| 143 |
+
59 23 24 1
|
| 144 |
+
60 23 64 1
|
| 145 |
+
61 23 65 1
|
| 146 |
+
62 24 25 2
|
| 147 |
+
63 24 26 am
|
| 148 |
+
64 26 27 1
|
| 149 |
+
65 26 66 1
|
| 150 |
+
66 27 67 1
|
| 151 |
+
67 28 68 1
|
| 152 |
+
68 29 30 1
|
| 153 |
+
69 29 69 1
|
| 154 |
+
70 29 70 1
|
| 155 |
+
71 30 71 1
|
| 156 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 157 |
+
1 TUX 1
|
| 158 |
+
|
1xxe/1xxe_ligand.sdf
ADDED
|
@@ -0,0 +1,148 @@
|
|
|
|
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|
|
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|
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|
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|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
1xxe_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
71 71 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
-10.7240 3.1650 -2.7820 C 0 0 0 0 0
|
| 6 |
+
-11.1710 1.8330 -3.3560 C 0 0 0 0 0
|
| 7 |
+
-10.9630 0.7050 -2.3520 C 0 0 0 0 0
|
| 8 |
+
-9.2980 3.0660 -2.2750 C 0 0 0 0 0
|
| 9 |
+
-9.1520 1.9050 -1.2970 C 0 0 0 0 0
|
| 10 |
+
-9.5970 0.6650 -1.8880 O 0 0 0 0 0
|
| 11 |
+
-10.8290 4.1970 -3.7820 O 0 0 0 0 0
|
| 12 |
+
-12.7720 4.9120 -2.7680 O 0 0 0 0 0
|
| 13 |
+
-11.8010 5.2030 -3.4390 C 0 0 0 0 0
|
| 14 |
+
-11.6230 6.6290 -3.9360 C 0 0 0 0 0
|
| 15 |
+
-10.9370 7.4640 -2.8600 C 0 0 0 0 0
|
| 16 |
+
-11.6710 8.7850 -2.6500 C 0 0 0 0 0
|
| 17 |
+
-11.5000 9.7000 -3.8610 C 0 0 0 0 0
|
| 18 |
+
-12.6740 10.6740 -3.9810 C 0 0 0 0 0
|
| 19 |
+
-13.5280 10.3610 -5.2080 C 0 0 0 0 0
|
| 20 |
+
-13.0920 11.2100 -6.4000 C 0 0 0 0 0
|
| 21 |
+
-14.0600 11.0240 -7.5660 C 0 0 0 0 0
|
| 22 |
+
-13.7390 11.9950 -8.7010 C 0 0 0 0 0
|
| 23 |
+
-15.0210 12.6010 -9.2710 C 0 0 0 0 0
|
| 24 |
+
-16.0420 11.5080 -9.5780 C 0 0 0 0 0
|
| 25 |
+
-16.7790 11.8060 -10.8820 C 0 0 0 0 0
|
| 26 |
+
-17.7950 10.7070 -11.1850 C 0 0 0 0 0
|
| 27 |
+
-8.8780 4.3810 -1.6240 C 0 0 0 0 0
|
| 28 |
+
-7.3630 4.5070 -1.6620 C 0 0 0 0 0
|
| 29 |
+
-6.7950 4.7340 -2.7130 O 0 0 0 0 0
|
| 30 |
+
-6.7040 4.3670 -0.5460 N 0 0 0 0 0
|
| 31 |
+
-5.2730 4.5060 -0.5340 O 0 0 0 0 0
|
| 32 |
+
-12.5440 1.9060 -3.7150 O 0 0 0 0 0
|
| 33 |
+
-11.2680 -0.6490 -2.9600 C 0 0 0 0 0
|
| 34 |
+
-10.1260 -1.1870 -3.6110 O 0 0 0 0 0
|
| 35 |
+
-11.3735 3.4220 -1.9452 H 0 0 0 0 0
|
| 36 |
+
-10.5684 1.6202 -4.2390 H 0 0 0 0 0
|
| 37 |
+
-11.6443 0.9079 -1.5257 H 0 0 0 0 0
|
| 38 |
+
-8.6401 2.8747 -3.1227 H 0 0 0 0 0
|
| 39 |
+
-9.7638 2.1110 -0.4187 H 0 0 0 0 0
|
| 40 |
+
-8.0999 1.8052 -1.0301 H 0 0 0 0 0
|
| 41 |
+
-12.5992 7.0588 -4.1604 H 0 0 0 0 0
|
| 42 |
+
-11.0095 6.6246 -4.8369 H 0 0 0 0 0
|
| 43 |
+
-9.9158 7.6757 -3.1769 H 0 0 0 0 0
|
| 44 |
+
-10.9435 6.9054 -1.9240 H 0 0 0 0 0
|
| 45 |
+
-11.2559 9.2818 -1.7731 H 0 0 0 0 0
|
| 46 |
+
-12.7325 8.5789 -2.5127 H 0 0 0 0 0
|
| 47 |
+
-11.4610 9.0862 -4.7609 H 0 0 0 0 0
|
| 48 |
+
-10.5807 10.2730 -3.7398 H 0 0 0 0 0
|
| 49 |
+
-12.2787 11.6849 -4.0809 H 0 0 0 0 0
|
| 50 |
+
-13.2962 10.5803 -3.0909 H 0 0 0 0 0
|
| 51 |
+
-14.5698 10.5846 -4.9785 H 0 0 0 0 0
|
| 52 |
+
-13.4068 9.3080 -5.4623 H 0 0 0 0 0
|
| 53 |
+
-12.0950 10.8992 -6.7123 H 0 0 0 0 0
|
| 54 |
+
-13.0867 12.2596 -6.1061 H 0 0 0 0 0
|
| 55 |
+
-15.0734 11.2180 -7.2147 H 0 0 0 0 0
|
| 56 |
+
-13.9666 10.0044 -7.9399 H 0 0 0 0 0
|
| 57 |
+
-13.2224 11.4531 -9.4932 H 0 0 0 0 0
|
| 58 |
+
-13.1122 12.7974 -8.3120 H 0 0 0 0 0
|
| 59 |
+
-14.7818 13.1299 -10.1935 H 0 0 0 0 0
|
| 60 |
+
-15.4457 13.2845 -8.5358 H 0 0 0 0 0
|
| 61 |
+
-16.7675 11.4662 -8.7656 H 0 0 0 0 0
|
| 62 |
+
-15.5193 10.5568 -9.6789 H 0 0 0 0 0
|
| 63 |
+
-16.0549 11.8530 -11.6954 H 0 0 0 0 0
|
| 64 |
+
-17.3039 12.7562 -10.7830 H 0 0 0 0 0
|
| 65 |
+
-17.2780 9.7521 -11.2799 H 0 0 0 0 0
|
| 66 |
+
-18.5198 10.6501 -10.3729 H 0 0 0 0 0
|
| 67 |
+
-18.3099 10.9371 -12.1177 H 0 0 0 0 0
|
| 68 |
+
-9.2172 4.3973 -0.5883 H 0 0 0 0 0
|
| 69 |
+
-9.3247 5.2135 -2.1676 H 0 0 0 0 0
|
| 70 |
+
-7.2035 4.1589 0.3186 H 0 0 0 0 0
|
| 71 |
+
-4.9473 4.3740 0.3594 H 0 0 0 0 0
|
| 72 |
+
-12.6709 2.6173 -4.3471 H 0 0 0 0 0
|
| 73 |
+
-12.0642 -0.5297 -3.6949 H 0 0 0 0 0
|
| 74 |
+
-11.5676 -1.3294 -2.1629 H 0 0 0 0 0
|
| 75 |
+
-10.3464 -2.0427 -3.9863 H 0 0 0 0 0
|
| 76 |
+
1 2 1 0 0 0
|
| 77 |
+
1 4 1 0 0 0
|
| 78 |
+
1 7 1 0 0 0
|
| 79 |
+
2 3 1 0 0 0
|
| 80 |
+
2 28 1 0 0 0
|
| 81 |
+
3 6 1 0 0 0
|
| 82 |
+
3 29 1 0 0 0
|
| 83 |
+
4 5 1 0 0 0
|
| 84 |
+
4 23 1 0 0 0
|
| 85 |
+
5 6 1 0 0 0
|
| 86 |
+
7 9 1 0 0 0
|
| 87 |
+
9 8 2 0 0 0
|
| 88 |
+
9 10 1 0 0 0
|
| 89 |
+
10 11 1 0 0 0
|
| 90 |
+
11 12 1 0 0 0
|
| 91 |
+
12 13 1 0 0 0
|
| 92 |
+
13 14 1 0 0 0
|
| 93 |
+
14 15 1 0 0 0
|
| 94 |
+
15 16 1 0 0 0
|
| 95 |
+
16 17 1 0 0 0
|
| 96 |
+
17 18 1 0 0 0
|
| 97 |
+
18 19 1 0 0 0
|
| 98 |
+
19 20 1 0 0 0
|
| 99 |
+
20 21 1 0 0 0
|
| 100 |
+
21 22 1 0 0 0
|
| 101 |
+
23 24 1 0 0 0
|
| 102 |
+
24 25 2 0 0 0
|
| 103 |
+
24 26 1 0 0 0
|
| 104 |
+
26 27 1 0 0 0
|
| 105 |
+
29 30 1 0 0 0
|
| 106 |
+
1 31 1 0 0 0
|
| 107 |
+
2 32 1 0 0 0
|
| 108 |
+
3 33 1 0 0 0
|
| 109 |
+
4 34 1 0 0 0
|
| 110 |
+
5 35 1 0 0 0
|
| 111 |
+
5 36 1 0 0 0
|
| 112 |
+
10 37 1 0 0 0
|
| 113 |
+
10 38 1 0 0 0
