Datasets:

linbc20 commited on
Commit
1c6bc42
·
verified ·
1 Parent(s): 08a2937

Add batch 15

Browse files
This view is limited to 50 files because it contains too many changes.   See raw diff
Files changed (50) hide show
  1. 11gs/11gs_ligand.mol2 +148 -0
  2. 11gs/11gs_ligand.sdf +144 -0
  3. 11gs/11gs_protein_esmfold_aligned_tr_fix.pdb +0 -0
  4. 11gs/11gs_protein_processed_fix.pdb +0 -0
  5. 1b2m/1b2m_ligand.mol2 +90 -0
  6. 1b2m/1b2m_ligand.sdf +80 -0
  7. 1b2m/1b2m_protein_esmfold_aligned_tr_fix.pdb +788 -0
  8. 1b2m/1b2m_protein_processed_fix.pdb +0 -0
  9. 1ciz/1ciz_ligand.mol2 +148 -0
  10. 1ciz/1ciz_ligand.sdf +138 -0
  11. 1ciz/1ciz_protein_esmfold_aligned_tr_fix.pdb +0 -0
  12. 1ciz/1ciz_protein_processed_fix.pdb +0 -0
  13. 1eoc/1eoc_ligand.mol2 +48 -0
  14. 1eoc/1eoc_ligand.sdf +38 -0
  15. 1eoc/1eoc_protein_esmfold_aligned_tr_fix.pdb +0 -0
  16. 1eoc/1eoc_protein_processed_fix.pdb +0 -0
  17. 1f4y/1f4y_ligand.mol2 +171 -0
  18. 1f4y/1f4y_ligand.sdf +161 -0
  19. 1f4y/1f4y_protein_esmfold_aligned_tr_fix.pdb +0 -0
  20. 1f4y/1f4y_protein_processed_fix.pdb +0 -0
  21. 1fh9/1fh9_ligand.mol2 +93 -0
  22. 1fh9/1fh9_ligand.sdf +83 -0
  23. 1fh9/1fh9_protein_esmfold_aligned_tr_fix.pdb +0 -0
  24. 1fh9/1fh9_protein_processed_fix.pdb +0 -0
  25. 1inf/1inf_ligand.mol2 +74 -0
  26. 1inf/1inf_ligand.sdf +64 -0
  27. 1inf/1inf_protein_esmfold_aligned_tr_fix.pdb +0 -0
  28. 1inf/1inf_protein_processed_fix.pdb +0 -0
  29. 1k21/1k21_ligand.mol2 +157 -0
  30. 1k21/1k21_ligand.sdf +147 -0
  31. 1k21/1k21_protein_esmfold_aligned_tr_fix.pdb +0 -0
  32. 1k21/1k21_protein_processed_fix.pdb +0 -0
  33. 1nxy/1nxy_ligand.mol2 +87 -0
  34. 1nxy/1nxy_ligand.sdf +79 -0
  35. 1nxy/1nxy_protein_esmfold_aligned_tr_fix.pdb +0 -0
  36. 1nxy/1nxy_protein_processed_fix.pdb +0 -0
  37. 1pk0/1pk0_ligand.mol2 +89 -0
  38. 1pk0/1pk0_ligand.sdf +87 -0
  39. 1pk0/1pk0_protein_esmfold_aligned_tr_fix.pdb +0 -0
  40. 1pk0/1pk0_protein_processed_fix.pdb +0 -0
  41. 1tlo/1tlo_ligand.mol2 +123 -0
  42. 1tlo/1tlo_ligand.sdf +113 -0
  43. 1tlo/1tlo_protein_esmfold_aligned_tr_fix.pdb +0 -0
  44. 1tlo/1tlo_protein_processed_fix.pdb +0 -0
  45. 1utz/1utz_ligand.mol2 +119 -0
  46. 1utz/1utz_ligand.sdf +111 -0
  47. 1utz/1utz_protein_esmfold_aligned_tr_fix.pdb +0 -0
  48. 1utz/1utz_protein_processed_fix.pdb +0 -0
  49. 1uvt/1uvt_ligand.mol2 +114 -0
  50. 1uvt/1uvt_ligand.sdf +104 -0
11gs/11gs_ligand.mol2 ADDED
@@ -0,0 +1,148 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:47 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 11gs_ligand
7
+ 66 66 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 N1 14.7090 10.7820 23.2520 N.4 1 GSH 0.2328
14
+ 2 CA1 14.6200 9.9440 24.4710 C.3 1 GSH 0.0304
15
+ 3 C1 15.7480 8.9120 24.4560 C.2 1 GSH 0.0846
16
+ 4 O11 16.0850 8.4010 25.5410 O.co2 1 GSH -0.5643
17
+ 5 O12 16.3130 8.6420 23.3670 O.co2 1 GSH -0.5643
18
+ 6 CB1 13.2690 9.2400 24.5300 C.3 1 GSH 0.0193
19
+ 7 CG1 12.9530 8.6610 25.9060 C.3 1 GSH 0.0441
20
+ 8 CD1 11.5780 8.0220 25.9870 C.2 1 GSH 0.1785
21
+ 9 OE1 10.7970 8.0380 25.0250 O.2 1 GSH -0.3969
22
+ 10 N2 11.2470 7.5340 27.1750 N.am 1 GSH -0.2648
23
+ 11 CA2 9.9720 6.8700 27.4160 C.3 1 GSH 0.1397
24
+ 12 C2 9.3670 7.3930 28.7190 C.2 1 GSH 0.2040
25
+ 13 O2 10.0850 7.8880 29.5910 O.2 1 GSH -0.3944
26
+ 14 CB2 10.2030 5.3550 27.5530 C.3 1 GSH 0.0342
27
+ 15 SG2 11.4450 4.7020 26.3760 S.3 1 GSH -0.1534
28
+ 16 N3 8.0510 7.2770 28.8380 N.am 1 GSH -0.2722
29
+ 17 CA3 7.3820 7.6900 30.0580 C.3 1 GSH 0.0833
30
+ 18 C3 6.9000 9.1180 30.0690 C.2 1 GSH 0.0570
31
+ 19 O31 6.0060 9.4220 30.8870 O.co2 1 GSH -0.5669
32
+ 20 O32 7.3950 9.9270 29.2540 O.co2 1 GSH -0.5669
33
+ 21 C1 5.7920 2.7370 28.0810 C.ar 1 EAA 0.1140
34
+ 22 O2 5.1050 2.1790 29.1650 O.3 1 EAA -0.2994
35
+ 23 C2 7.1260 2.3100 27.8760 C.ar 1 EAA 0.0882
36
+ 24 C3 7.8880 2.8040 26.8050 C.ar 1 EAA 0.0653
37
+ 25 C4 7.3230 3.7760 25.8990 C.ar 1 EAA 0.0358
38
+ 26 C5 5.9880 4.1980 26.1300 C.ar 1 EAA -0.0509
39
+ 27 C6 5.2430 3.6890 27.1990 C.ar 1 EAA -0.0256
40
+ 28 C7 8.0950 4.3720 24.7030 C.2 1 EAA 0.1289
41
+ 29 O1 7.5850 5.1970 23.9310 O.2 1 EAA -0.3837
42
+ 30 C8 9.6100 3.9850 24.4110 C.3 1 EAA 0.0409
43
+ 31 C9 9.8770 3.3130 23.0520 C.3 1 EAA -0.0371
44
+ 32 C10 11.1860 2.5160 22.9220 C.3 1 EAA -0.0630
45
+ 33 C11 10.6730 5.0250 24.7730 C.3 1 EAA 0.0117
46
+ 34 C12 4.0210 1.1970 29.0350 C.3 1 EAA 0.1241
47
+ 35 C13 3.8530 0.2730 30.2430 C.2 1 EAA 0.0656
48
+ 36 O 4.7490 -0.5720 30.4860 O.co2 1 EAA -0.5662
49
+ 37 OXT 2.8040 0.3540 30.9250 O.co2 1 EAA -0.5662
50
+ 38 CL1 7.8760 1.1450 28.9840 Cl 1 EAA -0.0767
51
+ 39 CL2 9.5230 2.1350 26.6450 Cl 1 EAA -0.0664
52
+ 40 H1 13.9667 11.4639 23.2582 H 1 GSH 0.2010
53
+ 41 H2 14.6216 10.1976 22.4354 H 1 GSH 0.2010
54
+ 42 H3 15.5992 11.2545 23.2333 H 1 GSH 0.2010
55
+ 43 H4 14.7284 10.5851 25.3582 H 1 GSH 0.1026
56
+ 44 H5 13.2699 8.4196 23.7972 H 1 GSH 0.0363
57
+ 45 H6 12.4849 9.9654 24.2674 H 1 GSH 0.0363
58
+ 46 H7 13.0051 9.4725 26.6467 H 1 GSH 0.0505
59
+ 47 H8 13.7076 7.8972 26.1452 H 1 GSH 0.0505
60
+ 48 H9 11.8946 7.6247 27.9316 H 1 GSH 0.1883
61
+ 49 H10 9.2861 7.0690 26.5794 H 1 GSH 0.0808
62
+ 50 H11 9.2481 4.8387 27.3750 H 1 GSH 0.0424
63
+ 51 H12 10.5479 5.1456 28.5763 H 1 GSH 0.0424
64
+ 52 H13 7.5156 6.9020 28.0812 H 1 GSH 0.1873
65
+ 53 H14 8.0859 7.5612 30.8934 H 1 GSH 0.0689
66
+ 54 H15 6.5111 7.0350 30.2080 H 1 GSH 0.0689
67
+ 55 H16 5.5377 4.9275 25.4666 H 1 GSH 0.0647
68
+ 56 H17 4.2263 4.0327 27.3514 H 1 GSH 0.0559
69
+ 57 H18 9.7941 3.1773 25.1346 H 1 GSH 0.0526
70
+ 58 H19 9.8899 4.1026 22.2863 H 1 GSH 0.0289
71
+ 59 H20 9.0447 2.6221 22.8523 H 1 GSH 0.0289
72
+ 60 H21 11.2564 2.0891 21.9107 H 1 GSH 0.0231
73
+ 61 H22 11.1963 1.7042 23.6641 H 1 GSH 0.0231
74
+ 62 H23 12.0415 3.1847 23.0981 H 1 GSH 0.0231
75
+ 63 H24 10.1990 6.0171 24.8039 H 1 GSH 0.0403
76
+ 64 H25 11.4535 5.0155 23.9979 H 1 GSH 0.0403
77
+ 65 H26 4.2260 0.5740 28.1519 H 1 GSH 0.0788
78
+ 66 H27 3.0781 1.7438 28.8871 H 1 GSH 0.0788
79
+ @<TRIPOS>BOND
80
+ 1 2 1 1
81
+ 2 6 2 1
82
+ 3 2 3 1
83
+ 4 3 5 ar
84
+ 5 3 4 ar
85
+ 6 7 6 1
86
+ 7 8 7 1
87
+ 8 10 8 am
88
+ 9 8 9 2
89
+ 10 11 10 1
90
+ 11 14 11 1
91
+ 12 11 12 1
92
+ 13 12 16 am
93
+ 14 12 13 2
94
+ 15 16 17 1
95
+ 16 17 18 1
96
+ 17 18 20 ar
97
+ 18 18 19 ar
98
+ 19 15 14 1
99
+ 20 27 21 ar
100
+ 21 23 21 ar
101
+ 22 21 22 1
102
+ 23 22 34 1
103
+ 24 34 35 1
104
+ 25 35 37 ar
105
+ 26 35 36 ar
106
+ 27 24 23 ar
107
+ 28 25 24 ar
108
+ 29 28 25 1
109
+ 30 25 26 ar
110
+ 31 26 27 ar
111
+ 32 30 28 1
112
+ 33 28 29 2
113
+ 34 33 30 1
114
+ 35 30 31 1
115
+ 36 31 32 1
116
+ 37 23 38 1
117
+ 38 24 39 1
118
+ 39 33 15 1
119
+ 40 1 40 1
120
+ 41 1 41 1
121
+ 42 1 42 1
122
+ 43 2 43 1
123
+ 44 6 44 1
124
+ 45 6 45 1
125
+ 46 7 46 1
126
+ 47 7 47 1
127
+ 48 10 48 1
128
+ 49 11 49 1
129
+ 50 14 50 1
130
+ 51 14 51 1
131
+ 52 16 52 1
132
+ 53 17 53 1
133
+ 54 17 54 1
134
+ 55 26 55 1
135
+ 56 27 56 1
136
+ 57 30 57 1
137
+ 58 31 58 1
138
+ 59 31 59 1
139
+ 60 32 60 1
140
+ 61 32 61 1
141
+ 62 32 62 1
142
+ 63 33 63 1
143
+ 64 33 64 1
144
+ 65 34 65 1
145
+ 66 34 66 1