|
| 114 |
+
11 39 1 0 0 0
|
| 115 |
+
11 40 1 0 0 0
|
| 116 |
+
12 41 1 0 0 0
|
| 117 |
+
12 42 1 0 0 0
|
| 118 |
+
13 43 1 0 0 0
|
| 119 |
+
13 44 1 0 0 0
|
| 120 |
+
14 45 1 0 0 0
|
| 121 |
+
14 46 1 0 0 0
|
| 122 |
+
15 47 1 0 0 0
|
| 123 |
+
15 48 1 0 0 0
|
| 124 |
+
16 49 1 0 0 0
|
| 125 |
+
16 50 1 0 0 0
|
| 126 |
+
17 51 1 0 0 0
|
| 127 |
+
17 52 1 0 0 0
|
| 128 |
+
18 53 1 0 0 0
|
| 129 |
+
18 54 1 0 0 0
|
| 130 |
+
19 55 1 0 0 0
|
| 131 |
+
19 56 1 0 0 0
|
| 132 |
+
20 57 1 0 0 0
|
| 133 |
+
20 58 1 0 0 0
|
| 134 |
+
21 59 1 0 0 0
|
| 135 |
+
21 60 1 0 0 0
|
| 136 |
+
22 61 1 0 0 0
|
| 137 |
+
22 62 1 0 0 0
|
| 138 |
+
22 63 1 0 0 0
|
| 139 |
+
23 64 1 0 0 0
|
| 140 |
+
23 65 1 0 0 0
|
| 141 |
+
26 66 1 0 0 0
|
| 142 |
+
27 67 1 0 0 0
|
| 143 |
+
28 68 1 0 0 0
|
| 144 |
+
29 69 1 0 0 0
|
| 145 |
+
29 70 1 0 0 0
|
| 146 |
+
30 71 1 0 0 0
|
| 147 |
+
M END
|
| 148 |
+
$$$$
|
1xxe/1xxe_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1xxe/1xxe_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1yt7/1yt7_ligand.mol2
ADDED
|
@@ -0,0 +1,164 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
|
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|
|
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|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:52 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1yt7_ligand
|
| 7 |
+
73 75 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 C1 19.3300 52.5070 199.5170 C.3 1 3FC -0.0653
|
| 14 |
+
2 C2 18.5390 53.8240 199.5290 C.3 1 3FC -0.0557
|
| 15 |
+
3 C3 17.4430 53.7640 200.5930 C.3 1 3FC -0.0491
|
| 16 |
+
4 C4 17.2690 55.1640 201.2140 C.3 1 3FC -0.0130
|
| 17 |
+
5 C5 16.3930 55.0900 202.4800 C.3 1 3FC 0.1308
|
| 18 |
+
6 N6 16.4730 53.7710 203.0110 N.am 1 3FC -0.2416
|
| 19 |
+
7 C7 17.3310 53.4680 204.0220 C.2 1 3FC 0.3223
|
| 20 |
+
8 O8 18.1680 54.2930 204.4090 O.2 1 3FC -0.3774
|
| 21 |
+
9 O9 17.2460 52.2730 204.5870 O.3 1 3FC -0.2568
|
| 22 |
+
10 C10 17.9780 52.1410 205.7940 C.3 1 3FC 0.1119
|
| 23 |
+
11 C11 18.8080 50.8590 205.6800 C.3 1 3FC 0.0757
|
| 24 |
+
12 C12 19.9410 51.0820 204.7190 C.2 1 3FC 0.2128
|
| 25 |
+
13 N13 19.8530 50.8590 203.3700 N.2 1 3FC -0.2288
|
| 26 |
+
14 N14 20.9630 51.1400 202.8650 N.2 1 3FC -0.2218
|
| 27 |
+
15 C15 21.7930 51.5120 203.8700 C.2 1 3FC 0.2423
|
| 28 |
+
16 O16 21.1980 51.5470 205.1370 O.3 1 3FC -0.1808
|
| 29 |
+
17 C17 23.1750 51.8200 203.6890 C.ar 1 3FC 0.0692
|
| 30 |
+
18 C18 23.9630 52.1020 204.8210 C.ar 1 3FC -0.0192
|
| 31 |
+
19 C19 25.3090 52.3310 204.6870 C.ar 1 3FC -0.0329
|
| 32 |
+
20 C20 25.9020 52.2990 203.4390 C.ar 1 3FC 0.0405
|
| 33 |
+
21 C21 25.1290 52.0360 202.2880 C.ar 1 3FC -0.0329
|
| 34 |
+
22 C22 23.7590 51.8000 202.4120 C.ar 1 3FC -0.0192
|
| 35 |
+
23 C23 27.3720 52.5490 203.3190 C.3 1 3FC 0.3679
|
| 36 |
+
24 F24 27.6930 52.8260 202.0220 F 1 3FC -0.2296
|
| 37 |
+
25 F25 28.0430 51.4440 203.7230 F 1 3FC -0.2296
|
| 38 |
+
26 F26 27.7180 53.5950 204.1100 F 1 3FC -0.2296
|
| 39 |
+
27 C27 16.9850 51.9760 206.9830 C.3 1 3FC -0.0044
|
| 40 |
+
28 C28 16.0370 50.7920 206.6840 C.3 1 3FC -0.0572
|
| 41 |
+
29 C29 16.1670 53.2570 207.1760 C.3 1 3FC -0.0572
|
| 42 |
+
30 C30 17.7520 51.6840 208.2690 C.3 1 3FC -0.0572
|
| 43 |
+
31 C33 14.6500 56.5430 201.1440 C.2 1 3FC 0.2905
|
| 44 |
+
32 O34 15.2120 57.6210 201.3030 O.2 1 3FC -0.3575
|
| 45 |
+
33 N35 13.7390 56.3810 200.1350 N.am 1 3FC -0.1675
|
| 46 |
+
34 N36 13.7660 57.0920 199.0920 N.am 1 3FC -0.1407
|
| 47 |
+
35 C37 14.8410 57.0890 198.1800 C.3 1 3FC 0.0887
|
| 48 |
+
36 C38 14.2770 58.0650 197.0740 C.3 1 3FC 0.0998
|
| 49 |
+
37 O39 12.9540 58.4620 197.5850 O.3 1 3FC -0.2603
|
| 50 |
+
38 C40 12.7900 57.8320 198.7420 C.2 1 3FC 0.3445
|
| 51 |
+
39 O41 11.7780 57.9510 199.4260 O.2 1 3FC -0.3761
|
| 52 |
+
40 C31 14.9770 55.3350 202.0590 C.2 1 3FC 0.2386
|
| 53 |
+
41 O32 14.0550 54.3550 202.2240 O.2 1 3FC -0.3478
|
| 54 |
+
42 H1 20.1161 52.5584 198.7492 H 1 3FC 0.0230
|
| 55 |
+
43 H2 18.6499 51.6728 199.2901 H 1 3FC 0.0230
|
| 56 |
+
44 H3 19.7905 52.3468 200.5030 H 1 3FC 0.0230
|
| 57 |
+
45 H4 18.0804 53.9829 198.5419 H 1 3FC 0.0263
|
| 58 |
+
46 H5 19.2211 54.6569 199.7548 H 1 3FC 0.0263
|
| 59 |
+
47 H6 17.7282 53.0461 201.3761 H 1 3FC 0.0267
|
| 60 |
+
48 H7 16.4971 53.4456 200.1305 H 1 3FC 0.0267
|
| 61 |
+
49 H8 16.7887 55.8280 200.4802 H 1 3FC 0.0313
|
| 62 |
+
50 H9 18.2572 55.5665 201.4811 H 1 3FC 0.0313
|
| 63 |
+
51 H10 16.7169 55.8312 203.2255 H 1 3FC 0.0795
|
| 64 |
+
52 H11 15.8872 53.0539 202.6334 H 1 3FC 0.1900
|
| 65 |
+
53 H12 18.6263 53.0153 205.9530 H 1 3FC 0.0687
|
| 66 |
+
54 H13 18.1710 50.0408 205.3128 H 1 3FC 0.0580
|
| 67 |
+
55 H14 19.2118 50.5941 206.6683 H 1 3FC 0.0580
|
| 68 |
+
56 H15 23.5044 52.1383 205.8025 H 1 3FC 0.0717
|
| 69 |
+
57 H16 25.9106 52.5381 205.5646 H 1 3FC 0.0837
|
| 70 |
+
58 H17 25.5977 52.0173 201.3108 H 1 3FC 0.0837
|
| 71 |
+
59 H18 23.1538 51.6039 201.5343 H 1 3FC 0.0717
|
| 72 |
+
60 H19 15.3314 50.6675 207.5186 H 1 3FC 0.0236
|
| 73 |
+
61 H20 16.6269 49.8716 206.5622 H 1 3FC 0.0236
|
| 74 |
+
62 H21 15.4780 50.9945 205.7585 H 1 3FC 0.0236
|
| 75 |
+
63 H22 16.8452 54.0966 207.3884 H 1 3FC 0.0236
|
| 76 |
+
64 H23 15.4720 53.1249 208.0184 H 1 3FC 0.0236
|
| 77 |
+
65 H24 15.5965 53.4693 206.2598 H 1 3FC 0.0236
|
| 78 |
+
66 H25 18.3437 50.7654 208.1424 H 1 3FC 0.0236
|
| 79 |
+
67 H26 17.0411 51.5509 209.0978 H 1 3FC 0.0236
|
| 80 |
+
68 H27 18.4243 52.5251 208.4940 H 1 3FC 0.0236
|
| 81 |
+
69 H28 13.0321 55.6796 200.2267 H 1 3FC 0.2181
|
| 82 |
+
70 H29 15.0297 56.0831 197.7769 H 1 3FC 0.0572
|
| 83 |
+
71 H30 15.7625 57.4801 198.6360 H 1 3FC 0.0572
|
| 84 |
+
72 H31 14.1831 57.5475 196.1079 H 1 3FC 0.0632
|
| 85 |
+
73 H32 14.9300 58.9425 196.9580 H 1 3FC 0.0632
|
| 86 |
+
@<TRIPOS>BOND
|
| 87 |
+
1 2 1 1
|
| 88 |
+
2 3 2 1
|
| 89 |
+
3 4 3 1
|
| 90 |
+
4 5 4 1
|
| 91 |
+
5 5 6 1
|
| 92 |
+
6 40 5 1
|
| 93 |
+
7 6 7 am
|
| 94 |
+
8 7 8 2
|
| 95 |
+
9 7 9 1
|
| 96 |
+
10 9 10 1
|
| 97 |
+
11 10 11 1
|
| 98 |
+
12 10 27 1
|
| 99 |
+
13 11 12 1
|
| 100 |
+
14 12 13 2
|
| 101 |
+
15 12 16 1
|
| 102 |
+
16 13 14 1
|
| 103 |
+
17 15 14 2
|
| 104 |
+
18 16 15 1
|
| 105 |
+
19 15 17 1
|
| 106 |
+
20 17 18 ar
|
| 107 |
+
21 17 22 ar
|
| 108 |
+
22 18 19 ar
|
| 109 |
+
23 19 20 ar
|
| 110 |
+
24 21 20 ar
|
| 111 |
+
25 20 23 1
|
| 112 |
+
26 22 21 ar
|
| 113 |
+
27 23 24 1
|
| 114 |
+
28 23 25 1
|
| 115 |
+
29 23 26 1
|
| 116 |
+
30 27 28 1
|
| 117 |
+
31 27 29 1
|
| 118 |
+
32 27 30 1
|
| 119 |
+
33 31 32 2
|
| 120 |
+
34 31 33 am
|
| 121 |
+
35 31 40 1
|
| 122 |
+
36 33 34 1
|
| 123 |
+
37 34 35 1
|
| 124 |
+
38 34 38 am
|
| 125 |
+
39 35 36 1
|
| 126 |
+
40 36 37 1
|
| 127 |
+
41 37 38 1
|
| 128 |
+
42 38 39 2
|
| 129 |
+
43 40 41 2
|
| 130 |
+
44 1 42 1
|
| 131 |
+
45 1 43 1
|
| 132 |
+
46 1 44 1
|
| 133 |
+
47 2 45 1
|
| 134 |
+
48 2 46 1
|
| 135 |
+
49 3 47 1
|
| 136 |
+
50 3 48 1
|
| 137 |
+
51 4 49 1
|
| 138 |
+
52 4 50 1
|
| 139 |
+
53 5 51 1
|
| 140 |
+
54 6 52 1
|
| 141 |
+
55 10 53 1
|
| 142 |
+
56 11 54 1
|
| 143 |
+
57 11 55 1
|
| 144 |
+
58 18 56 1
|
| 145 |
+
59 19 57 1
|
| 146 |
+
60 21 58 1
|
| 147 |
+
61 22 59 1
|
| 148 |
+
62 28 60 1
|
| 149 |
+
63 28 61 1
|
| 150 |
+
64 28 62 1
|
| 151 |
+
65 29 63 1
|
| 152 |
+
66 29 64 1
|
| 153 |
+
67 29 65 1
|
| 154 |
+
68 30 66 1
|
| 155 |
+
69 30 67 1
|
| 156 |
+
70 30 68 1
|
| 157 |
+
71 33 69 1
|
| 158 |
+
72 35 70 1
|
| 159 |
+
73 35 71 1
|
| 160 |
+
74 36 72 1
|
| 161 |
+
75 36 73 1
|
| 162 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 163 |
+
1 3FC 1
|
| 164 |
+
|
1yt7/1yt7_ligand.sdf
ADDED
|
@@ -0,0 +1,154 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
1yt7_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
73 75 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
19.3300 52.5070 199.5170 C 0 0 0 0 0
|
| 6 |
+
18.5390 53.8240 199.5290 C 0 0 0 0 0
|
| 7 |
+
17.4430 53.7640 200.5930 C 0 0 0 0 0
|
| 8 |
+
17.2690 55.1640 201.2140 C 0 0 0 0 0
|
| 9 |
+
16.3930 55.0900 202.4800 C 0 0 0 0 0
|
| 10 |
+
16.4730 53.7710 203.0110 N 0 0 0 0 0
|
| 11 |
+
17.3310 53.4680 204.0220 C 0 0 0 0 0
|
| 12 |
+
18.1680 54.2930 204.4090 O 0 0 0 0 0
|
| 13 |
+
17.2460 52.2730 204.5870 O 0 0 0 0 0
|
| 14 |
+
17.9780 52.1410 205.7940 C 0 0 0 0 0
|
| 15 |
+
18.8080 50.8590 205.6800 C 0 0 0 0 0
|
| 16 |
+
19.9410 51.0820 204.7190 C 0 0 0 0 0
|
| 17 |
+
19.8530 50.8590 203.3700 N 0 0 0 0 0
|
| 18 |
+
20.9630 51.1400 202.8650 N 0 0 0 0 0
|
| 19 |
+
21.7930 51.5120 203.8700 C 0 0 0 0 0
|
| 20 |
+
21.1980 51.5470 205.1370 O 0 0 0 0 0
|
| 21 |
+
23.1750 51.8200 203.6890 C 0 0 0 0 0
|
| 22 |
+
23.9630 52.1020 204.8210 C 0 0 0 0 0
|
| 23 |
+
25.3090 52.3310 204.6870 C 0 0 0 0 0
|
| 24 |
+
25.9020 52.2990 203.4390 C 0 0 0 0 0
|
| 25 |
+
25.1290 52.0360 202.2880 C 0 0 0 0 0
|
| 26 |
+
23.7590 51.8000 202.4120 C 0 0 0 0 0
|
| 27 |
+
27.3720 52.5490 203.3190 C 0 0 0 0 0
|
| 28 |
+
27.6930 52.8260 202.0220 F 0 0 0 0 0
|
| 29 |
+
28.0430 51.4440 203.7230 F 0 0 0 0 0
|
| 30 |
+
27.7180 53.5950 204.1100 F 0 0 0 0 0
|
| 31 |
+
16.9850 51.9760 206.9830 C 0 0 0 0 0
|
| 32 |
+
16.0370 50.7920 206.6840 C 0 0 0 0 0
|
| 33 |
+
16.1670 53.2570 207.1760 C 0 0 0 0 0
|
| 34 |
+
17.7520 51.6840 208.2690 C 0 0 0 0 0
|
| 35 |
+
14.6500 56.5430 201.1440 C 0 0 0 0 0
|
| 36 |
+
15.2120 57.6210 201.3030 O 0 0 0 0 0
|
| 37 |
+
13.7390 56.3810 200.1350 N 0 0 0 0 0
|
| 38 |
+
13.7660 57.0920 199.0920 N 0 0 0 0 0
|
| 39 |
+
14.8410 57.0890 198.1800 C 0 0 0 0 0
|
| 40 |
+
14.2770 58.0650 197.0740 C 0 0 0 0 0
|
| 41 |
+
12.9540 58.4620 197.5850 O 0 0 0 0 0
|
| 42 |
+
12.7900 57.8320 198.7420 C 0 0 0 0 0
|
| 43 |
+
11.7780 57.9510 199.4260 O 0 0 0 0 0
|
| 44 |
+
14.9770 55.3350 202.0590 C 0 0 0 0 0
|
| 45 |
+
14.0550 54.3550 202.2240 O 0 0 0 0 0
|
| 46 |
+
19.7857 52.3495 200.4945 H 0 0 0 0 0
|
| 47 |
+
18.6550 51.6813 199.2921 H 0 0 0 0 0
|
| 48 |
+
20.1085 52.5592 198.7559 H 0 0 0 0 0
|
| 49 |
+
18.0824 53.9777 198.5513 H 0 0 0 0 0
|
| 50 |
+
19.2159 54.6475 199.7566 H 0 0 0 0 0
|
| 51 |
+
17.7220 53.0502 201.3681 H 0 0 0 0 0
|
| 52 |
+
16.5056 53.4450 200.1374 H 0 0 0 0 0
|
| 53 |
+
16.7847 55.8156 200.4867 H 0 0 0 0 0
|
| 54 |
+
18.2498 55.5548 201.4852 H 0 0 0 0 0
|
| 55 |
+
16.7199 55.8175 203.2229 H 0 0 0 0 0
|
| 56 |
+
15.8755 53.0396 202.6258 H 0 0 0 0 0