146
+ @<TRIPOS>SUBSTRUCTURE
147
+ 1 GSH 1
148
+
11gs/11gs_ligand.sdf ADDED
@@ -0,0 +1,144 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 11gs_ligand
2
+ -I-interpret-
3
+
4
+ 69 69 0 0 0 0 0 0 0 0999 V2000
5
+ 14.7090 10.7820 23.2520 N 0 3 0 0 0
6
+ 14.6200 9.9440 24.4710 C 0 0 0 0 0
7
+ 15.7480 8.9120 24.4560 C 0 0 0 0 0
8
+ 16.0850 8.4010 25.5410 O 0 0 0 0 0
9
+ 16.3130 8.6420 23.3670 O 0 0 0 0 0
10
+ 13.2690 9.2400 24.5300 C 0 0 0 0 0
11
+ 12.9530 8.6610 25.9060 C 0 0 0 0 0
12
+ 11.5780 8.0220 25.9870 C 0 0 0 0 0
13
+ 10.7970 8.0380 25.0250 O 0 0 0 0 0
14
+ 11.2470 7.5340 27.1750 N 0 0 0 0 0
15
+ 9.9720 6.8700 27.4160 C 0 0 0 0 0
16
+ 9.3670 7.3930 28.7190 C 0 0 0 0 0
17
+ 10.0850 7.8880 29.5910 O 0 0 0 0 0
18
+ 10.2030 5.3550 27.5530 C 0 0 0 0 0
19
+ 11.4450 4.7020 26.3760 S 0 0 0 0 0
20
+ 8.0510 7.2770 28.8380 N 0 0 0 0 0
21
+ 7.3820 7.6900 30.0580 C 0 0 0 0 0
22
+ 6.9000 9.1180 30.0690 C 0 0 0 0 0
23
+ 6.0060 9.4220 30.8870 O 0 0 0 0 0
24
+ 7.3950 9.9270 29.2540 O 0 0 0 0 0
25
+ 5.7920 2.7370 28.0810 C 0 0 0 0 0
26
+ 5.1050 2.1790 29.1650 O 0 0 0 0 0
27
+ 7.1260 2.3100 27.8760 C 0 0 0 0 0
28
+ 7.8880 2.8040 26.8050 C 0 0 0 0 0
29
+ 7.3230 3.7760 25.8990 C 0 0 0 0 0
30
+ 5.9880 4.1980 26.1300 C 0 0 0 0 0
31
+ 5.2430 3.6890 27.1990 C 0 0 0 0 0
32
+ 8.0950 4.3720 24.7030 C 0 0 0 0 0
33
+ 7.5850 5.1970 23.9310 O 0 0 0 0 0
34
+ 9.6100 3.9850 24.4110 C 0 0 0 0 0
35
+ 9.8770 3.3130 23.0520 C 0 0 0 0 0
36
+ 11.1860 2.5160 22.9220 C 0 0 0 0 0
37
+ 10.6730 5.0250 24.7730 C 0 0 0 0 0
38
+ 4.0210 1.1970 29.0350 C 0 0 0 0 0
39
+ 3.8530 0.2730 30.2430 C 0 0 0 0 0
40
+ 4.7490 -0.5720 30.4860 O 0 0 0 0 0
41
+ 2.8040 0.3540 30.9250 O 0 0 0 0 0
42
+ 7.8760 1.1450 28.9840 Cl 0 0 0 0 0
43
+ 9.5230 2.1350 26.6450 Cl 0 0 0 0 0
44
+ 13.9575 11.4716 23.2593 H 0 0 0 0 0
45
+ 15.6101 11.2596 23.2342 H 0 0 0 0 0
46
+ 14.6205 10.1896 22.4264 H 0 0 0 0 0
47
+ 14.7181 10.5782 25.3521 H 0 0 0 0 0
48
+ 15.8994 9.1431 22.6603 H 0 0 0 0 0
49
+ 13.2965 8.4121 23.8215 H 0 0 0 0 0
50
+ 12.5013 9.9781 24.2978 H 0 0 0 0 0
51
+ 12.9776 9.4820 26.6226 H 0 0 0 0 0
52
+ 13.6897 7.8851 26.1142 H 0 0 0 0 0
53
+ 11.9075 7.6266 27.9467 H 0 0 0 0 0
54
+ 9.2973 7.0706 26.5838 H 0 0 0 0 0
55
+ 9.2564 4.8572 27.3428 H 0 0 0 0 0
56
+ 10.5741 5.1682 28.5607 H 0 0 0 0 0
57
+ 7.5049 6.8945 28.0661 H 0 0 0 0 0
58
+ 8.1112 7.5981 30.8630 H 0 0 0 0 0
59
+ 6.4990 7.0593 30.1613 H 0 0 0 0 0
60
+ 8.0610 9.4805 28.7261 H 0 0 0 0 0
61
+ 5.5352 4.9315 25.4629 H 0 0 0 0 0
62
+ 4.2207 4.0346 27.3523 H 0 0 0 0 0
63
+ 9.7461 3.2016 25.1565 H 0 0 0 0 0
64
+ 9.9442 4.1220 22.3246 H 0 0 0 0 0
65
+ 9.0712 2.5930 22.9092 H 0 0 0 0 0
66
+ 12.0328 3.1796 23.0968 H 0 0 0 0 0
67
+ 11.1949 1.7120 23.6579 H 0 0 0 0 0
68
+ 11.2546 2.0936 21.9195 H 0 0 0 0 0
69
+ 10.1854 5.9984 24.8257 H 0 0 0 0 0
70
+ 11.4523 4.9869 24.0118 H 0 0 0 0 0
71
+ 4.2644 0.5646 28.1813 H 0 0 0 0 0
72
+ 3.0926 1.7587 28.9317 H 0 0 0 0 0
73
+ 5.4639 -0.4696 29.8535 H 0 0 0 0 0
74
+ 2 1 1 0 0 0
75
+ 6 2 1 0 0 0
76
+ 2 3 1 0 0 0
77
+ 3 5 1 0 0 0
78
+ 3 4 2 0 0 0
79
+ 7 6 1 0 0 0
80
+ 8 7 1 0 0 0
81
+ 10 8 1 0 0 0
82
+ 8 9 2 0 0 0
83
+ 11 10 1 0 0 0
84
+ 14 11 1 0 0 0
85
+ 11 12 1 0 0 0
86
+ 12 16 1 0 0 0
87
+ 12 13 2 0 0 0
88
+ 16 17 1 0 0 0
89
+ 17 18 1 0 0 0
90
+ 18 20 1 0 0 0
91
+ 18 19 2 0 0 0
92
+ 15 14 1 0 0 0
93
+ 27 21 4 0 0 0
94
+ 23 21 4 0 0 0
95
+ 21 22 1 0 0 0
96
+ 22 34 1 0 0 0
97
+ 34 35 1 0 0 0
98
+ 35 37 2 0 0 0
99
+ 35 36 1 0 0 0
100
+ 24 23 4 0 0 0
101
+ 25 24 4 0 0 0
102
+ 28 25 1 0 0 0
103
+ 25 26 4 0 0 0
104
+ 26 27 4 0 0 0
105
+ 30 28 1 0 0 0
106
+ 28 29 2 0 0 0
107
+ 33 30 1 0 0 0
108
+ 30 31 1 0 0 0
109
+ 31 32 1 0 0 0
110
+ 23 38 1 0 0 0
111
+ 24 39 1 0 0 0
112
+ 33 15 1 0 0 0
113
+ 1 40 1 0 0 0
114
+ 1 41 1 0 0 0
115
+ 1 42 1 0 0 0
116
+ 2 43 1 0 0 0
117
+ 5 44 1 0 0 0
118
+ 6 45 1 0 0 0
119
+ 6 46 1 0 0 0
120
+ 7 47 1 0 0 0
121
+ 7 48 1 0 0 0
122
+ 10 49 1 0 0 0
123
+ 11 50 1 0 0 0
124
+ 14 51 1 0 0 0
125
+ 14 52 1 0 0 0
126
+ 16 53 1 0 0 0
127
+ 17 54 1 0 0 0
128
+ 17 55 1 0 0 0
129
+ 20 56 1 0 0 0
130
+ 26 57 1 0 0 0
131
+ 27 58 1 0 0 0
132
+ 30 59 1 0 0 0
133
+ 31 60 1 0 0 0
134
+ 31 61 1 0 0 0
135
+ 32 62 1 0 0 0
136
+ 32 63 1 0 0 0
137
+ 32 64 1 0 0 0
138
+ 33 65 1 0 0 0
139
+ 33 66 1 0 0 0
140
+ 34 67 1 0 0 0
141
+ 34 68 1 0 0 0
142
+ 36 69 1 0 0 0
143
+ M END
144
+ $$$$
11gs/11gs_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
11gs/11gs_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1b2m/1b2m_ligand.mol2 ADDED
@@ -0,0 +1,90 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:47 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1b2m_ligand
7
+ 36 38 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 O5 4.0000 25.4710 3.6930 O.3 1 G -0.3924
14
+ 2 C5 3.8430 26.7000 2.9930 C.3 1 G 0.0734
15
+ 3 C4 5.1760 27.4360 2.8030 C.3 1 G 0.1191
16
+ 4 O4 5.7250 27.8660 4.0590 O.3 1 G -0.3363
17
+ 5 C3 6.2310 26.5610 2.1290 C.3 1 G 0.1516
18
+ 6 O3 6.9650 27.3510 1.1700 O.3 1 G -0.2743
19
+ 7 C2 7.1510 26.1500 3.2390 C.3 1 G 0.1441
20
+ 8 O2 8.4670 25.9580 2.7500 O.3 1 G -0.3831
21
+ 9 C1 7.0540 27.3140 4.2070 C.3 1 G 0.1996
22
+ 10 N9 7.3240 26.8890 5.6020 N.pl3 1 G -0.2101
23
+ 11 C8 8.3680 27.1870 6.4010 C.2 1 G 0.0957
24
+ 12 N7 8.4500 26.6700 7.5650 N.2 1 G -0.3235
25
+ 13 C5 7.2810 25.8950 7.5590 C.2 1 G 0.0926
26
+ 14 C6 6.7440 25.0900 8.5700 C.2 1 G 0.2135
27
+ 15 O6 7.1980 24.8890 9.6930 O.2 1 G -0.4091
28
+ 16 N1 5.5490 24.5150 8.1910 N.am 1 G -0.1839
29
+ 17 C2 4.9300 24.7060 6.9860 C.2 1 G 0.2340
30
+ 18 N2 3.7830 24.0920 6.7970 N.pl3 1 G -0.2807
31
+ 19 N3 5.4180 25.4680 6.0230 N.2 1 G -0.2765
32
+ 20 C4 6.5910 26.0400 6.3700 C.2 1 G 0.1159
33
+ 21 P 7.0510 27.0080 -0.3950 P.3 1 U34 0.1069
34
+ 22 O1P 7.3140 25.5420 -0.5450 O.co2 1 U34 -0.6222
35
+ 23 O2P 8.0120 27.9420 -0.9840 O.co2 1 U34 -0.6222
36
+ 24 H1 4.3675 25.6419 4.5522 H 1 G 0.2095
37
+ 25 H2 3.1598 27.3469 3.5628 H 1 G 0.0584
38
+ 26 H3 3.4102 26.4909 2.0036 H 1 G 0.0584
39
+ 27 H4 4.9900 28.3179 2.1724 H 1 G 0.0651
40
+ 28 H5 5.7755 25.6871 1.6403 H 1 G 0.0714
41
+ 29 H6 6.8047 25.2208 3.7150 H 1 G 0.0681
42
+ 30 H7 8.7842 26.7692 2.3708 H 1 G 0.2102
43
+ 31 H8 7.7957 28.0779 3.9308 H 1 G 0.0998
44
+ 32 H9 9.1420 27.8694 6.0530 H 1 G 0.1179
45
+ 33 H10 5.0995 23.9108 8.8490 H 1 G 0.2515
46
+ 34 H11 3.2791 24.2050 5.9058 H 1 G 0.1897
47
+ 35 H12 3.3883 23.4980 7.5401 H 1 G 0.1897
48
+ 36 H13 6.1569 27.1909 -0.8231 H 1 U34 0.1780
49
+ @<TRIPOS>BOND
50
+ 1 1 2 1
51
+ 2 2 3 1
52
+ 3 3 4 1
53
+ 4 3 5 1
54
+ 5 4 9 1
55
+ 6 5 6 1
56
+ 7 5 7 1
57
+ 8 6 21 1
58
+ 9 7 8 1
59
+ 10 7 9 1
60
+ 11 9 10 1
61
+ 12 10 11 1
62
+ 13 10 20 1
63
+ 14 11 12 2
64
+ 15 12 13 1
65
+ 16 13 14 1
66
+ 17 13 20 2
67
+ 18 14 15 2
68
+ 19 14 16 am
69
+ 20 16 17 1
70
+ 21 17 18 1
71
+ 22 17 19 2
72
+ 23 19 20 1
73
+ 24 21 22 ar
74
+ 25 21 23 ar
75
+ 26 1 24 1
76
+ 27 2 25 1
77
+ 28 2 26 1
78
+ 29 3 27 1
79
+ 30 5 28 1
80
+ 31 7 29 1
81
+ 32 8 30 1
82
+ 33 9 31 1
83
+ 34 11 32 1
84
+ 35 16 33 1
85
+ 36 18 34 1
86
+ 37 18 35 1
87
+ 38 21 36 1
88
+ @<TRIPOS>SUBSTRUCTURE
89
+ 1 G 1
90
+
1b2m/1b2m_ligand.sdf ADDED