|
| 57 |
+
18.6072 53.0152 205.9612 H 0 0 0 0 0
|
| 58 |
+
18.1769 50.0479 205.3168 H 0 0 0 0 0
|
| 59 |
+
19.2078 50.5959 206.6593 H 0 0 0 0 0
|
| 60 |
+
23.5018 52.1385 205.8080 H 0 0 0 0 0
|
| 61 |
+
25.9140 52.5393 205.5695 H 0 0 0 0 0
|
| 62 |
+
25.6003 52.0172 201.3054 H 0 0 0 0 0
|
| 63 |
+
23.1505 51.6028 201.5295 H 0 0 0 0 0
|
| 64 |
+
15.4838 50.9938 205.7668 H 0 0 0 0 0
|
| 65 |
+
16.6228 49.8807 206.5635 H 0 0 0 0 0
|
| 66 |
+
15.3384 50.6696 207.5117 H 0 0 0 0 0
|
| 67 |
+
16.8400 54.0880 207.3870 H 0 0 0 0 0
|
| 68 |
+
15.6026 53.4666 206.2673 H 0 0 0 0 0
|
| 69 |
+
15.4784 53.1246 208.0105 H 0 0 0 0 0
|
| 70 |
+
18.3235 50.7636 208.1487 H 0 0 0 0 0
|
| 71 |
+
18.4311 52.5098 208.4809 H 0 0 0 0 0
|
| 72 |
+
17.0475 51.5707 209.0930 H 0 0 0 0 0
|
| 73 |
+
13.0180 55.6656 200.2285 H 0 0 0 0 0
|
| 74 |
+
15.1098 56.1000 197.8088 H 0 0 0 0 0
|
| 75 |
+
15.7927 57.4020 198.6095 H 0 0 0 0 0
|
| 76 |
+
14.2144 57.5872 196.0963 H 0 0 0 0 0
|
| 77 |
+
14.9295 58.9226 196.9101 H 0 0 0 0 0
|
| 78 |
+
2 1 1 0 0 0
|
| 79 |
+
3 2 1 0 0 0
|
| 80 |
+
4 3 1 0 0 0
|
| 81 |
+
5 4 1 0 0 0
|
| 82 |
+
5 6 1 0 0 0
|
| 83 |
+
40 5 1 0 0 0
|
| 84 |
+
6 7 1 0 0 0
|
| 85 |
+
7 8 2 0 0 0
|
| 86 |
+
7 9 1 0 0 0
|
| 87 |
+
9 10 1 0 0 0
|
| 88 |
+
10 11 1 0 0 0
|
| 89 |
+
10 27 1 0 0 0
|
| 90 |
+
11 12 1 0 0 0
|
| 91 |
+
12 13 4 0 0 0
|
| 92 |
+
12 16 4 0 0 0
|
| 93 |
+
13 14 4 0 0 0
|
| 94 |
+
15 14 4 0 0 0
|
| 95 |
+
16 15 4 0 0 0
|
| 96 |
+
15 17 1 0 0 0
|
| 97 |
+
17 18 4 0 0 0
|
| 98 |
+
17 22 4 0 0 0
|
| 99 |
+
18 19 4 0 0 0
|
| 100 |
+
19 20 4 0 0 0
|
| 101 |
+
21 20 4 0 0 0
|
| 102 |
+
20 23 1 0 0 0
|
| 103 |
+
22 21 4 0 0 0
|
| 104 |
+
23 24 1 0 0 0
|
| 105 |
+
23 25 1 0 0 0
|
| 106 |
+
23 26 1 0 0 0
|
| 107 |
+
27 28 1 0 0 0
|
| 108 |
+
27 29 1 0 0 0
|
| 109 |
+
27 30 1 0 0 0
|
| 110 |
+
31 32 2 0 0 0
|
| 111 |
+
31 33 1 0 0 0
|
| 112 |
+
31 40 1 0 0 0
|
| 113 |
+
33 34 1 0 0 0
|
| 114 |
+
34 35 1 0 0 0
|
| 115 |
+
34 38 1 0 0 0
|
| 116 |
+
35 36 1 0 0 0
|
| 117 |
+
36 37 1 0 0 0
|
| 118 |
+
37 38 1 0 0 0
|
| 119 |
+
38 39 2 0 0 0
|
| 120 |
+
40 41 2 0 0 0
|
| 121 |
+
1 42 1 0 0 0
|
| 122 |
+
1 43 1 0 0 0
|
| 123 |
+
1 44 1 0 0 0
|
| 124 |
+
2 45 1 0 0 0
|
| 125 |
+
2 46 1 0 0 0
|
| 126 |
+
3 47 1 0 0 0
|
| 127 |
+
3 48 1 0 0 0
|
| 128 |
+
4 49 1 0 0 0
|
| 129 |
+
4 50 1 0 0 0
|
| 130 |
+
5 51 1 0 0 0
|
| 131 |
+
6 52 1 0 0 0
|
| 132 |
+
10 53 1 0 0 0
|
| 133 |
+
11 54 1 0 0 0
|
| 134 |
+
11 55 1 0 0 0
|
| 135 |
+
18 56 1 0 0 0
|
| 136 |
+
19 57 1 0 0 0
|
| 137 |
+
21 58 1 0 0 0
|
| 138 |
+
22 59 1 0 0 0
|
| 139 |
+
28 60 1 0 0 0
|
| 140 |
+
28 61 1 0 0 0
|
| 141 |
+
28 62 1 0 0 0
|
| 142 |
+
29 63 1 0 0 0
|
| 143 |
+
29 64 1 0 0 0
|
| 144 |
+
29 65 1 0 0 0
|
| 145 |
+
30 66 1 0 0 0
|
| 146 |
+
30 67 1 0 0 0
|
| 147 |
+
30 68 1 0 0 0
|
| 148 |
+
33 69 1 0 0 0
|
| 149 |
+
35 70 1 0 0 0
|
| 150 |
+
35 71 1 0 0 0
|
| 151 |
+
36 72 1 0 0 0
|
| 152 |
+
36 73 1 0 0 0
|
| 153 |
+
M END
|
| 154 |
+
$$$$
|
1yt7/1yt7_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1yt7/1yt7_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1z6e/1z6e_ligand.mol2
ADDED
|
@@ -0,0 +1,138 @@
|
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|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:54 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
1z6e_ligand
|
| 7 |
+
59 63 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 F 2.6460 27.9550 53.1860 F 1 IK8 -0.2205
|
| 14 |
+
2 F1 2.6820 26.4560 54.6720 F 1 IK8 -0.2205
|
| 15 |
+
3 F2 3.5120 26.1060 52.7180 F 1 IK8 -0.2205
|
| 16 |
+
4 OT1 12.2170 27.6850 52.4430 O.3 1 IK8 -0.1911
|
| 17 |
+
5 O1 8.2020 29.3600 56.3580 O.2 1 IK8 -0.3722
|
| 18 |
+
6 N 12.1390 28.5390 51.4060 N.2 1 IK8 -0.1479
|
| 19 |
+
7 N1 10.3140 29.9370 50.4830 N.pl3 1 IK8 -0.3306
|
| 20 |
+
8 N2 6.8810 27.7950 54.3520 N.pl3 1 IK8 -0.1143
|
| 21 |
+
9 N3 5.8980 27.1470 53.6570 N.2 1 IK8 -0.1332
|
| 22 |
+
10 N4 6.2450 30.3470 56.9360 N.am 1 IK8 -0.2339
|
| 23 |
+
11 C 11.0340 27.5590 53.0420 C.ar 1 IK8 0.1484
|
| 24 |
+
12 C1 10.0800 28.4000 52.3350 C.ar 1 IK8 0.0490
|
| 25 |
+
13 C2 10.8570 28.9980 51.3150 C.2 1 IK8 0.1245
|
| 26 |
+
14 C3 10.5740 26.7930 54.2410 C.ar 1 IK8 -0.0228
|
| 27 |
+
15 C4 9.1700 26.8740 54.7090 C.ar 1 IK8 -0.0239
|
| 28 |
+
16 C5 8.2100 27.7260 53.9540 C.ar 1 IK8 0.1240
|
| 29 |
+
17 C6 8.6760 28.5020 52.7610 C.ar 1 IK8 -0.0157
|
| 30 |
+
18 C7 4.7110 27.4850 54.1830 C.2 1 IK8 0.1253
|
| 31 |
+
19 C8 4.9120 28.3780 55.2720 C.2 1 IK8 0.0006
|
| 32 |
+
20 C9 6.3130 28.5580 55.3520 C.2 1 IK8 0.1998
|
| 33 |
+
21 C10 3.3450 26.9950 53.6810 C.3 1 IK8 0.3850
|
| 34 |
+
22 C13 6.9760 29.4340 56.2410 C.2 1 IK8 0.2640
|
| 35 |
+
23 C14 6.7990 31.3390 57.7130 C.ar 1 IK8 0.0938
|
| 36 |
+
24 C15 7.5870 31.0050 58.8890 C.ar 1 IK8 0.1486
|
| 37 |
+
25 C16 8.1980 31.9800 59.7480 C.ar 1 IK8 -0.0063
|
| 38 |
+
26 C17 8.0100 33.3790 59.4090 C.ar 1 IK8 0.0815
|
| 39 |
+
27 C18 7.2340 33.7410 58.2070 C.ar 1 IK8 -0.0439
|
| 40 |
+
28 C19 6.6110 32.7370 57.3450 C.ar 1 IK8 -0.0458
|
| 41 |
+
29 N5 8.4670 34.3420 60.3390 N.pl3 1 IK8 -0.2126
|
| 42 |
+
30 C21 9.7120 34.9040 60.3640 C.2 1 IK8 0.0398
|
| 43 |
+
31 C22 9.7590 35.8160 61.4250 C.2 1 IK8 -0.0345
|
| 44 |
+
32 N6 8.5370 35.8010 62.0450 N.2 1 IK8 -0.3326
|
| 45 |
+
33 C25 7.7650 34.8940 61.3830 C.2 1 IK8 0.1722
|
| 46 |
+
34 F3 7.7730 29.7180 59.1680 F 1 IK8 -0.1950
|
| 47 |
+
35 C11 6.3060 34.5810 61.7770 C.3 1 IK8 0.0454
|
| 48 |
+
36 N7 6.1390 34.1820 63.2100 N.4 1 IK8 0.2478
|
| 49 |
+
37 C20 6.5330 35.1040 64.3010 C.3 1 IK8 -0.0415
|
| 50 |
+
38 C23 6.3330 32.7740 63.5730 C.3 1 IK8 -0.0415
|
| 51 |
+
39 H1 9.3121 30.1664 50.5496 H 1 IK8 0.1701
|
| 52 |
+
40 H2 10.9068 30.4151 49.7895 H 1 IK8 0.1701
|
| 53 |
+
41 H3 5.2480 30.2944 56.8791 H 1 IK8 0.2222
|
| 54 |
+
42 H4 11.2792 26.1680 54.7769 H 1 IK8 0.0572
|
| 55 |
+
43 H5 8.8478 26.3229 55.5851 H 1 IK8 0.0597
|
| 56 |
+
44 H6 7.9841 29.1338 52.2158 H 1 IK8 0.0604
|
| 57 |
+
45 H7 4.1505 28.8270 55.9079 H 1 IK8 0.0555
|
| 58 |
+
46 H8 8.7767 31.6832 60.6152 H 1 IK8 0.0532
|
| 59 |
+
47 H9 7.1217 34.7890 57.9538 H 1 IK8 0.0514
|
| 60 |
+
48 H10 6.0351 33.0199 56.4713 H 1 IK8 0.0477
|
| 61 |
+
49 H11 10.5271 34.6810 59.6771 H 1 IK8 0.0801
|
| 62 |
+
50 H12 10.6142 36.4282 61.7073 H 1 IK8 0.0413
|
| 63 |
+
51 H13 5.9448 33.7575 61.1435 H 1 IK8 0.1053
|
| 64 |
+
52 H14 5.6972 35.4787 61.5939 H 1 IK8 0.1053
|
| 65 |
+
53 H15 5.1355 34.2512 63.2749 H 1 IK8 0.2047
|
| 66 |
+
54 H16 6.3328 34.6289 65.2727 H 1 IK8 0.0778
|
| 67 |
+
55 H17 5.9528 36.0351 64.2217 H 1 IK8 0.0778
|
| 68 |
+
56 H18 7.6059 35.3323 64.2186 H 1 IK8 0.0778
|
| 69 |
+
57 H19 6.0270 32.1333 62.7328 H 1 IK8 0.0778
|
| 70 |
+
58 H20 5.7230 32.5358 64.4568 H 1 IK8 0.0778
|
| 71 |
+
59 H21 7.3944 32.5971 63.8014 H 1 IK8 0.0778
|
| 72 |
+
@<TRIPOS>BOND
|
| 73 |
+
1 21 1 1
|
| 74 |
+
2 21 2 1
|
| 75 |
+
3 21 3 1
|
| 76 |
+
4 6 4 1
|
| 77 |
+
5 11 4 1
|
| 78 |
+
6 22 5 2
|
| 79 |
+
7 13 6 2
|
| 80 |
+
8 13 7 1
|
| 81 |
+
9 8 9 1
|
| 82 |
+
10 8 16 1
|
| 83 |
+
11 20 8 1
|
| 84 |
+
12 18 9 2
|
| 85 |
+
13 22 10 am
|
| 86 |
+
14 10 23 1
|
| 87 |
+
15 12 11 ar
|
| 88 |
+
16 14 11 ar
|
| 89 |
+
17 12 13 1
|
| 90 |
+
18 17 12 ar
|
| 91 |
+
19 15 14 ar
|
| 92 |
+
20 16 15 ar
|
| 93 |
+
21 16 17 ar
|
| 94 |
+
22 19 18 1
|
| 95 |
+
23 18 21 1
|
| 96 |
+
24 20 19 2
|
| 97 |
+
25 20 22 1
|
| 98 |
+
26 23 24 ar
|
| 99 |
+
27 23 28 ar
|
| 100 |
+
28 24 25 ar
|
| 101 |
+
29 24 34 1
|
| 102 |
+
30 25 26 ar
|
| 103 |
+
31 26 27 ar
|
| 104 |
+
32 26 29 1
|
| 105 |
+
33 27 28 ar
|
| 106 |
+
34 29 30 1
|
| 107 |
+
35 29 33 1
|
| 108 |
+
36 30 31 2
|
| 109 |
+
37 31 32 1
|
| 110 |
+
38 32 33 2
|
| 111 |
+
39 33 35 1
|
| 112 |
+
40 35 36 1
|
| 113 |
+
41 36 37 1
|
| 114 |
+
42 36 38 1
|
| 115 |
+
43 7 39 1
|
| 116 |
+
44 7 40 1
|
| 117 |
+
45 10 41 1
|
| 118 |
+
46 14 42 1
|
| 119 |
+
47 15 43 1
|
| 120 |
+
48 17 44 1
|
| 121 |
+
49 19 45 1
|
| 122 |
+
50 25 46 1
|
| 123 |
+
51 27 47 1
|
| 124 |
+
52 28 48 1
|
| 125 |
+
53 30 49 1
|
| 126 |
+
54 31 50 1
|
| 127 |
+
55 35 51 1
|
| 128 |
+
56 35 52 1
|
| 129 |
+
57 36 53 1
|
| 130 |
+
58 37 54 1
|
| 131 |
+
59 37 55 1
|
| 132 |
+
60 37 56 1
|
| 133 |
+
61 38 57 1
|
| 134 |
+
62 38 58 1
|
| 135 |
+
63 38 59 1
|
| 136 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 137 |
+
1 IK8 1
|
| 138 |
+
|
1z6e/1z6e_ligand.sdf
ADDED
|
@@ -0,0 +1,128 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
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|
|
|
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|
|
|
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|
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|
|
|
|
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|
|
|
|
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|
|
|
|
|
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|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
1z6e_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
59 63 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
2.6460 27.9550 53.1860 F 0 0 0 0 0
|
| 6 |
+
2.6820 26.4560 54.6720 F 0 0 0 0 0
|
| 7 |
+
3.5120 26.1060 52.7180 F 0 0 0 0 0
|
| 8 |
+
12.2170 27.6850 52.4430 O 0 0 0 0 0
|
| 9 |
+
8.2020 29.3600 56.3580 O 0 0 0 0 0
|
| 10 |
+
12.1390 28.5390 51.4060 N 0 0 0 0 0
|
| 11 |
+
10.3140 29.9370 50.4830 N 0 0 0 0 0
|
| 12 |
+
6.8810 27.7950 54.3520 N 0 0 0 0 0
|
| 13 |
+
5.8980 27.1470 53.6570 N 0 0 0 0 0
|
| 14 |
+
6.2450 30.3470 56.9360 N 0 0 0 0 0
|
| 15 |
+
11.0340 27.5590 53.0420 C 0 0 0 0 0
|
| 16 |
+
10.0800 28.4000 52.3350 C 0 0 0 0 0
|
| 17 |
+
10.8570 28.9980 51.3150 C 0 0 0 0 0
|
| 18 |
+
10.5740 26.7930 54.2410 C 0 0 0 0 0
|
| 19 |
+
9.1700 26.8740 54.7090 C 0 0 0 0 0
|
| 20 |
+
8.2100 27.7260 53.9540 C 0 0 0 0 0
|
| 21 |
+
8.6760 28.5020 52.7610 C 0 0 0 0 0
|
| 22 |
+
4.7110 27.4850 54.1830 C 0 0 0 0 0
|
| 23 |
+
4.9120 28.3780 55.2720 C 0 0 0 0 0
|
| 24 |
+
6.3130 28.5580 55.3520 C 0 0 0 0 0
|
| 25 |
+
3.3450 26.9950 53.6810 C 0 0 0 0 0
|
| 26 |
+
6.9760 29.4340 56.2410 C 0 0 0 0 0
|
| 27 |
+
6.7990 31.3390 57.7130 C 0 0 0 0 0
|
| 28 |
+
7.5870 31.0050 58.8890 C 0 0 0 0 0
|
| 29 |
+
8.1980 31.9800 59.7480 C 0 0 0 0 0
|
| 30 |
+
8.0100 33.3790 59.4090 C 0 0 0 0 0
|
| 31 |
+
7.2340 33.7410 58.2070 C 0 0 0 0 0
|
| 32 |
+
6.6110 32.7370 57.3450 C 0 0 0 0 0