@@ -0,0 +1,80 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1b2m_ligand
2
+ -I-interpret-
3
+
4
+ 36 38 0 0 0 0 0 0 0 0999 V2000
5
+ 4.0000 25.4710 3.6930 O 0 0 0 0 0
6
+ 3.8430 26.7000 2.9930 C 0 0 0 0 0
7
+ 5.1760 27.4360 2.8030 C 0 0 0 0 0
8
+ 5.7250 27.8660 4.0590 O 0 0 0 0 0
9
+ 6.2310 26.5610 2.1290 C 0 0 0 0 0
10
+ 6.9650 27.3510 1.1700 O 0 0 0 0 0
11
+ 7.1510 26.1500 3.2390 C 0 0 0 0 0
12
+ 8.4670 25.9580 2.7500 O 0 0 0 0 0
13
+ 7.0540 27.3140 4.2070 C 0 0 0 0 0
14
+ 7.3240 26.8890 5.6020 N 0 0 0 0 0
15
+ 8.3680 27.1870 6.4010 C 0 0 0 0 0
16
+ 8.4500 26.6700 7.5650 N 0 0 0 0 0
17
+ 7.2810 25.8950 7.5590 C 0 0 0 0 0
18
+ 6.7440 25.0900 8.5700 C 0 0 0 0 0
19
+ 7.1980 24.8890 9.6930 O 0 0 0 0 0
20
+ 5.5490 24.5150 8.1910 N 0 0 0 0 0
21
+ 4.9300 24.7060 6.9860 C 0 0 0 0 0
22
+ 3.7830 24.0920 6.7970 N 0 0 0 0 0
23
+ 5.4180 25.4680 6.0230 N 0 0 0 0 0
24
+ 6.5910 26.0400 6.3700 C 0 0 0 0 0
25
+ 7.0510 27.0080 -0.3950 P 0 0 0 0 0
26
+ 7.3140 25.5420 -0.5450 O 0 0 0 0 0
27
+ 8.0120 27.9420 -0.9840 O 0 0 0 0 0
28
+ 3.1441 25.0468 3.7884 H 0 0 0 0 0
29
+ 3.1832 27.3407 3.5781 H 0 0 0 0 0
30
+ 3.4356 26.4779 2.0067 H 0 0 0 0 0
31
+ 4.9438 28.2924 2.1699 H 0 0 0 0 0
32
+ 5.7960 25.7082 1.6078 H 0 0 0 0 0
33
+ 6.8881 25.2015 3.7074 H 0 0 0 0 0
34
+ 8.4766 25.2134 2.1441 H 0 0 0 0 0
35
+ 7.8084 28.0680 3.9825 H 0 0 0 0 0
36
+ 9.1428 27.8700 6.0527 H 0 0 0 0 0
37
+ 5.0906 23.8987 8.8621 H 0 0 0 0 0
38
+ 3.2820 24.2070 5.9160 H 0 0 0 0 0
39
+ 3.3940 23.5006 7.5314 H 0 0 0 0 0
40
+ 6.6123 25.0466 -0.1162 H 0 0 0 0 0
41
+ 1 2 1 0 0 0
42
+ 2 3 1 0 0 0
43
+ 3 4 1 0 0 0
44
+ 3 5 1 0 0 0
45
+ 4 9 1 0 0 0
46
+ 5 6 1 0 0 0
47
+ 5 7 1 0 0 0
48
+ 6 21 1 0 0 0
49
+ 7 8 1 0 0 0
50
+ 7 9 1 0 0 0
51
+ 9 10 1 0 0 0
52
+ 10 11 4 0 0 0
53
+ 10 20 4 0 0 0
54
+ 11 12 4 0 0 0
55
+ 12 13 4 0 0 0
56
+ 13 14 1 0 0 0
57
+ 13 20 4 0 0 0
58
+ 14 15 2 0 0 0
59
+ 14 16 1 0 0 0
60
+ 16 17 1 0 0 0
61
+ 17 18 1 0 0 0
62
+ 17 19 2 0 0 0
63
+ 19 20 1 0 0 0
64
+ 21 22 1 0 0 0
65
+ 21 23 2 0 0 0
66
+ 1 24 1 0 0 0
67
+ 2 25 1 0 0 0
68
+ 2 26 1 0 0 0
69
+ 3 27 1 0 0 0
70
+ 5 28 1 0 0 0
71
+ 7 29 1 0 0 0
72
+ 8 30 1 0 0 0
73
+ 9 31 1 0 0 0
74
+ 11 32 1 0 0 0
75
+ 16 33 1 0 0 0
76
+ 18 34 1 0 0 0
77
+ 18 35 1 0 0 0
78
+ 22 36 1 0 0 0
79
+ M END
80
+ $$$$
1b2m/1b2m_protein_esmfold_aligned_tr_fix.pdb ADDED
@@ -0,0 +1,788 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ REMARK 1 CREATED WITH OPENMM 8.0, 2023-02-20
2
+ ATOM 1 N ALA A 1 14.687 -1.082 1.082 1.00 0.00 N
3
+ ATOM 2 CA ALA A 1 14.215 -0.925 2.456 1.00 0.00 C
4
+ ATOM 3 C ALA A 1 13.375 0.341 2.607 1.00 0.00 C
5
+ ATOM 4 CB ALA A 1 15.395 -0.894 3.423 1.00 0.00 C
6
+ ATOM 5 O ALA A 1 13.650 1.356 1.963 1.00 0.00 O
7
+ ATOM 6 N CYS A 2 12.226 0.104 3.287 1.00 0.00 N
8
+ ATOM 7 CA CYS A 2 11.318 1.208 3.582 1.00 0.00 C
9
+ ATOM 8 C CYS A 2 11.512 1.708 5.007 1.00 0.00 C
10
+ ATOM 9 CB CYS A 2 9.866 0.776 3.376 1.00 0.00 C
11
+ ATOM 10 O CYS A 2 11.004 1.108 5.956 1.00 0.00 O
12
+ ATOM 11 SG CYS A 2 8.676 2.127 3.535 1.00 0.00 S
13
+ ATOM 12 N ASP A 3 12.332 2.724 5.096 1.00 0.00 N
14
+ ATOM 13 CA ASP A 3 12.608 3.259 6.426 1.00 0.00 C
15
+ ATOM 14 C ASP A 3 11.649 4.397 6.768 1.00 0.00 C
16
+ ATOM 15 CB ASP A 3 14.056 3.746 6.517 1.00 0.00 C
17
+ ATOM 16 O ASP A 3 11.348 4.630 7.941 1.00 0.00 O
18
+ ATOM 17 CG ASP A 3 15.067 2.616 6.432 1.00 0.00 C
19
+ ATOM 18 OD1 ASP A 3 14.850 1.554 7.054 1.00 0.00 O
20
+ ATOM 19 OD2 ASP A 3 16.092 2.790 5.738 1.00 0.00 O
21
+ ATOM 20 N TYR A 4 11.179 5.164 5.748 1.00 0.00 N
22
+ ATOM 21 CA TYR A 4 10.249 6.278 5.887 1.00 0.00 C
23
+ ATOM 22 C TYR A 4 9.062 6.120 4.943 1.00 0.00 C
24
+ ATOM 23 CB TYR A 4 10.957 7.609 5.615 1.00 0.00 C
25
+ ATOM 24 O TYR A 4 9.239 5.993 3.729 1.00 0.00 O
26
+ ATOM 25 CG TYR A 4 12.113 7.882 6.545 1.00 0.00 C
27
+ ATOM 26 CD1 TYR A 4 11.927 8.595 7.727 1.00 0.00 C
28
+ ATOM 27 CD2 TYR A 4 13.394 7.429 6.245 1.00 0.00 C
29
+ ATOM 28 CE1 TYR A 4 12.990 8.852 8.588 1.00 0.00 C
30
+ ATOM 29 CE2 TYR A 4 14.463 7.680 7.097 1.00 0.00 C
31
+ ATOM 30 OH TYR A 4 15.308 8.640 9.113 1.00 0.00 O
32
+ ATOM 31 CZ TYR A 4 14.252 8.390 8.265 1.00 0.00 C
33
+ ATOM 32 N THR A 5 7.934 6.101 5.461 1.00 0.00 N
34
+ ATOM 33 CA THR A 5 6.718 6.025 4.659 1.00 0.00 C
35
+ ATOM 34 C THR A 5 6.005 7.374 4.627 1.00 0.00 C
36
+ ATOM 35 CB THR A 5 5.758 4.949 5.200 1.00 0.00 C
37
+ ATOM 36 O THR A 5 5.576 7.881 5.666 1.00 0.00 O
38
+ ATOM 37 CG2 THR A 5 4.531 4.806 4.306 1.00 0.00 C
39
+ ATOM 38 OG1 THR A 5 6.444 3.691 5.256 1.00 0.00 O
40
+ ATOM 39 N CYS A 6 5.929 7.982 3.555 1.00 0.00 N
41
+ ATOM 40 CA CYS A 6 5.233 9.233 3.278 1.00 0.00 C
42
+ ATOM 41 C CYS A 6 4.028 9.000 2.374 1.00 0.00 C
43
+ ATOM 42 CB CYS A 6 6.181 10.241 2.629 1.00 0.00 C
44
+ ATOM 43 O CYS A 6 4.155 9.007 1.150 1.00 0.00 O
45
+ ATOM 44 SG CYS A 6 7.674 10.563 3.595 1.00 0.00 S
46
+ ATOM 45 N GLY A 7 2.820 8.909 2.960 1.00 0.00 N
47
+ ATOM 46 CA GLY A 7 1.716 8.446 2.133 1.00 0.00 C
48
+ ATOM 47 C GLY A 7 1.996 7.118 1.455 1.00 0.00 C
49
+ ATOM 48 O GLY A 7 2.262 6.118 2.124 1.00 0.00 O
50
+ ATOM 49 N SER A 8 2.001 7.046 0.128 1.00 0.00 N
51
+ ATOM 50 CA SER A 8 2.255 5.820 -0.623 1.00 0.00 C
52
+ ATOM 51 C SER A 8 3.729 5.693 -0.992 1.00 0.00 C
53
+ ATOM 52 CB SER A 8 1.399 5.780 -1.891 1.00 0.00 C
54
+ ATOM 53 O SER A 8 4.158 4.662 -1.516 1.00 0.00 O
55
+ ATOM 54 OG SER A 8 1.655 6.909 -2.706 1.00 0.00 O
56
+ ATOM 55 N ASN A 9 4.509 6.725 -0.713 1.00 0.00 N
57
+ ATOM 56 CA ASN A 9 5.934 6.684 -1.022 1.00 0.00 C
58
+ ATOM 57 C ASN A 9 6.735 6.048 0.112 1.00 0.00 C
59
+ ATOM 58 CB ASN A 9 6.459 8.090 -1.319 1.00 0.00 C
60
+ ATOM 59 O ASN A 9 6.367 6.169 1.281 1.00 0.00 O
61
+ ATOM 60 CG ASN A 9 5.815 8.707 -2.544 1.00 0.00 C
62
+ ATOM 61 ND2 ASN A 9 5.594 10.016 -2.502 1.00 0.00 N
63
+ ATOM 62 OD1 ASN A 9 5.518 8.014 -3.521 1.00 0.00 O
64
+ ATOM 63 N CYS A 10 7.753 5.378 -0.255 1.00 0.00 N
65
+ ATOM 64 CA CYS A 10 8.682 4.763 0.687 1.00 0.00 C
66
+ ATOM 65 C CYS A 10 10.122 5.127 0.349 1.00 0.00 C
67
+ ATOM 66 CB CYS A 10 8.517 3.243 0.685 1.00 0.00 C
68
+ ATOM 67 O CYS A 10 10.534 5.039 -0.810 1.00 0.00 O
69
+ ATOM 68 SG CYS A 10 9.690 2.384 1.758 1.00 0.00 S
70
+ ATOM 69 N TYR A 11 10.780 5.510 1.391 1.00 0.00 N
71
+ ATOM 70 CA TYR A 11 12.168 5.907 1.180 1.00 0.00 C
72
+ ATOM 71 C TYR A 11 13.106 5.117 2.087 1.00 0.00 C
73
+ ATOM 72 CB TYR A 11 12.344 7.408 1.429 1.00 0.00 C
74
+ ATOM 73 O TYR A 11 12.784 4.862 3.250 1.00 0.00 O
75
+ ATOM 74 CG TYR A 11 11.486 8.274 0.538 1.00 0.00 C
76
+ ATOM 75 CD1 TYR A 11 11.801 8.450 -0.807 1.00 0.00 C
77
+ ATOM 76 CD2 TYR A 11 10.361 8.920 1.040 1.00 0.00 C
78
+ ATOM 77 CE1 TYR A 11 11.015 9.249 -1.631 1.00 0.00 C
79
+ ATOM 78 CE2 TYR A 11 9.569 9.722 0.225 1.00 0.00 C
80
+ ATOM 79 OH TYR A 11 9.122 10.672 -1.918 1.00 0.00 O
81
+ ATOM 80 CZ TYR A 11 9.903 9.880 -1.107 1.00 0.00 C
82
+ ATOM 81 N SER A 12 14.213 4.751 1.570 1.00 0.00 N
83
+ ATOM 82 CA SER A 12 15.287 4.180 2.377 1.00 0.00 C
84
+ ATOM 83 C SER A 12 16.084 5.271 3.086 1.00 0.00 C
85
+ ATOM 84 CB SER A 12 16.222 3.338 1.508 1.00 0.00 C
86
+ ATOM 85 O SER A 12 16.029 6.439 2.697 1.00 0.00 O
87