|
| 33 |
+
8.4670 34.3420 60.3390 N 0 0 0 0 0
|
| 34 |
+
9.7120 34.9040 60.3640 C 0 0 0 0 0
|
| 35 |
+
9.7590 35.8160 61.4250 C 0 0 0 0 0
|
| 36 |
+
8.5370 35.8010 62.0450 N 0 0 0 0 0
|
| 37 |
+
7.7650 34.8940 61.3830 C 0 0 0 0 0
|
| 38 |
+
7.7730 29.7180 59.1680 F 0 0 0 0 0
|
| 39 |
+
6.3060 34.5810 61.7770 C 0 0 0 0 0
|
| 40 |
+
6.1390 34.1820 63.2100 N 0 3 0 0 0
|
| 41 |
+
6.5330 35.1040 64.3010 C 0 0 0 0 0
|
| 42 |
+
6.3330 32.7740 63.5730 C 0 0 0 0 0
|
| 43 |
+
10.9010 30.4104 49.7962 H 0 0 0 0 0
|
| 44 |
+
9.3218 30.1642 50.5490 H 0 0 0 0 0
|
| 45 |
+
5.2281 30.2933 56.8780 H 0 0 0 0 0
|
| 46 |
+
11.2831 26.1645 54.7798 H 0 0 0 0 0
|
| 47 |
+
8.8460 26.3199 55.5900 H 0 0 0 0 0
|
| 48 |
+
7.9803 29.1373 52.2128 H 0 0 0 0 0
|
| 49 |
+
4.1498 28.8274 55.9085 H 0 0 0 0 0
|
| 50 |
+
8.7799 31.6815 60.6200 H 0 0 0 0 0
|
| 51 |
+
7.1211 34.7948 57.9524 H 0 0 0 0 0
|
| 52 |
+
6.0319 33.0214 56.4665 H 0 0 0 0 0
|
| 53 |
+
10.5279 34.6808 59.6765 H 0 0 0 0 0
|
| 54 |
+
10.6150 36.4288 61.7076 H 0 0 0 0 0
|
| 55 |
+
5.9775 33.7407 61.1654 H 0 0 0 0 0
|
| 56 |
+
5.7257 35.4908 61.6234 H 0 0 0 0 0
|
| 57 |
+
5.1301 34.3226 63.1577 H 0 0 0 0 0
|
| 58 |
+
7.5962 35.3295 64.2182 H 0 0 0 0 0
|
| 59 |
+
5.9574 36.0262 64.2212 H 0 0 0 0 0
|
| 60 |
+
6.3342 34.6322 65.2633 H 0 0 0 0 0
|
| 61 |
+
5.6186 32.1577 63.0273 H 0 0 0 0 0
|
| 62 |
+
7.3478 32.4703 63.3158 H 0 0 0 0 0
|
| 63 |
+
6.1763 32.6515 64.6447 H 0 0 0 0 0
|
| 64 |
+
21 1 1 0 0 0
|
| 65 |
+
21 2 1 0 0 0
|
| 66 |
+
21 3 1 0 0 0
|
| 67 |
+
6 4 4 0 0 0
|
| 68 |
+
11 4 4 0 0 0
|
| 69 |
+
22 5 2 0 0 0
|
| 70 |
+
13 6 4 0 0 0
|
| 71 |
+
13 7 1 0 0 0
|
| 72 |
+
8 9 4 0 0 0
|
| 73 |
+
8 16 1 0 0 0
|
| 74 |
+
20 8 4 0 0 0
|
| 75 |
+
18 9 4 0 0 0
|
| 76 |
+
22 10 1 0 0 0
|
| 77 |
+
10 23 1 0 0 0
|
| 78 |
+
12 11 4 0 0 0
|
| 79 |
+
14 11 4 0 0 0
|
| 80 |
+
12 13 4 0 0 0
|
| 81 |
+
17 12 4 0 0 0
|
| 82 |
+
15 14 4 0 0 0
|
| 83 |
+
16 15 4 0 0 0
|
| 84 |
+
16 17 4 0 0 0
|
| 85 |
+
19 18 4 0 0 0
|
| 86 |
+
18 21 1 0 0 0
|
| 87 |
+
20 19 4 0 0 0
|
| 88 |
+
20 22 1 0 0 0
|
| 89 |
+
23 24 4 0 0 0
|
| 90 |
+
23 28 4 0 0 0
|
| 91 |
+
24 25 4 0 0 0
|
| 92 |
+
24 34 1 0 0 0
|
| 93 |
+
25 26 4 0 0 0
|
| 94 |
+
26 27 4 0 0 0
|
| 95 |
+
26 29 1 0 0 0
|
| 96 |
+
27 28 4 0 0 0
|
| 97 |
+
29 30 4 0 0 0
|
| 98 |
+
29 33 4 0 0 0
|
| 99 |
+
30 31 4 0 0 0
|
| 100 |
+
31 32 4 0 0 0
|
| 101 |
+
32 33 4 0 0 0
|
| 102 |
+
33 35 1 0 0 0
|
| 103 |
+
35 36 1 0 0 0
|
| 104 |
+
36 37 1 0 0 0
|
| 105 |
+
36 38 1 0 0 0
|
| 106 |
+
7 39 1 0 0 0
|
| 107 |
+
7 40 1 0 0 0
|
| 108 |
+
10 41 1 0 0 0
|
| 109 |
+
14 42 1 0 0 0
|
| 110 |
+
15 43 1 0 0 0
|
| 111 |
+
17 44 1 0 0 0
|
| 112 |
+
19 45 1 0 0 0
|
| 113 |
+
25 46 1 0 0 0
|
| 114 |
+
27 47 1 0 0 0
|
| 115 |
+
28 48 1 0 0 0
|
| 116 |
+
30 49 1 0 0 0
|
| 117 |
+
31 50 1 0 0 0
|
| 118 |
+
35 51 1 0 0 0
|
| 119 |
+
35 52 1 0 0 0
|
| 120 |
+
36 53 1 0 0 0
|
| 121 |
+
37 54 1 0 0 0
|
| 122 |
+
37 55 1 0 0 0
|
| 123 |
+
37 56 1 0 0 0
|
| 124 |
+
38 57 1 0 0 0
|
| 125 |
+
38 58 1 0 0 0
|
| 126 |
+
38 59 1 0 0 0
|
| 127 |
+
M END
|
| 128 |
+
$$$$
|
1z6e/1z6e_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
1z6e/1z6e_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2ao6/2ao6_ligand.mol2
ADDED
|
@@ -0,0 +1,109 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:53 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
2ao6_ligand
|
| 7 |
+
45 48 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 C1 27.2230 5.6740 3.6940 C.3 1 R18 0.0280
|
| 14 |
+
2 C2 26.3530 6.8180 4.2060 C.3 1 R18 0.0431
|
| 15 |
+
3 C3 24.8960 6.6830 3.7900 C.2 1 R18 0.1453
|
| 16 |
+
4 C4 24.3220 5.3580 3.9950 C.2 1 R18 0.0317
|
| 17 |
+
5 C5 25.0940 4.2280 4.0720 C.2 1 R18 0.0323
|
| 18 |
+
6 C6 24.3940 2.8690 4.3110 C.3 1 R18 0.0007
|
| 19 |
+
7 C7 25.1900 1.7150 3.7000 C.3 1 R18 -0.0278
|
| 20 |
+
8 C8 26.6350 1.7090 4.2960 C.3 1 R18 -0.0038
|
| 21 |
+
9 C9 27.3540 3.0980 4.0390 C.2 1 R18 0.0320
|
| 22 |
+
10 C10 26.6080 4.2590 3.9420 C.2 1 R18 0.0433
|
| 23 |
+
11 C11 28.8360 3.0620 3.9340 C.2 1 R18 -0.0301
|
| 24 |
+
12 C12 29.5820 1.9280 4.0330 C.2 1 R18 -0.1332
|
| 25 |
+
13 C13 28.9390 0.5400 4.2460 C.3 1 R18 -0.0815
|
| 26 |
+
14 C14 27.4720 0.5830 3.6920 C.3 1 R18 -0.0842
|
| 27 |
+
15 C15 26.9510 -0.8690 3.8880 C.3 1 R18 -0.0641
|
| 28 |
+
16 C16 28.2610 -1.6930 3.7160 C.3 1 R18 -0.0430
|
| 29 |
+
17 C17 29.4430 -0.6890 3.4440 C.3 1 R18 0.0069
|
| 30 |
+
18 C18 28.9380 0.2760 5.8040 C.3 1 R18 -0.1225
|
| 31 |
+
19 C27 29.5480 -0.4410 1.9370 C.3 1 R18 -0.0538
|
| 32 |
+
20 O83 24.2400 7.6200 3.3440 O.2 1 R18 -0.3705
|
| 33 |
+
21 O97 30.6520 -1.2580 3.9540 O.3 1 R18 -0.4088
|
| 34 |
+
22 H1 28.1970 5.7235 4.2028 H 1 R18 0.0591
|
| 35 |
+
23 H2 27.3677 5.8051 2.6115 H 1 R18 0.0591
|
| 36 |
+
24 H3 26.7462 7.7644 3.8065 H 1 R18 0.0523
|
| 37 |
+
25 H4 26.4046 6.8342 5.3047 H 1 R18 0.0523
|
| 38 |
+
26 H5 23.2413 5.2630 4.0903 H 1 R18 0.0908
|
| 39 |
+
27 H6 23.3944 2.8960 3.8527 H 1 R18 0.0464
|
| 40 |
+
28 H7 24.2966 2.7024 5.3939 H 1 R18 0.0464
|
| 41 |
+
29 H8 25.2435 1.8432 2.6088 H 1 R18 0.0316
|
| 42 |
+
30 H9 24.6928 0.7620 3.9333 H 1 R18 0.0316
|
| 43 |
+