+ ATOM 86 OG SER A 12 16.947 4.157 0.607 1.00 0.00 O
88
+ ATOM 87 N SER A 13 16.816 4.877 4.075 1.00 0.00 N
89
+ ATOM 88 CA SER A 13 17.711 5.818 4.742 1.00 0.00 C
90
+ ATOM 89 C SER A 13 18.729 6.401 3.766 1.00 0.00 C
91
+ ATOM 90 CB SER A 13 18.438 5.136 5.902 1.00 0.00 C
92
+ ATOM 91 O SER A 13 19.133 7.557 3.900 1.00 0.00 O
93
+ ATOM 92 OG SER A 13 17.516 4.700 6.886 1.00 0.00 O
94
+ ATOM 93 N SER A 14 19.124 5.620 2.837 1.00 0.00 N
95
+ ATOM 94 CA SER A 14 20.070 6.116 1.843 1.00 0.00 C
96
+ ATOM 95 C SER A 14 19.431 7.172 0.949 1.00 0.00 C
97
+ ATOM 96 CB SER A 14 20.601 4.964 0.987 1.00 0.00 C
98
+ ATOM 97 O SER A 14 20.082 8.146 0.565 1.00 0.00 O
99
+ ATOM 98 OG SER A 14 19.557 4.380 0.227 1.00 0.00 O
100
+ ATOM 99 N ASP A 15 18.144 6.953 0.526 1.00 0.00 N
101
+ ATOM 100 CA ASP A 15 17.432 7.983 -0.223 1.00 0.00 C
102
+ ATOM 101 C ASP A 15 17.385 9.295 0.556 1.00 0.00 C
103
+ ATOM 102 CB ASP A 15 16.012 7.518 -0.557 1.00 0.00 C
104
+ ATOM 103 O ASP A 15 17.628 10.366 -0.006 1.00 0.00 O
105
+ ATOM 104 CG ASP A 15 15.982 6.374 -1.555 1.00 0.00 C
106
+ ATOM 105 OD1 ASP A 15 16.954 6.207 -2.322 1.00 0.00 O
107
+ ATOM 106 OD2 ASP A 15 14.975 5.634 -1.576 1.00 0.00 O
108
+ ATOM 107 N VAL A 16 17.119 9.230 1.822 1.00 0.00 N
109
+ ATOM 108 CA VAL A 16 16.994 10.398 2.687 1.00 0.00 C
110
+ ATOM 109 C VAL A 16 18.352 11.079 2.835 1.00 0.00 C
111
+ ATOM 110 CB VAL A 16 16.433 10.020 4.076 1.00 0.00 C
112
+ ATOM 111 O VAL A 16 18.458 12.302 2.712 1.00 0.00 O
113
+ ATOM 112 CG1 VAL A 16 16.558 11.192 5.048 1.00 0.00 C
114
+ ATOM 113 CG2 VAL A 16 14.977 9.572 3.959 1.00 0.00 C
115
+ ATOM 114 N SER A 17 19.400 10.322 2.973 1.00 0.00 N
116
+ ATOM 115 CA SER A 17 20.736 10.891 3.127 1.00 0.00 C
117
+ ATOM 116 C SER A 17 21.190 11.587 1.848 1.00 0.00 C
118
+ ATOM 117 CB SER A 17 21.741 9.805 3.512 1.00 0.00 C
119
+ ATOM 118 O SER A 17 21.846 12.630 1.903 1.00 0.00 O
120
+ ATOM 119 OG SER A 17 21.447 9.280 4.796 1.00 0.00 O
121
+ ATOM 120 N THR A 18 20.849 10.981 0.712 1.00 0.00 N
122
+ ATOM 121 CA THR A 18 21.206 11.581 -0.569 1.00 0.00 C
123
+ ATOM 122 C THR A 18 20.517 12.932 -0.744 1.00 0.00 C
124
+ ATOM 123 CB THR A 18 20.834 10.657 -1.743 1.00 0.00 C
125
+ ATOM 124 O THR A 18 21.153 13.914 -1.133 1.00 0.00 O
126
+ ATOM 125 CG2 THR A 18 21.109 11.332 -3.083 1.00 0.00 C
127
+ ATOM 126 OG1 THR A 18 21.608 9.454 -1.659 1.00 0.00 O
128
+ ATOM 127 N ALA A 19 19.243 12.950 -0.511 1.00 0.00 N
129
+ ATOM 128 CA ALA A 19 18.508 14.209 -0.596 1.00 0.00 C
130
+ ATOM 129 C ALA A 19 19.045 15.227 0.404 1.00 0.00 C
131
+ ATOM 130 CB ALA A 19 17.018 13.971 -0.360 1.00 0.00 C
132
+ ATOM 131 O ALA A 19 19.290 16.384 0.052 1.00 0.00 O
133
+ ATOM 132 N GLN A 20 19.301 14.788 1.649 1.00 0.00 N
134
+ ATOM 133 CA GLN A 20 19.829 15.674 2.680 1.00 0.00 C
135
+ ATOM 134 C GLN A 20 21.156 16.294 2.247 1.00 0.00 C
136
+ ATOM 135 CB GLN A 20 20.009 14.918 3.997 1.00 0.00 C
137
+ ATOM 136 O GLN A 20 21.355 17.502 2.384 1.00 0.00 O
138
+ ATOM 137 CG GLN A 20 20.497 15.790 5.146 1.00 0.00 C
139
+ ATOM 138 CD GLN A 20 20.868 14.986 6.378 1.00 0.00 C
140
+ ATOM 139 NE2 GLN A 20 21.509 15.638 7.341 1.00 0.00 N
141
+ ATOM 140 OE1 GLN A 20 20.581 13.788 6.463 1.00 0.00 O
142
+ ATOM 141 N ALA A 21 22.006 15.478 1.744 1.00 0.00 N
143
+ ATOM 142 CA ALA A 21 23.322 15.952 1.323 1.00 0.00 C
144
+ ATOM 143 C ALA A 21 23.202 16.994 0.214 1.00 0.00 C
145
+ ATOM 144 CB ALA A 21 24.186 14.781 0.859 1.00 0.00 C
146
+ ATOM 145 O ALA A 21 23.920 17.996 0.216 1.00 0.00 O
147
+ ATOM 146 N ALA A 22 22.307 16.785 -0.766 1.00 0.00 N
148
+ ATOM 147 CA ALA A 22 22.107 17.728 -1.863 1.00 0.00 C
149
+ ATOM 148 C ALA A 22 21.616 19.077 -1.345 1.00 0.00 C
150
+ ATOM 149 CB ALA A 22 21.120 17.160 -2.879 1.00 0.00 C
151
+ ATOM 150 O ALA A 22 22.136 20.125 -1.732 1.00 0.00 O
152
+ ATOM 151 N GLY A 23 20.580 19.026 -0.472 1.00 0.00 N
153
+ ATOM 152 CA GLY A 23 20.067 20.262 0.100 1.00 0.00 C
154
+ ATOM 153 C GLY A 23 21.090 20.997 0.946 1.00 0.00 C
155
+ ATOM 154 O GLY A 23 21.221 22.219 0.848 1.00 0.00 O
156
+ ATOM 155 N TYR A 24 21.834 20.244 1.750 1.00 0.00 N
157
+ ATOM 156 CA TYR A 24 22.823 20.865 2.624 1.00 0.00 C
158
+ ATOM 157 C TYR A 24 23.941 21.508 1.812 1.00 0.00 C
159
+ ATOM 158 CB TYR A 24 23.408 19.832 3.592 1.00 0.00 C
160
+ ATOM 159 O TYR A 24 24.454 22.567 2.182 1.00 0.00 O
161
+ ATOM 160 CG TYR A 24 24.442 20.401 4.534 1.00 0.00 C
162
+ ATOM 161 CD1 TYR A 24 24.072 21.254 5.572 1.00 0.00 C
163
+ ATOM 162 CD2 TYR A 24 25.788 20.089 4.386 1.00 0.00 C
164
+ ATOM 163 CE1 TYR A 24 25.022 21.782 6.441 1.00 0.00 C
165
+ ATOM 164 CE2 TYR A 24 26.747 20.612 5.250 1.00 0.00 C
166
+ ATOM 165 OH TYR A 24 27.298 21.975 7.129 1.00 0.00 O
167
+ ATOM 166 CZ TYR A 24 26.354 21.456 6.272 1.00 0.00 C
168
+ ATOM 167 N GLN A 25 24.374 20.829 0.694 1.00 0.00 N
169
+ ATOM 168 CA GLN A 25 25.413 21.408 -0.151 1.00 0.00 C
170
+ ATOM 169 C GLN A 25 24.993 22.776 -0.680 1.00 0.00 C
171
+ ATOM 170 CB GLN A 25 25.743 20.472 -1.315 1.00 0.00 C
172
+ ATOM 171 O GLN A 25 25.776 23.727 -0.649 1.00 0.00 O
173
+ ATOM 172 CG GLN A 25 26.878 20.967 -2.200 1.00 0.00 C
174
+ ATOM 173 CD GLN A 25 28.199 21.070 -1.459 1.00 0.00 C
175
+ ATOM 174 NE2 GLN A 25 28.779 22.264 -1.445 1.00 0.00 N
176
+ ATOM 175 OE1 GLN A 25 28.691 20.083 -0.903 1.00 0.00 O
177
+ ATOM 176 N LEU A 26 23.770 22.888 -1.161 1.00 0.00 N
178
+ ATOM 177 CA LEU A 26 23.296 24.176 -1.656 1.00 0.00 C
179
+ ATOM 178 C LEU A 26 23.222 25.198 -0.527 1.00 0.00 C
180
+ ATOM 179 CB LEU A 26 21.922 24.024 -2.314 1.00 0.00 C
181
+ ATOM 180 O LEU A 26 23.531 26.375 -0.728 1.00 0.00 O
182
+ ATOM 181 CG LEU A 26 21.905 23.419 -3.718 1.00 0.00 C
183
+ ATOM 182 CD1 LEU A 26 20.471 23.168 -4.170 1.00 0.00 C
184
+ ATOM 183 CD2 LEU A 26 22.630 24.331 -4.702 1.00 0.00 C
185
+ ATOM 184 N HIS A 27 22.825 24.715 0.657 1.00 0.00 N
186
+ ATOM 185 CA HIS A 27 22.802 25.602 1.816 1.00 0.00 C
187
+ ATOM 186 C HIS A 27 24.192 26.152 2.116 1.00 0.00 C
188
+ ATOM 187 CB HIS A 27 22.251 24.870 3.040 1.00 0.00 C
189
+ ATOM 188 O HIS A 27 24.356 27.357 2.322 1.00 0.00 O
190
+ ATOM 189 CG HIS A 27 22.376 25.647 4.312 1.00 0.00 C
191
+ ATOM 190 CD2 HIS A 27 23.151 25.446 5.404 1.00 0.00 C
192
+ ATOM 191 ND1 HIS A 27 21.642 26.785 4.563 1.00 0.00 N
193
+ ATOM 192 CE1 HIS A 27 21.961 27.253 5.758 1.00 0.00 C
194
+ ATOM 193 NE2 HIS A 27 22.874 26.458 6.290 1.00 0.00 N
195
+ ATOM 194 N GLU A 28 25.170 25.327 2.105 1.00 0.00 N
196
+ ATOM 195 CA GLU A 28 26.545 25.723 2.398 1.00 0.00 C
197
+ ATOM 196 C GLU A 28 27.073 26.699 1.351 1.00 0.00 C
198
+ ATOM 197 CB GLU A 28 27.454 24.494 2.477 1.00 0.00 C
199
+ ATOM 198 O GLU A 28 27.840 27.609 1.673 1.00 0.00 O
200
+ ATOM 199 CG GLU A 28 27.279 23.681 3.752 1.00 0.00 C
201
+ ATOM 200 CD GLU A 28 27.885 24.349 4.977 1.00 0.00 C
202
+ ATOM 201 OE1 GLU A 28 29.130 24.463 5.054 1.00 0.00 O
203
+ ATOM 202 OE2 GLU A 28 27.109 24.762 5.867 1.00 0.00 O
204
+ ATOM 203 N ASP A 29 26.595 26.531 0.102 1.00 0.00 N
205
+ ATOM 204 CA ASP A 29 27.046 27.369 -1.004 1.00 0.00 C
206
+ ATOM 205 C ASP A 29 26.248 28.670 -1.066 1.00 0.00 C
207
+ ATOM 206 CB ASP A 29 26.930 26.617 -2.330 1.00 0.00 C