31 H10 26.5609 1.5471 5.3815 H 1 R18 0.0468
|
| 44 |
+
32 H11 29.3583 4.0029 3.7672 H 1 R18 0.1039
|
| 45 |
+
33 H12 30.6660 2.0016 3.9597 H 1 R18 0.0414
|
| 46 |
+
34 H13 27.5121 0.7813 2.6108 H 1 R18 0.0107
|
| 47 |
+
35 H14 26.2054 -1.1352 3.1243 H 1 R18 0.0253
|
| 48 |
+
36 H15 26.5167 -1.0087 4.8889 H 1 R18 0.0253
|
| 49 |
+
37 H16 28.1571 -2.3843 2.8667 H 1 R18 0.0274
|
| 50 |
+
38 H17 28.4632 -2.2662 4.6328 H 1 R18 0.0274
|
| 51 |
+
39 H18 28.5743 1.1724 6.3275 H 1 R18 0.0009
|
| 52 |
+
40 H19 29.9607 0.0462 6.1376 H 1 R18 0.0009
|
| 53 |
+
41 H20 28.2783 -0.5743 6.0314 H 1 R18 0.0009
|
| 54 |
+
42 H21 30.3719 0.2599 1.7373 H 1 R18 0.0239
|
| 55 |
+
43 H22 28.6043 -0.0118 1.5694 H 1 R18 0.0239
|
| 56 |
+
44 H23 29.7433 -1.3929 1.4215 H 1 R18 0.0239
|
| 57 |
+
45 H24 31.3734 -0.6605 3.7955 H 1 R18 0.2077
|
| 58 |
+
@<TRIPOS>BOND
|
| 59 |
+
1 1 2 1
|
| 60 |
+
2 1 10 1
|
| 61 |
+
3 2 3 1
|
| 62 |
+
4 3 4 1
|
| 63 |
+
5 3 20 2
|
| 64 |
+
6 4 5 2
|
| 65 |
+
7 5 6 1
|
| 66 |
+
8 5 10 1
|
| 67 |
+
9 6 7 1
|
| 68 |
+
10 7 8 1
|
| 69 |
+
11 8 9 1
|
| 70 |
+
12 8 14 1
|
| 71 |
+
13 9 10 2
|
| 72 |
+
14 9 11 1
|
| 73 |
+
15 11 12 2
|
| 74 |
+
16 12 13 1
|
| 75 |
+
17 13 14 1
|
| 76 |
+
18 13 17 1
|
| 77 |
+
19 13 18 1
|
| 78 |
+
20 14 15 1
|
| 79 |
+
21 15 16 1
|
| 80 |
+
22 16 17 1
|
| 81 |
+
23 17 19 1
|
| 82 |
+
24 17 21 1
|
| 83 |
+
25 1 22 1
|
| 84 |
+
26 1 23 1
|
| 85 |
+
27 2 24 1
|
| 86 |
+
28 2 25 1
|
| 87 |
+
29 4 26 1
|
| 88 |
+
30 6 27 1
|
| 89 |
+
31 6 28 1
|
| 90 |
+
32 7 29 1
|
| 91 |
+
33 7 30 1
|
| 92 |
+
34 8 31 1
|
| 93 |
+
35 11 32 1
|
| 94 |
+
36 12 33 1
|
| 95 |
+
37 14 34 1
|
| 96 |
+
38 15 35 1
|
| 97 |
+
39 15 36 1
|
| 98 |
+
40 16 37 1
|
| 99 |
+
41 16 38 1
|
| 100 |
+
42 18 39 1
|
| 101 |
+
43 18 40 1
|
| 102 |
+
44 18 41 1
|
| 103 |
+
45 19 42 1
|
| 104 |
+
46 19 43 1
|
| 105 |
+
47 19 44 1
|
| 106 |
+
48 21 45 1
|
| 107 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 108 |
+
1 R18 1
|
| 109 |
+
|
2ao6/2ao6_ligand.sdf
ADDED
|
@@ -0,0 +1,99 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
2ao6_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
45 48 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
27.2230 5.6740 3.6940 C 0 0 0 0 0
|
| 6 |
+
26.3530 6.8180 4.2060 C 0 0 0 0 0
|
| 7 |
+
24.8960 6.6830 3.7900 C 0 0 0 0 0
|
| 8 |
+
24.3220 5.3580 3.9950 C 0 0 0 0 0
|
| 9 |
+
25.0940 4.2280 4.0720 C 0 0 0 0 0
|
| 10 |
+
24.3940 2.8690 4.3110 C 0 0 0 0 0
|
| 11 |
+
25.1900 1.7150 3.7000 C 0 0 0 0 0
|
| 12 |
+
26.6350 1.7090 4.2960 C 0 0 0 0 0
|
| 13 |
+
27.3540 3.0980 4.0390 C 0 0 0 0 0
|
| 14 |
+
26.6080 4.2590 3.9420 C 0 0 0 0 0
|
| 15 |
+
28.8360 3.0620 3.9340 C 0 0 0 0 0
|
| 16 |
+
29.5820 1.9280 4.0330 C 0 0 0 0 0
|
| 17 |
+
28.9390 0.5400 4.2460 C 0 0 0 0 0
|
| 18 |
+
27.4720 0.5830 3.6920 C 0 0 0 0 0
|
| 19 |
+
26.9510 -0.8690 3.8880 C 0 0 0 0 0
|
| 20 |
+
28.2610 -1.6930 3.7160 C 0 0 0 0 0
|
| 21 |
+
29.4430 -0.6890 3.4440 C 0 0 0 0 0
|
| 22 |
+
28.9380 0.2760 5.8040 C 0 0 0 0 0
|
| 23 |
+
29.5480 -0.4410 1.9370 C 0 0 0 0 0
|
| 24 |
+
24.2400 7.6200 3.3440 O 0 0 0 0 0
|
| 25 |
+
30.6520 -1.2580 3.9540 O 0 0 0 0 0
|
| 26 |
+
28.1695 5.7174 4.2329 H 0 0 0 0 0
|
| 27 |
+
27.3270 5.8003 2.6163 H 0 0 0 0 0
|
| 28 |
+
26.7369 7.7453 3.7806 H 0 0 0 0 0
|
| 29 |
+
26.3916 6.8048 5.2952 H 0 0 0 0 0
|
| 30 |
+
23.2404 5.2629 4.0904 H 0 0 0 0 0
|
| 31 |
+
23.4114 2.8987 3.8402 H 0 0 0 0 0
|
| 32 |
+
24.3161 2.7045 5.3857 H 0 0 0 0 0
|
| 33 |
+
25.2426 1.8412 2.6186 H 0 0 0 0 0
|
| 34 |
+
24.6971 0.7705 3.9303 H 0 0 0 0 0
|
| 35 |
+
26.5468 1.5454 5.3700 H 0 0 0 0 0
|
| 36 |
+
29.3588 4.0038 3.7671 H 0 0 0 0 0
|
| 37 |
+
30.6670 2.0017 3.9597 H 0 0 0 0 0
|
| 38 |
+
27.4091 0.8530 2.6378 H 0 0 0 0 0
|
| 39 |
+
26.1637 -1.1489 3.1881 H 0 0 0 0 0
|
| 40 |
+
26.4561 -1.0301 4.8457 H 0 0 0 0 0
|
| 41 |
+
28.1598 -2.3870 2.8816 H 0 0 0 0 0
|
| 42 |
+
28.4609 -2.2709 4.6183 H 0 0 0 0 0
|
| 43 |
+
29.9630 0.2906 6.1744 H 0 0 0 0 0
|
| 44 |
+
28.3590 1.0534 6.3026 H 0 0 0 0 0
|
| 45 |
+
28.4912 -0.6975 6.0060 H 0 0 0 0 0
|
| 46 |
+
28.5660 -0.1774 1.5442 H 0 0 0 0 0
|
| 47 |
+
30.2458 0.3757 1.7522 H 0 0 0 0 0
|
| 48 |
+
29.9066 -1.3453 1.4454 H 0 0 0 0 0
|
| 49 |
+
30.9039 -2.0097 3.4126 H 0 0 0 0 0
|
| 50 |
+
1 2 1 0 0 0
|
| 51 |
+
1 10 1 0 0 0
|
| 52 |
+
2 3 1 0 0 0
|
| 53 |
+
3 4 1 0 0 0
|
| 54 |
+
3 20 2 0 0 0
|
| 55 |
+
4 5 2 0 0 0
|
| 56 |
+
5 6 1 0 0 0
|
| 57 |
+
5 10 1 0 0 0
|
| 58 |
+
6 7 1 0 0 0
|
| 59 |
+
7 8 1 0 0 0
|
| 60 |
+
8 9 1 0 0 0
|
| 61 |
+
8 14 1 0 0 0
|
| 62 |
+
9 10 2 0 0 0
|
| 63 |
+
9 11 1 0 0 0
|
| 64 |
+
11 12 2 0 0 0
|
| 65 |
+
12 13 1 0 0 0
|
| 66 |
+
13 14 1 0 0 0
|
| 67 |
+
13 17 1 0 0 0
|
| 68 |
+
13 18 1 0 0 0
|
| 69 |
+
14 15 1 0 0 0
|
| 70 |
+
15 16 1 0 0 0
|
| 71 |
+
16 17 1 0 0 0
|
| 72 |
+
17 19 1 0 0 0
|
| 73 |
+
17 21 1 0 0 0
|
| 74 |
+
1 22 1 0 0 0
|
| 75 |
+
1 23 1 0 0 0
|
| 76 |
+
2 24 1 0 0 0
|
| 77 |
+
2 25 1 0 0 0
|
| 78 |
+
4 26 1 0 0 0
|
| 79 |
+
6 27 1 0 0 0
|
| 80 |
+
6 28 1 0 0 0
|
| 81 |
+
7 29 1 0 0 0
|
| 82 |
+
7 30 1 0 0 0
|
| 83 |
+
8 31 1 0 0 0
|
| 84 |
+
11 32 1 0 0 0
|
| 85 |
+
12 33 1 0 0 0
|
| 86 |
+
14 34 1 0 0 0
|
| 87 |
+
15 35 1 0 0 0
|
| 88 |
+