208
+ ATOM 207 O ASP A 29 26.566 29.562 -1.857 1.00 0.00 O
209
+ ATOM 208 CG ASP A 29 27.917 25.468 -2.448 1.00 0.00 C
210
+ ATOM 209 OD1 ASP A 29 28.943 25.469 -1.735 1.00 0.00 O
211
+ ATOM 210 OD2 ASP A 29 27.666 24.554 -3.264 1.00 0.00 O
212
+ ATOM 211 N GLY A 30 25.251 28.743 -0.213 1.00 0.00 N
213
+ ATOM 212 CA GLY A 30 24.399 29.919 -0.292 1.00 0.00 C
214
+ ATOM 213 C GLY A 30 23.583 29.980 -1.569 1.00 0.00 C
215
+ ATOM 214 O GLY A 30 23.284 31.067 -2.070 1.00 0.00 O
216
+ ATOM 215 N GLU A 31 23.260 28.891 -2.129 1.00 0.00 N
217
+ ATOM 216 CA GLU A 31 22.506 28.779 -3.374 1.00 0.00 C
218
+ ATOM 217 C GLU A 31 21.155 28.108 -3.142 1.00 0.00 C
219
+ ATOM 218 CB GLU A 31 23.308 28.001 -4.419 1.00 0.00 C
220
+ ATOM 219 O GLU A 31 20.980 27.371 -2.170 1.00 0.00 O
221
+ ATOM 220 CG GLU A 31 24.583 28.703 -4.865 1.00 0.00 C
222
+ ATOM 221 CD GLU A 31 25.328 27.956 -5.959 1.00 0.00 C
223
+ ATOM 222 OE1 GLU A 31 24.956 26.800 -6.267 1.00 0.00 O
224
+ ATOM 223 OE2 GLU A 31 26.293 28.529 -6.512 1.00 0.00 O
225
+ ATOM 224 N THR A 32 20.270 28.351 -3.986 1.00 0.00 N
226
+ ATOM 225 CA THR A 32 18.954 27.723 -3.999 1.00 0.00 C
227
+ ATOM 226 C THR A 32 18.538 27.364 -5.423 1.00 0.00 C
228
+ ATOM 227 CB THR A 32 17.891 28.642 -3.368 1.00 0.00 C
229
+ ATOM 228 O THR A 32 19.105 27.879 -6.389 1.00 0.00 O
230
+ ATOM 229 CG2 THR A 32 18.314 29.097 -1.974 1.00 0.00 C
231
+ ATOM 230 OG1 THR A 32 17.710 29.794 -4.200 1.00 0.00 O
232
+ ATOM 231 N VAL A 33 17.619 26.407 -5.519 1.00 0.00 N
233
+ ATOM 232 CA VAL A 33 17.075 26.012 -6.814 1.00 0.00 C
234
+ ATOM 233 C VAL A 33 15.552 25.938 -6.735 1.00 0.00 C
235
+ ATOM 234 CB VAL A 33 17.651 24.656 -7.282 1.00 0.00 C
236
+ ATOM 235 O VAL A 33 14.990 25.727 -5.657 1.00 0.00 O
237
+ ATOM 236 CG1 VAL A 33 19.164 24.748 -7.468 1.00 0.00 C
238
+ ATOM 237 CG2 VAL A 33 17.297 23.554 -6.285 1.00 0.00 C
239
+ ATOM 238 N GLY A 34 14.920 26.102 -7.881 1.00 0.00 N
240
+ ATOM 239 CA GLY A 34 13.475 25.990 -7.996 1.00 0.00 C
241
+ ATOM 240 C GLY A 34 12.745 27.271 -7.638 1.00 0.00 C
242
+ ATOM 241 O GLY A 34 13.320 28.163 -7.008 1.00 0.00 O
243
+ ATOM 242 N SER A 35 11.533 27.364 -7.966 1.00 0.00 N
244
+ ATOM 243 CA SER A 35 10.724 28.570 -7.825 1.00 0.00 C
245
+ ATOM 244 C SER A 35 10.474 28.901 -6.358 1.00 0.00 C
246
+ ATOM 245 CB SER A 35 9.390 28.410 -8.554 1.00 0.00 C
247
+ ATOM 246 O SER A 35 10.210 30.054 -6.011 1.00 0.00 O
248
+ ATOM 247 OG SER A 35 8.674 27.292 -8.053 1.00 0.00 O
249
+ ATOM 248 N ASN A 36 10.609 27.914 -5.497 1.00 0.00 N
250
+ ATOM 249 CA ASN A 36 10.394 28.149 -4.074 1.00 0.00 C
251
+ ATOM 250 C ASN A 36 11.713 28.326 -3.329 1.00 0.00 C
252
+ ATOM 251 CB ASN A 36 9.585 27.006 -3.457 1.00 0.00 C
253
+ ATOM 252 O ASN A 36 11.756 28.232 -2.101 1.00 0.00 O
254
+ ATOM 253 CG ASN A 36 8.135 27.012 -3.897 1.00 0.00 C
255
+ ATOM 254 ND2 ASN A 36 7.523 25.834 -3.940 1.00 0.00 N
256
+ ATOM 255 OD1 ASN A 36 7.569 28.067 -4.198 1.00 0.00 O
257
+ ATOM 256 N SER A 37 12.828 28.403 -4.119 1.00 0.00 N
258
+ ATOM 257 CA SER A 37 14.153 28.707 -3.592 1.00 0.00 C
259
+ ATOM 258 C SER A 37 14.573 27.693 -2.532 1.00 0.00 C
260
+ ATOM 259 CB SER A 37 14.184 30.116 -3.001 1.00 0.00 C
261
+ ATOM 260 O SER A 37 14.951 28.069 -1.422 1.00 0.00 O
262
+ ATOM 261 OG SER A 37 13.846 31.082 -3.981 1.00 0.00 O
263
+ ATOM 262 N TYR A 38 14.514 26.341 -2.824 1.00 0.00 N
264
+ ATOM 263 CA TYR A 38 14.999 25.292 -1.935 1.00 0.00 C
265
+ ATOM 264 C TYR A 38 16.522 25.252 -1.917 1.00 0.00 C
266
+ ATOM 265 CB TYR A 38 14.446 23.928 -2.360 1.00 0.00 C
267
+ ATOM 266 O TYR A 38 17.166 25.436 -2.952 1.00 0.00 O
268
+ ATOM 267 CG TYR A 38 12.980 23.743 -2.050 1.00 0.00 C
269
+ ATOM 268 CD1 TYR A 38 12.552 23.472 -0.753 1.00 0.00 C
270
+ ATOM 269 CD2 TYR A 38 12.022 23.838 -3.053 1.00 0.00 C
271
+ ATOM 270 CE1 TYR A 38 11.202 23.299 -0.462 1.00 0.00 C
272
+ ATOM 271 CE2 TYR A 38 10.670 23.667 -2.774 1.00 0.00 C
273
+ ATOM 272 OH TYR A 38 8.933 23.228 -1.197 1.00 0.00 O
274
+ ATOM 273 CZ TYR A 38 10.270 23.399 -1.478 1.00 0.00 C
275
+ ATOM 274 N PRO A 39 17.160 24.854 -0.919 1.00 0.00 N
276
+ ATOM 275 CA PRO A 39 16.588 24.748 0.426 1.00 0.00 C
277
+ ATOM 276 C PRO A 39 16.281 26.110 1.045 1.00 0.00 C
278
+ ATOM 277 CB PRO A 39 17.678 24.022 1.217 1.00 0.00 C
279
+ ATOM 278 O PRO A 39 16.922 27.106 0.704 1.00 0.00 O
280
+ ATOM 279 CG PRO A 39 18.962 24.460 0.589 1.00 0.00 C
281
+ ATOM 280 CD PRO A 39 18.734 24.646 -0.883 1.00 0.00 C
282
+ ATOM 281 N HIS A 40 15.289 26.238 1.790 1.00 0.00 N
283
+ ATOM 282 CA HIS A 40 14.971 27.421 2.582 1.00 0.00 C
284
+ ATOM 283 C HIS A 40 14.597 27.042 4.012 1.00 0.00 C
285
+ ATOM 284 CB HIS A 40 13.833 28.210 1.935 1.00 0.00 C
286
+ ATOM 285 O HIS A 40 14.325 25.873 4.298 1.00 0.00 O
287
+ ATOM 286 CG HIS A 40 12.572 27.422 1.772 1.00 0.00 C
288
+ ATOM 287 CD2 HIS A 40 11.575 27.149 2.647 1.00 0.00 C
289
+ ATOM 288 ND1 HIS A 40 12.228 26.804 0.589 1.00 0.00 N
290
+ ATOM 289 CE1 HIS A 40 11.070 26.184 0.744 1.00 0.00 C
291
+ ATOM 290 NE2 HIS A 40 10.653 26.378 1.983 1.00 0.00 N
292
+ ATOM 291 N LYS A 41 14.641 27.974 4.866 1.00 0.00 N
293
+ ATOM 292 CA LYS A 41 14.383 27.765 6.288 1.00 0.00 C
294
+ ATOM 293 C LYS A 41 13.013 27.131 6.511 1.00 0.00 C
295
+ ATOM 294 CB LYS A 41 14.480 29.087 7.051 1.00 0.00 C
296
+ ATOM 295 O LYS A 41 12.029 27.531 5.885 1.00 0.00 O
297
+ ATOM 296 CG LYS A 41 14.547 28.926 8.562 1.00 0.00 C
298
+ ATOM 297 CD LYS A 41 14.830 30.254 9.254 1.00 0.00 C
299
+ ATOM 298 CE LYS A 41 14.868 30.099 10.768 1.00 0.00 C
300
+ ATOM 299 NZ LYS A 41 15.220 31.382 11.447 1.00 0.00 N
301
+ ATOM 300 N TYR A 42 12.899 26.141 7.351 1.00 0.00 N
302
+ ATOM 301 CA TYR A 42 11.688 25.508 7.863 1.00 0.00 C
303
+ ATOM 302 C TYR A 42 11.458 25.876 9.325 1.00 0.00 C
304
+ ATOM 303 CB TYR A 42 11.775 23.987 7.714 1.00 0.00 C
305
+ ATOM 304 O TYR A 42 12.291 25.579 10.184 1.00 0.00 O
306
+ ATOM 305 CG TYR A 42 10.563 23.255 8.240 1.00 0.00 C
307
+ ATOM 306 CD1 TYR A 42 9.316 23.413 7.639 1.00 0.00 C
308
+ ATOM 307 CD2 TYR A 42 10.663 22.408 9.339 1.00 0.00 C
309
+ ATOM 308 CE1 TYR A 42 8.196 22.743 8.123 1.00 0.00 C
310
+ ATOM 309 CE2 TYR A 42 9.548 21.733 9.830 1.00 0.00 C
311
+ ATOM 310 OH TYR A 42 7.217 21.241 9.697 1.00 0.00 O
312
+ ATOM 311 CZ TYR A 42 8.322 21.907 9.215 1.00 0.00 C
313
+ ATOM 312 N ASN A 43 10.299 26.441 9.608 1.00 0.00 N
314
+ ATOM 313 CA ASN A 43 10.076 27.058 10.910 1.00 0.00 C
315
+ ATOM 314 C ASN A 43 9.351 26.111 11.863 1.00 0.00 C
316
+ ATOM 315 CB ASN A 43 9.290 28.363 10.760 1.00 0.00 C
317
+ ATOM 316 O ASN A 43 9.093 26.460 13.016 1.00 0.00 O
318
+ ATOM 317 CG ASN A 43 10.094 29.453 10.077 1.00 0.00 C
319
+ ATOM 318 ND2 ASN A 43 9.469 30.149 9.135 1.00 0.00 N
320
+ ATOM 319 OD1 ASN A 43 11.267 29.666 10.394 1.00 0.00 O
321
+ ATOM 320 N ASN A 44 8.965 24.956 11.297 1.00 0.00 N
322
+ ATOM 321 CA ASN A 44 8.321 23.935 12.117 1.00 0.00 C
323
+ ATOM 322 C ASN A 44 7.052 24.465 12.778 1.00 0.00 C
324
+ ATOM 323 CB ASN A 44 9.291 23.406 13.175 1.00 0.00 C
325
+ ATOM 324 O ASN A 44 6.854 24.290 13.981 1.00 0.00 O
326
+ ATOM 325 CG ASN A 44 8.760 22.180 13.892 1.00 0.00 C
327
+ ATOM 326 ND2 ASN A 44 9.207 21.974 15.126 1.00 0.00 N
328
+ ATOM 327 OD1 ASN A 44 7.956 21.423 13.342 1.00 0.00 O
329
+ ATOM 328 N TYR A 45 6.152 25.138 12.133 1.00 0.00 N
330
+ ATOM 329 CA TYR A 45 4.913 25.693 12.664 1.00 0.00 C
331
+ ATOM 330 C TYR A 45 3.975 24.587 13.134 1.00 0.00 C
332
+ ATOM 331 CB TYR A 45 4.214 26.555 11.607 1.00 0.00 C
333
+ ATOM 332 O TYR A 45 3.074 24.830 13.940 1.00 0.00 O
334
+ ATOM 333 CG TYR A 45 4.977 27.806 11.242 1.00 0.00 C
335
+ ATOM 334 CD1 TYR A 45 5.290 28.761 12.208 1.00 0.00 C
336
+ ATOM 335 CD2 TYR A 45 5.384 28.036 9.933 1.00 0.00 C
337
+ ATOM 336 CE1 TYR A 45 5.991 29.915 11.877 1.00 0.00 C
338
+ ATOM 337 CE2 TYR A 45 6.087 29.187 9.591 1.00 0.00 C
339
+ ATOM 338 OH TYR A 45 7.079 31.261 10.234 1.00 0.00 O
340
+ ATOM 339 CZ TYR A 45 6.384 30.120 10.568 1.00 0.00 C
341
+ ATOM 340 N GLU A 46 4.083 23.342 12.652 1.00 0.00 N
342
+ ATOM 341 CA GLU A 46 3.296 22.194 13.095 1.00 0.00 C
343
+ ATOM 342 C GLU A 46 3.729 21.729 14.482 1.00 0.00 C
344
+ ATOM 343 CB GLU A 46 3.415 21.043 12.092 1.00 0.00 C
345
+ ATOM 344 O GLU A 46 3.030 20.943 15.125 1.00 0.00 O
346
+ ATOM 345 CG GLU A 46 2.712 21.304 10.768 1.00 0.00 C
347
+ ATOM 346 CD GLU A 46 3.525 22.167 9.817 1.00 0.00 C
348
+ ATOM 347 OE1 GLU A 46 4.710 22.443 10.111 1.00 0.00 O
349
+ ATOM 348 OE2 GLU A 46 2.972 22.571 8.770 1.00 0.00 O
350
+ ATOM 349 N GLY A 47 4.950 22.157 14.926 1.00 0.00 N
351
+ ATOM 350 CA GLY A 47 5.394 21.837 16.274 1.00 0.00 C
352
+ ATOM 351 C GLY A 47 5.974 20.442 16.395 1.00 0.00 C
353
+ ATOM 352 O GLY A 47 5.837 19.795 17.435 1.00 0.00 O
354
+ ATOM 353 N PHE A 48 6.634 19.939 15.336 1.00 0.00 N
355
+ ATOM 354 CA PHE A 48 7.244 18.615 15.399 1.00 0.00 C
356
+ ATOM 355 C PHE A 48 8.355 18.580 16.442 1.00 0.00 C
357
+ ATOM 356 CB PHE A 48 7.797 18.210 14.029 1.00 0.00 C
358
+ ATOM 357 O PHE A 48 9.105 19.546 16.590 1.00 0.00 O
359
+ ATOM 358 CG PHE A 48 6.748 18.123 12.952 1.00 0.00 C
360
+ ATOM 359 CD1 PHE A 48 5.575 17.410 13.163 1.00 0.00 C
361
+ ATOM 360 CD2 PHE A 48 6.937 18.754 11.731 1.00 0.00 C
362
+ ATOM 361 CE1 PHE A 48 4.602 17.327 12.169 1.00 0.00 C
363
+ ATOM 362 CE2 PHE A 48 5.970 18.676 10.732 1.00 0.00 C
364
+ ATOM 363 CZ PHE A 48 4.804 17.961 10.953 1.00 0.00 C
365
+ ATOM 364 N ASP A 49 8.451 17.522 17.172 1.00 0.00 N
366
+ ATOM 365 CA ASP A 49 9.502 17.314 18.163 1.00 0.00 C
367
+ ATOM 366 C ASP A 49 10.724 16.647 17.534 1.00 0.00 C
368
+ ATOM 367 CB ASP A 49 8.983 16.470 19.328 1.00 0.00 C
369
+ ATOM 368 O ASP A 49 10.915 15.436 17.670 1.00 0.00 O
370
+ ATOM 369 CG ASP A 49 9.942 16.430 20.505 1.00 0.00 C
371
+ ATOM 370 OD1 ASP A 49 10.867 17.269 20.567 1.00 0.00 O
372
+ ATOM 371 OD2 ASP A 49 9.774 15.549 21.376 1.00 0.00 O
373
+ ATOM 372 N PHE A 50 11.595 17.392 16.901 1.00 0.00 N
374
+ ATOM 373 CA PHE A 50 12.810 16.902 16.261 1.00 0.00 C
375
+ ATOM 374 C PHE A 50 13.917 16.697 17.287 1.00 0.00 C
376
+ ATOM 375 CB PHE A 50 13.275 17.873 15.172 1.00 0.00 C
377
+ ATOM 376 O PHE A 50 13.989 17.420 18.284 1.00 0.00 O
378
+ ATOM 377 CG PHE A 50 12.323 17.986 14.012 1.00 0.00 C
379
+ ATOM 378 CD1 PHE A 50 11.750 16.850 13.453 1.00 0.00 C
380
+ ATOM 379 CD2 PHE A 50 12.001 19.228 13.480 1.00 0.00 C
381
+ ATOM 380 CE1 PHE A 50 10.869 16.951 12.377 1.00 0.00 C
382
+ ATOM 381 CE2 PHE A 50 11.121 19.336 12.407 1.00 0.00 C
383
+ ATOM 382 CZ PHE A 50 10.557 18.196 11.857 1.00 0.00 C
384
+ ATOM 383 N SER A 51 14.775 15.752 17.028 1.00 0.00 N
385
+ ATOM 384 CA SER A 51 15.815 15.369 17.979 1.00 0.00 C
386
+ ATOM 385 C SER A 51 17.043 16.263 17.845 1.00 0.00 C
387
+ ATOM 386 CB SER A 51 16.214 13.906 17.775 1.00 0.00 C
388
+ ATOM 387 O SER A 51 18.022 16.095 18.574 1.00 0.00 O
389
+ ATOM 388 OG SER A 51 16.708 13.697 16.464 1.00 0.00 O
390
+ ATOM 389 N VAL A 52 17.013 17.156 16.863 1.00 0.00 N
391
+ ATOM 390 CA VAL A 52 18.091 18.120 16.666 1.00 0.00 C
392
+ ATOM 391 C VAL A 52 17.539 19.540 16.778 1.00 0.00 C
393
+ ATOM 392 CB VAL A 52 18.785 17.924 15.300 1.00 0.00 C
394
+ ATOM 393 O VAL A 52 16.327 19.751 16.693 1.00 0.00 O
395
+ ATOM 394 CG1 VAL A 52 19.397 16.528 15.200 1.00 0.00 C
396
+ ATOM 395 CG2 VAL A 52 17.795 18.160 14.161 1.00 0.00 C
397
+ ATOM 396 N SER A 53 18.402 20.443 16.960 1.00 0.00 N
398
+ ATOM 397 CA SER A 53 17.990 21.813 17.239 1.00 0.00 C
399
+ ATOM 398 C SER A 53 17.859 22.624 15.954 1.00 0.00 C
400
+ ATOM 399 CB SER A 53 18.986 22.492 18.181 1.00 0.00 C
401
+ ATOM 400 O SER A 53 18.476 22.293 14.939 1.00 0.00 O
402
+ ATOM 401 OG SER A 53 20.286 22.501 17.616 1.00 0.00 O
403
+ ATOM 402 N SER A 54 17.002 23.543 15.869 1.00 0.00 N
404
+ ATOM 403 CA SER A 54 16.915 24.527 14.795 1.00 0.00 C
405
+ ATOM 404 C SER A 54 18.221 25.300 14.646 1.00 0.00 C
406
+ ATOM 405 CB SER A 54 15.764 25.500 15.053 1.00 0.00 C
407
+ ATOM 406 O SER A 54 19.087 25.242 15.522 1.00 0.00 O
408
+ ATOM 407 OG SER A 54 16.038 26.318 16.178 1.00 0.00 O
409
+ ATOM 408 N PRO A 55 18.369 26.249 13.640 1.00 0.00 N
410
+ ATOM 409 CA PRO A 55 17.414 26.428 12.544 1.00 0.00 C
411
+ ATOM 410 C PRO A 55 17.348 25.217 11.616 1.00 0.00 C
412
+ ATOM 411 CB PRO A 55 17.951 27.654 11.803 1.00 0.00 C
413
+ ATOM 412 O PRO A 55 18.351 24.525 11.424 1.00 0.00 O
414
+ ATOM 413 CG PRO A 55 19.432 27.601 12.001 1.00 0.00 C
415
+ ATOM 414 CD PRO A 55 19.711 27.029 13.360 1.00 0.00 C
416
+ ATOM 415 N TYR A 56 16.160 24.956 11.110 1.00 0.00 N
417
+ ATOM 416 CA TYR A 56 15.915 23.862 10.177 1.00 0.00 C
418
+ ATOM 417 C TYR A 56 15.793 24.379 8.749 1.00 0.00 C
419
+ ATOM 418 CB TYR A 56 14.645 23.099 10.566 1.00 0.00 C
420
+ ATOM 419 O TYR A 56 15.357 25.512 8.527 1.00 0.00 O
421
+ ATOM 420 CG TYR A 56 14.627 22.643 12.004 1.00 0.00 C
422
+ ATOM 421 CD1 TYR A 56 15.588 21.756 12.486 1.00 0.00 C
423
+ ATOM 422 CD2 TYR A 56 13.650 23.095 12.884 1.00 0.00 C
424
+ ATOM 423 CE1 TYR A 56 15.575 21.332 13.811 1.00 0.00 C
425
+ ATOM 424 CE2 TYR A 56 13.627 22.677 14.210 1.00 0.00 C
426
+ ATOM 425 OH TYR A 56 14.575 21.380 15.976 1.00 0.00 O
427
+ ATOM 426 CZ TYR A 56 14.592 21.797 14.664 1.00 0.00 C
428
+ ATOM 427 N TYR A 57 16.102 23.566 7.888 1.00 0.00 N
429
+ ATOM 428 CA TYR A 57 15.923 23.785 6.457 1.00 0.00 C
430
+ ATOM 429 C TYR A 57 15.232 22.592 5.806 1.00 0.00 C
431
+ ATOM 430 CB TYR A 57 17.272 24.040 5.778 1.00 0.00 C
432
+ ATOM 431 O TYR A 57 15.402 21.452 6.244 1.00 0.00 O
433
+ ATOM 432 CG TYR A 57 18.037 25.202 6.366 1.00 0.00 C
434
+ ATOM 433 CD1 TYR A 57 17.935 26.477 5.814 1.00 0.00 C
435
+ ATOM 434 CD2 TYR A 57 18.861 25.027 7.471 1.00 0.00 C
436
+ ATOM 435 CE1 TYR A 57 18.640 27.550 6.351 1.00 0.00 C
437
+ ATOM 436 CE2 TYR A 57 19.570 26.092 8.016 1.00 0.00 C
438
+ ATOM 437 OH TYR A 57 20.151 28.408 7.985 1.00 0.00 O
439
+ ATOM 438 CZ TYR A 57 19.452 27.349 7.450 1.00 0.00 C
440
+ ATOM 439 N GLU A 58 14.508 22.819 4.803 1.00 0.00 N
441
+ ATOM 440 CA GLU A 58 13.828 21.717 4.129 1.00 0.00 C
442
+ ATOM 441 C GLU A 58 14.259 21.613 2.670 1.00 0.00 C
443
+ ATOM 442 CB GLU A 58 12.309 21.886 4.219 1.00 0.00 C
444
+ ATOM 443 O GLU A 58 14.602 22.619 2.045 1.00 0.00 O
445
+ ATOM 444 CG GLU A 58 11.780 23.094 3.459 1.00 0.00 C