15 36 1 0 0 0
|
| 89 |
+
16 37 1 0 0 0
|
| 90 |
+
16 38 1 0 0 0
|
| 91 |
+
18 39 1 0 0 0
|
| 92 |
+
18 40 1 0 0 0
|
| 93 |
+
18 41 1 0 0 0
|
| 94 |
+
19 42 1 0 0 0
|
| 95 |
+
19 43 1 0 0 0
|
| 96 |
+
19 44 1 0 0 0
|
| 97 |
+
21 45 1 0 0 0
|
| 98 |
+
M END
|
| 99 |
+
$$$$
|
2ao6/2ao6_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2ao6/2ao6_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2gnf/2gnf_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2gnf/2gnf_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2pax/2pax_ligand.mol2
ADDED
|
@@ -0,0 +1,66 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
###
|
| 2 |
+
### Created by X-TOOL on Mon Sep 10 21:12:46 2018
|
| 3 |
+
###
|
| 4 |
+
|
| 5 |
+
@<TRIPOS>MOLECULE
|
| 6 |
+
2pax_ligand
|
| 7 |
+
24 26 1 0 0
|
| 8 |
+
SMALL
|
| 9 |
+
GAST_HUCK
|
| 10 |
+
|
| 11 |
+
|
| 12 |
+
@<TRIPOS>ATOM
|
| 13 |
+
1 C1A 41.4240 23.8800 19.3220 C.2 1 4AN 0.2173
|
| 14 |
+
2 O1A 41.0650 24.2260 18.2080 O.2 1 4AN -0.3863
|
| 15 |
+
3 C1 40.4280 23.1820 20.2560 C.ar 1 4AN 0.0456
|
| 16 |
+
4 C2 39.0960 22.9300 19.8540 C.ar 1 4AN -0.0552
|
| 17 |
+
5 C3 38.2050 22.2880 20.7320 C.ar 1 4AN -0.0359
|
| 18 |
+
6 C4 38.6180 21.8880 22.0130 C.ar 1 4AN 0.0590
|
| 19 |
+
7 N4 37.6600 21.2420 22.8470 N.pl3 1 4AN -0.3273
|
| 20 |
+
8 C5 40.4240 21.7850 23.7120 C.ar 1 4AN -0.0465
|
| 21 |
+
9 C6 41.7510 22.0510 24.0930 C.ar 1 4AN -0.0548
|
| 22 |
+
10 C7 42.6340 22.6750 23.2100 C.ar 1 4AN -0.0423
|
| 23 |
+
11 C8 42.1910 23.0510 21.9350 C.ar 1 4AN 0.0577
|
| 24 |
+
12 C8A 43.1410 23.7250 20.9560 C.2 1 4AN 0.2278
|
| 25 |
+
13 O8A 44.3100 23.9230 21.2860 O.2 1 4AN -0.3792
|
| 26 |
+
14 N9 42.6940 24.0920 19.7380 N.am 1 4AN -0.2029
|
| 27 |
+
15 C9 40.8520 22.7910 21.5500 C.ar 1 4AN 0.0072
|
| 28 |
+
16 C10 39.9540 22.1470 22.4400 C.ar 1 4AN 0.0196
|
| 29 |
+
17 H1 38.7615 23.2320 18.8681 H 1 4AN 0.0659
|
| 30 |
+
18 H2 37.1855 22.0993 20.4157 H 1 4AN 0.0489
|
| 31 |
+
19 H3 36.7050 21.0738 22.4997 H 1 4AN 0.1790
|
| 32 |
+
20 H4 37.9225 20.9432 23.7971 H 1 4AN 0.1790
|
| 33 |
+
21 H5 39.7553 21.2940 24.4097 H 1 4AN 0.0694
|
| 34 |
+
22 H6 42.0919 21.7687 25.0825 H 1 4AN 0.0604
|
| 35 |
+
23 H7 43.6578 22.8678 23.5094 H 1 4AN 0.0696
|
| 36 |
+
24 H8 43.3312 24.5422 19.1125 H 1 4AN 0.2240
|
| 37 |
+
@<TRIPOS>BOND
|
| 38 |
+
1 1 2 2
|
| 39 |
+
2 3 1 1
|
| 40 |
+
3 1 14 am
|
| 41 |
+
4 4 3 ar
|
| 42 |
+
5 3 15 ar
|
| 43 |
+
6 5 4 ar
|
| 44 |
+
7 6 5 ar
|
| 45 |
+
8 6 7 1
|
| 46 |
+
9 16 6 ar
|
| 47 |
+
10 8 9 ar
|
| 48 |
+
11 16 8 ar
|
| 49 |
+
12 9 10 ar
|
| 50 |
+
13 10 11 ar
|
| 51 |
+
14 11 12 1
|
| 52 |
+
15 11 15 ar
|
| 53 |
+
16 12 13 2
|
| 54 |
+
17 12 14 am
|
| 55 |
+
18 15 16 ar
|
| 56 |
+
19 4 17 1
|
| 57 |
+
20 5 18 1
|
| 58 |
+
21 7 19 1
|
| 59 |
+
22 7 20 1
|
| 60 |
+
23 8 21 1
|
| 61 |
+
24 9 22 1
|
| 62 |
+
25 10 23 1
|
| 63 |
+
26 14 24 1
|
| 64 |
+
@<TRIPOS>SUBSTRUCTURE
|
| 65 |
+
1 4AN 1
|
| 66 |
+
|
2pax/2pax_ligand.sdf
ADDED
|
@@ -0,0 +1,56 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
2pax_ligand
|
| 2 |
+
-I-interpret-
|
| 3 |
+
|
| 4 |
+
24 26 0 0 0 0 0 0 0 0999 V2000
|
| 5 |
+
41.4240 23.8800 19.3220 C 0 0 0 0 0
|
| 6 |
+
41.0650 24.2260 18.2080 O 0 0 0 0 0
|
| 7 |
+
40.4280 23.1820 20.2560 C 0 0 0 0 0
|
| 8 |
+
39.0960 22.9300 19.8540 C 0 0 0 0 0
|
| 9 |
+
38.2050 22.2880 20.7320 C 0 0 0 0 0
|
| 10 |
+
38.6180 21.8880 22.0130 C 0 0 0 0 0
|
| 11 |
+
37.6600 21.2420 22.8470 N 0 0 0 0 0
|
| 12 |
+
40.4240 21.7850 23.7120 C 0 0 0 0 0
|
| 13 |
+
41.7510 22.0510 24.0930 C 0 0 0 0 0
|
| 14 |
+
42.6340 22.6750 23.2100 C 0 0 0 0 0
|
| 15 |
+
42.1910 23.0510 21.9350 C 0 0 0 0 0
|
| 16 |
+
43.1410 23.7250 20.9560 C 0 0 0 0 0
|
| 17 |
+
44.3100 23.9230 21.2860 O 0 0 0 0 0
|
| 18 |
+
42.6940 24.0920 19.7380 N 0 0 0 0 0
|
| 19 |
+
40.8520 22.7910 21.5500 C 0 0 0 0 0
|
| 20 |
+
39.9540 22.1470 22.4400 C 0 0 0 0 0
|
| 21 |
+
38.7597 23.2337 18.8627 H 0 0 0 0 0
|
| 22 |
+
37.1798 22.0983 20.4139 H 0 0 0 0 0
|
| 23 |
+
36.7114 21.0846 22.5068 H 0 0 0 0 0
|
| 24 |
+
37.9229 20.9370 23.7842 H 0 0 0 0 0
|
| 25 |
+
39.7516 21.2913 24.4135 H 0 0 0 0 0
|
| 26 |
+
42.0938 21.7671 25.0880 H 0 0 0 0 0
|
| 27 |
+
43.6635 22.8689 23.5111 H 0 0 0 0 0
|
| 28 |
+
43.3440 24.5512 19.1000 H 0 0 0 0 0
|
| 29 |
+
1 2 2 0 0 0
|
| 30 |
+
3 1 1 0 0 0
|
| 31 |
+
1 14 1 0 0 0
|
| 32 |
+
4 3 4 0 0 0
|
| 33 |
+
3 15 4 0 0 0
|
| 34 |
+
5 4 4 0 0 0
|
| 35 |
+
6 5 4 0 0 0
|
| 36 |
+
6 7 1 0 0 0
|
| 37 |
+
16 6 4 0 0 0
|
| 38 |
+
8 9 4 0 0 0
|
| 39 |
+
16 8 4 0 0 0
|
| 40 |
+
9 10 4 0 0 0
|
| 41 |
+
10 11 4 0 0 0
|
| 42 |
+
11 12 1 0 0 0
|
| 43 |
+
11 15 4 0 0 0
|
| 44 |
+
12 13 2 0 0 0
|
| 45 |
+
12 14 1 0 0 0
|
| 46 |
+
15 16 4 0 0 0
|
| 47 |
+
4 17 1 0 0 0
|
| 48 |
+
5 18 1 0 0 0
|
| 49 |
+
7 19 1 0 0 0
|
| 50 |
+
7 20 1 0 0 0
|
| 51 |
+
8 21 1 0 0 0
|
| 52 |
+
9 22 1 0 0 0
|
| 53 |
+
10 23 1 0 0 0
|
| 54 |
+
14 24 1 0 0 0
|
| 55 |
+
M END
|
| 56 |
+
$$$$
|
2pax/2pax_protein_esmfold_aligned_tr_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
2pax/2pax_protein_processed_fix.pdb
ADDED
|
The diff for this file is too large to render.
See raw diff
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