446
+ ATOM 445 CD GLU A 58 10.261 23.163 3.427 1.00 0.00 C
447
+ ATOM 446 OE1 GLU A 58 9.608 22.589 4.328 1.00 0.00 O
448
+ ATOM 447 OE2 GLU A 58 9.720 23.797 2.493 1.00 0.00 O
449
+ ATOM 448 N TRP A 59 14.261 20.409 2.144 1.00 0.00 N
450
+ ATOM 449 CA TRP A 59 14.648 20.014 0.793 1.00 0.00 C
451
+ ATOM 450 C TRP A 59 13.735 18.911 0.267 1.00 0.00 C
452
+ ATOM 451 CB TRP A 59 16.104 19.543 0.766 1.00 0.00 C
453
+ ATOM 452 O TRP A 59 13.427 17.956 0.984 1.00 0.00 O
454
+ ATOM 453 CG TRP A 59 16.614 19.218 -0.605 1.00 0.00 C
455
+ ATOM 454 CD1 TRP A 59 16.739 17.977 -1.166 1.00 0.00 C
456
+ ATOM 455 CD2 TRP A 59 17.072 20.150 -1.589 1.00 0.00 C
457
+ ATOM 456 CE2 TRP A 59 17.460 19.403 -2.724 1.00 0.00 C
458
+ ATOM 457 CE3 TRP A 59 17.191 21.546 -1.624 1.00 0.00 C
459
+ ATOM 458 NE1 TRP A 59 17.248 18.081 -2.439 1.00 0.00 N
460
+ ATOM 459 CH2 TRP A 59 18.066 21.373 -3.886 1.00 0.00 C
461
+ ATOM 460 CZ2 TRP A 59 17.959 20.007 -3.880 1.00 0.00 C
462
+ ATOM 461 CZ3 TRP A 59 17.689 22.145 -2.775 1.00 0.00 C
463
+ ATOM 462 N PRO A 60 13.304 19.056 -0.973 1.00 0.00 N
464
+ ATOM 463 CA PRO A 60 12.420 18.024 -1.520 1.00 0.00 C
465
+ ATOM 464 C PRO A 60 13.110 16.668 -1.657 1.00 0.00 C
466
+ ATOM 465 CB PRO A 60 12.034 18.582 -2.892 1.00 0.00 C
467
+ ATOM 466 O PRO A 60 14.287 16.604 -2.021 1.00 0.00 O
468
+ ATOM 467 CG PRO A 60 12.235 20.058 -2.775 1.00 0.00 C
469
+ ATOM 468 CD PRO A 60 13.441 20.308 -1.915 1.00 0.00 C
470
+ ATOM 469 N ILE A 61 12.479 15.624 -1.370 1.00 0.00 N
471
+ ATOM 470 CA ILE A 61 12.872 14.265 -1.723 1.00 0.00 C
472
+ ATOM 471 C ILE A 61 11.846 13.663 -2.680 1.00 0.00 C
473
+ ATOM 472 CB ILE A 61 13.021 13.375 -0.468 1.00 0.00 C
474
+ ATOM 473 O ILE A 61 10.644 13.677 -2.401 1.00 0.00 O
475
+ ATOM 474 CG1 ILE A 61 13.517 11.978 -0.860 1.00 0.00 C
476
+ ATOM 475 CG2 ILE A 61 11.696 13.292 0.295 1.00 0.00 C
477
+ ATOM 476 CD1 ILE A 61 14.026 11.151 0.313 1.00 0.00 C
478
+ ATOM 477 N LEU A 62 12.316 13.178 -3.796 1.00 0.00 N
479
+ ATOM 478 CA LEU A 62 11.459 12.775 -4.905 1.00 0.00 C
480
+ ATOM 479 C LEU A 62 11.288 11.259 -4.938 1.00 0.00 C
481
+ ATOM 480 CB LEU A 62 12.038 13.263 -6.236 1.00 0.00 C
482
+ ATOM 481 O LEU A 62 12.255 10.518 -4.743 1.00 0.00 O
483
+ ATOM 482 CG LEU A 62 12.343 14.758 -6.334 1.00 0.00 C
484
+ ATOM 483 CD1 LEU A 62 12.930 15.092 -7.702 1.00 0.00 C
485
+ ATOM 484 CD2 LEU A 62 11.084 15.580 -6.073 1.00 0.00 C
486
+ ATOM 485 N SER A 63 10.050 10.890 -5.173 1.00 0.00 N
487
+ ATOM 486 CA SER A 63 9.736 9.466 -5.213 1.00 0.00 C
488
+ ATOM 487 C SER A 63 10.454 8.774 -6.369 1.00 0.00 C
489
+ ATOM 488 CB SER A 63 8.227 9.252 -5.340 1.00 0.00 C
490
+ ATOM 489 O SER A 63 10.645 7.556 -6.348 1.00 0.00 O
491
+ ATOM 490 OG SER A 63 7.726 9.880 -6.505 1.00 0.00 O
492
+ ATOM 491 N SER A 64 10.991 9.535 -7.392 1.00 0.00 N
493
+ ATOM 492 CA SER A 64 11.732 8.993 -8.526 1.00 0.00 C
494
+ ATOM 493 C SER A 64 13.161 8.636 -8.132 1.00 0.00 C
495
+ ATOM 494 CB SER A 64 11.749 9.993 -9.683 1.00 0.00 C
496
+ ATOM 495 O SER A 64 13.856 7.929 -8.866 1.00 0.00 O
497
+ ATOM 496 OG SER A 64 12.420 11.183 -9.309 1.00 0.00 O
498
+ ATOM 497 N GLY A 65 13.585 9.127 -6.998 1.00 0.00 N
499
+ ATOM 498 CA GLY A 65 14.959 8.903 -6.576 1.00 0.00 C
500
+ ATOM 499 C GLY A 65 15.923 9.947 -7.105 1.00 0.00 C
501
+ ATOM 500 O GLY A 65 17.101 9.954 -6.741 1.00 0.00 O
502
+ ATOM 501 N ASP A 66 15.406 10.795 -7.961 1.00 0.00 N
503
+ ATOM 502 CA ASP A 66 16.228 11.854 -8.536 1.00 0.00 C
504
+ ATOM 503 C ASP A 66 16.493 12.959 -7.517 1.00 0.00 C
505
+ ATOM 504 CB ASP A 66 15.557 12.437 -9.782 1.00 0.00 C
506
+ ATOM 505 O ASP A 66 15.662 13.217 -6.643 1.00 0.00 O
507
+ ATOM 506 CG ASP A 66 15.455 11.440 -10.923 1.00 0.00 C
508
+ ATOM 507 OD1 ASP A 66 16.319 10.543 -11.027 1.00 0.00 O
509
+ ATOM 508 OD2 ASP A 66 14.505 11.555 -11.727 1.00 0.00 O
510
+ ATOM 509 N VAL A 67 17.642 13.580 -7.703 1.00 0.00 N
511
+ ATOM 510 CA VAL A 67 17.945 14.768 -6.912 1.00 0.00 C
512
+ ATOM 511 C VAL A 67 17.168 15.964 -7.456 1.00 0.00 C
513
+ ATOM 512 CB VAL A 67 19.459 15.074 -6.905 1.00 0.00 C
514
+ ATOM 513 O VAL A 67 17.145 16.197 -8.668 1.00 0.00 O
515
+ ATOM 514 CG1 VAL A 67 19.736 16.416 -6.228 1.00 0.00 C
516
+ ATOM 515 CG2 VAL A 67 20.228 13.952 -6.209 1.00 0.00 C
517
+ ATOM 516 N TYR A 68 16.480 16.635 -6.605 1.00 0.00 N
518
+ ATOM 517 CA TYR A 68 15.698 17.802 -6.994 1.00 0.00 C
519
+ ATOM 518 C TYR A 68 16.589 18.874 -7.612 1.00 0.00 C
520
+ ATOM 519 CB TYR A 68 14.952 18.378 -5.786 1.00 0.00 C
521
+ ATOM 520 O TYR A 68 17.633 19.219 -7.055 1.00 0.00 O
522
+ ATOM 521 CG TYR A 68 14.189 19.644 -6.090 1.00 0.00 C
523
+ ATOM 522 CD1 TYR A 68 13.076 19.626 -6.927 1.00 0.00 C
524
+ ATOM 523 CD2 TYR A 68 14.580 20.861 -5.541 1.00 0.00 C
525
+ ATOM 524 CE1 TYR A 68 12.371 20.791 -7.212 1.00 0.00 C
526
+ ATOM 525 CE2 TYR A 68 13.882 22.032 -5.817 1.00 0.00 C
527
+ ATOM 526 OH TYR A 68 12.087 23.143 -6.931 1.00 0.00 O
528
+ ATOM 527 CZ TYR A 68 12.781 21.987 -6.653 1.00 0.00 C
529
+ ATOM 528 N SER A 69 16.205 19.367 -8.779 1.00 0.00 N
530
+ ATOM 529 CA SER A 69 17.019 20.333 -9.510 1.00 0.00 C
531
+ ATOM 530 C SER A 69 16.184 21.524 -9.968 1.00 0.00 C
532
+ ATOM 531 CB SER A 69 17.684 19.670 -10.717 1.00 0.00 C
533
+ ATOM 532 O SER A 69 16.639 22.330 -10.783 1.00 0.00 O
534
+ ATOM 533 OG SER A 69 16.708 19.187 -11.626 1.00 0.00 O
535
+ ATOM 534 N GLY A 70 14.953 21.742 -9.527 1.00 0.00 N
536
+ ATOM 535 CA GLY A 70 14.189 22.943 -9.828 1.00 0.00 C
537
+ ATOM 536 C GLY A 70 12.851 22.651 -10.480 1.00 0.00 C
538
+ ATOM 537 O GLY A 70 12.110 23.573 -10.828 1.00 0.00 O
539
+ ATOM 538 N GLY A 71 12.423 21.366 -10.734 1.00 0.00 N
540
+ ATOM 539 CA GLY A 71 11.083 21.033 -11.192 1.00 0.00 C
541
+ ATOM 540 C GLY A 71 10.048 21.065 -10.084 1.00 0.00 C
542
+ ATOM 541 O GLY A 71 10.198 21.804 -9.108 1.00 0.00 O
543
+ ATOM 542 N SER A 72 8.885 20.249 -10.246 1.00 0.00 N
544
+ ATOM 543 CA SER A 72 7.924 20.082 -9.162 1.00 0.00 C
545
+ ATOM 544 C SER A 72 8.567 19.419 -7.948 1.00 0.00 C
546
+ ATOM 545 CB SER A 72 6.725 19.255 -9.629 1.00 0.00 C
547
+ ATOM 546 O SER A 72 9.178 18.355 -8.068 1.00 0.00 O
548
+ ATOM 547 OG SER A 72 5.798 19.071 -8.572 1.00 0.00 O
549
+ ATOM 548 N PRO A 73 8.518 20.073 -6.738 1.00 0.00 N
550
+ ATOM 549 CA PRO A 73 9.176 19.512 -5.555 1.00 0.00 C
551
+ ATOM 550 C PRO A 73 8.424 18.320 -4.971 1.00 0.00 C
552
+ ATOM 551 CB PRO A 73 9.190 20.685 -4.570 1.00 0.00 C
553
+ ATOM 552 O PRO A 73 8.953 17.612 -4.111 1.00 0.00 O
554
+ ATOM 553 CG PRO A 73 8.017 21.524 -4.960 1.00 0.00 C
555
+ ATOM 554 CD PRO A 73 7.876 21.485 -6.454 1.00 0.00 C
556
+ ATOM 555 N GLY A 74 7.195 17.987 -5.548 1.00 0.00 N
557
+ ATOM 556 CA GLY A 74 6.397 16.939 -4.933 1.00 0.00 C
558
+ ATOM 557 C GLY A 74 5.984 17.261 -3.509 1.00 0.00 C
559
+ ATOM 558 O GLY A 74 6.098 18.407 -3.069 1.00 0.00 O
560
+ ATOM 559 N ALA A 75 5.501 16.251 -2.791 1.00 0.00 N
561
+ ATOM 560 CA ALA A 75 4.859 16.473 -1.499 1.00 0.00 C
562
+ ATOM 561 C ALA A 75 5.841 16.249 -0.352 1.00 0.00 C
563
+ ATOM 562 CB ALA A 75 3.646 15.559 -1.343 1.00 0.00 C
564
+ ATOM 563 O ALA A 75 5.594 16.675 0.778 1.00 0.00 O
565
+ ATOM 564 N ASP A 76 6.943 15.574 -0.561 1.00 0.00 N
566
+ ATOM 565 CA ASP A 76 7.767 15.062 0.529 1.00 0.00 C
567
+ ATOM 566 C ASP A 76 9.041 15.888 0.690 1.00 0.00 C
568
+ ATOM 567 CB ASP A 76 8.120 13.592 0.289 1.00 0.00 C
569
+ ATOM 568 O ASP A 76 9.648 16.301 -0.300 1.00 0.00 O
570
+ ATOM 569 CG ASP A 76 6.900 12.724 0.029 1.00 0.00 C
571
+ ATOM 570 OD1 ASP A 76 5.792 13.078 0.484 1.00 0.00 O
572
+ ATOM 571 OD2 ASP A 76 7.051 11.675 -0.634 1.00 0.00 O
573
+ ATOM 572 N ARG A 77 9.462 16.093 1.974 1.00 0.00 N
574
+ ATOM 573 CA ARG A 77 10.644 16.879 2.310 1.00 0.00 C
575
+ ATOM 574 C ARG A 77 11.531 16.136 3.303 1.00 0.00 C
576
+ ATOM 575 CB ARG A 77 10.241 18.239 2.884 1.00 0.00 C
577
+ ATOM 576 O ARG A 77 11.033 15.461 4.206 1.00 0.00 O
578
+ ATOM 577 CG ARG A 77 9.426 19.095 1.928 1.00 0.00 C
579
+ ATOM 578 CD ARG A 77 10.020 19.094 0.526 1.00 0.00 C
580
+ ATOM 579 NE ARG A 77 9.320 20.023 -0.356 1.00 0.00 N
581
+ ATOM 580 NH1 ARG A 77 7.841 18.450 -1.180 1.00 0.00 N
582
+ ATOM 581 NH2 ARG A 77 7.737 20.621 -1.909 1.00 0.00 N
583
+ ATOM 582 CZ ARG A 77 8.301 19.695 -1.147 1.00 0.00 C
584
+ ATOM 583 N VAL A 78 12.858 16.320 3.141 1.00 0.00 N
585
+ ATOM 584 CA VAL A 78 13.782 16.103 4.249 1.00 0.00 C
586
+ ATOM 585 C VAL A 78 14.026 17.418 4.984 1.00 0.00 C
587
+ ATOM 586 CB VAL A 78 15.123 15.508 3.763 1.00 0.00 C
588
+ ATOM 587 O VAL A 78 14.099 18.481 4.362 1.00 0.00 O
589
+ ATOM 588 CG1 VAL A 78 14.893 14.186 3.032 1.00 0.00 C
590
+ ATOM 589 CG2 VAL A 78 15.850 16.502 2.859 1.00 0.00 C
591
+ ATOM 590 N VAL A 79 14.007 17.331 6.288 1.00 0.00 N
592
+ ATOM 591 CA VAL A 79 14.327 18.469 7.145 1.00 0.00 C
593
+ ATOM 592 C VAL A 79 15.659 18.225 7.851 1.00 0.00 C
594
+ ATOM 593 CB VAL A 79 13.212 18.728 8.183 1.00 0.00 C
595
+ ATOM 594 O VAL A 79 15.865 17.169 8.453 1.00 0.00 O
596
+ ATOM 595 CG1 VAL A 79 13.513 19.986 8.995 1.00 0.00 C
597
+ ATOM 596 CG2 VAL A 79 11.857 18.848 7.489 1.00 0.00 C
598
+ ATOM 597 N PHE A 80 16.567 19.185 7.792 1.00 0.00 N
599
+ ATOM 598 CA PHE A 80 17.874 19.102 8.433 1.00 0.00 C
600
+ ATOM 599 C PHE A 80 18.248 20.432 9.074 1.00 0.00 C
601
+ ATOM 600 CB PHE A 80 18.945 18.687 7.419 1.00 0.00 C
602
+ ATOM 601 O PHE A 80 17.638 21.462 8.780 1.00 0.00 O
603
+ ATOM 602 CG PHE A 80 19.076 19.630 6.255 1.00 0.00 C
604
+ ATOM 603 CD1 PHE A 80 18.283 19.475 5.124 1.00 0.00 C
605
+ ATOM 604 CD2 PHE A 80 19.993 20.673 6.289 1.00 0.00 C
606
+ ATOM 605 CE1 PHE A 80 18.402 20.346 4.044 1.00 0.00 C
607
+ ATOM 606 CE2 PHE A 80 20.118 21.547 5.213 1.00 0.00 C
608
+ ATOM 607 CZ PHE A 80 19.322 21.382 4.092 1.00 0.00 C
609
+ ATOM 608 N ASN A 81 19.250 20.422 9.984 1.00 0.00 N
610
+ ATOM 609 CA ASN A 81 19.675 21.678 10.590 1.00 0.00 C
611
+ ATOM 610 C ASN A 81 20.974 22.187 9.972 1.00 0.00 C
612
+ ATOM 611 CB ASN A 81 19.835 21.517 12.103 1.00 0.00 C
613
+ ATOM 612 O ASN A 81 21.489 21.594 9.022 1.00 0.00 O
614
+ ATOM 613 CG ASN A 81 21.044 20.683 12.478 1.00 0.00 C
615
+ ATOM 614 ND2 ASN A 81 21.233 20.461 13.773 1.00 0.00 N
616
+ ATOM 615 OD1 ASN A 81 21.802 20.241 11.610 1.00 0.00 O
617
+ ATOM 616 N GLU A 82 21.483 23.229 10.458 1.00 0.00 N
618
+ ATOM 617 CA GLU A 82 22.613 23.942 9.869 1.00 0.00 C
619
+ ATOM 618 C GLU A 82 23.892 23.113 9.952 1.00 0.00 C
620
+ ATOM 619 CB GLU A 82 22.816 25.293 10.559 1.00 0.00 C
621
+ ATOM 620 O GLU A 82 24.902 23.459 9.337 1.00 0.00 O
622
+ ATOM 621 CG GLU A 82 23.174 25.183 12.034 1.00 0.00 C
623
+ ATOM 622 CD GLU A 82 23.372 26.532 12.707 1.00 0.00 C
624
+ ATOM 623 OE1 GLU A 82 23.507 27.551 11.993 1.00 0.00 O
625
+ ATOM 624 OE2 GLU A 82 23.392 26.569 13.957 1.00 0.00 O
626
+ ATOM 625 N ASN A 83 23.850 22.025 10.707 1.00 0.00 N
627
+ ATOM 626 CA ASN A 83 25.030 21.184 10.874 1.00 0.00 C
628
+ ATOM 627 C ASN A 83 24.869 19.843 10.162 1.00 0.00 C
629
+ ATOM 628 CB ASN A 83 25.326 20.965 12.359 1.00 0.00 C
630
+ ATOM 629 O ASN A 83 25.465 18.845 10.569 1.00 0.00 O
631
+ ATOM 630 CG ASN A 83 25.716 22.244 13.072 1.00 0.00 C
632
+ ATOM 631 ND2 ASN A 83 25.245 22.405 14.303 1.00 0.00 N
633
+ ATOM 632 OD1 ASN A 83 26.435 23.083 12.520 1.00 0.00 O
634
+ ATOM 633 N ASN A 84 23.998 19.859 9.248 1.00 0.00 N
635
+ ATOM 634 CA ASN A 84 23.738 18.688 8.418 1.00 0.00 C
636
+ ATOM 635 C ASN A 84 23.215 17.517 9.248 1.00 0.00 C
637
+ ATOM 636 CB ASN A 84 25.000 18.277 7.657 1.00 0.00 C
638
+ ATOM 637 O ASN A 84 23.511 16.359 8.949 1.00 0.00 O
639
+ ATOM 638 CG ASN A 84 24.705 17.350 6.494 1.00 0.00 C
640
+ ATOM 639 ND2 ASN A 84 25.706 16.583 6.079 1.00 0.00 N
641
+ ATOM 640 OD1 ASN A 84 23.587 17.325 5.972 1.00 0.00 O
642
+ ATOM 641 N GLN A 85 22.575 17.746 10.325 1.00 0.00 N
643
+ ATOM 642 CA GLN A 85 21.886 16.719 11.101 1.00 0.00 C
644
+ ATOM 643 C GLN A 85 20.431 16.583 10.662 1.00 0.00 C
645
+ ATOM 644 CB GLN A 85 21.957 17.036 12.595 1.00 0.00 C
646
+ ATOM 645 O GLN A 85 19.729 17.582 10.503 1.00 0.00 O
647
+ ATOM 646 CG GLN A 85 23.376 17.182 13.126 1.00 0.00 C
648
+ ATOM 647 CD GLN A 85 23.419 17.652 14.568 1.00 0.00 C
649
+ ATOM 648 NE2 GLN A 85 23.998 16.836 15.442 1.00 0.00 N
650
+ ATOM 649 OE1 GLN A 85 22.935 18.741 14.894 1.00 0.00 O
651
+ ATOM 650 N LEU A 86 20.069 15.424 10.438 1.00 0.00 N
652
+ ATOM 651 CA LEU A 86 18.699 15.147 10.020 1.00 0.00 C
653
+ ATOM 652 C LEU A 86 17.718 15.431 11.153 1.00 0.00 C
654
+ ATOM 653 CB LEU A 86 18.563 13.691 9.565 1.00 0.00 C
655
+ ATOM 654 O LEU A 86 17.868 14.905 12.258 1.00 0.00 O
656
+ ATOM 655 CG LEU A 86 17.184 13.267 9.055 1.00 0.00 C
657
+ ATOM 656 CD1 LEU A 86 16.841 14.015 7.771 1.00 0.00 C
658
+ ATOM 657 CD2 LEU A 86 17.138 11.760 8.831 1.00 0.00 C
659
+ ATOM 658 N ALA A 87 16.765 16.268 10.893 1.00 0.00 N
660
+ ATOM 659 CA ALA A 87 15.677 16.497 11.842 1.00 0.00 C
661
+ ATOM 660 C ALA A 87 14.548 15.494 11.633 1.00 0.00 C
662
+ ATOM 661 CB ALA A 87 15.148 17.924 11.711 1.00 0.00 C
663
+ ATOM 662 O ALA A 87 14.019 14.935 12.597 1.00 0.00 O
664
+ ATOM 663 N GLY A 88 14.131 15.253 10.375 1.00 0.00 N
665
+ ATOM 664 CA GLY A 88 13.059 14.325 10.055 1.00 0.00 C
666
+ ATOM 665 C GLY A 88 12.646 14.370 8.595 1.00 0.00 C
667
+ ATOM 666 O GLY A 88 13.271 15.063 7.789 1.00 0.00 O
668
+ ATOM 667 N VAL A 89 11.770 13.592 8.255 1.00 0.00 N
669
+ ATOM 668 CA VAL A 89 11.133 13.554 6.943 1.00 0.00 C
670
+ ATOM 669 C VAL A 89 9.639 13.836 7.084 1.00 0.00 C
671
+ ATOM 670 CB VAL A 89 11.355 12.194 6.243 1.00 0.00 C
672
+ ATOM 671 O VAL A 89 8.970 13.252 7.940 1.00 0.00 O
673
+ ATOM 672 CG1 VAL A 89 10.834 12.233 4.808 1.00 0.00 C
674
+ ATOM 673 CG2 VAL A 89 12.835 11.817 6.268 1.00 0.00 C
675
+ ATOM 674 N ILE A 90 9.143 14.749 6.282 1.00 0.00 N
676
+ ATOM 675 CA ILE A 90 7.762 15.197 6.424 1.00 0.00 C
677
+ ATOM 676 C ILE A 90 7.077 15.196 5.059 1.00 0.00 C
678
+ ATOM 677 CB ILE A 90 7.686 16.602 7.060 1.00 0.00 C
679
+ ATOM 678 O ILE A 90 7.740 15.107 4.023 1.00 0.00 O
680
+ ATOM 679 CG1 ILE A 90 8.444 17.620 6.199 1.00 0.00 C
681
+ ATOM 680 CG2 ILE A 90 8.235 16.578 8.490 1.00 0.00 C
682
+ ATOM 681 CD1 ILE A 90 8.331 19.056 6.694 1.00 0.00 C
683
+ ATOM 682 N THR A 91 5.759 15.240 5.109 1.00 0.00 N
684
+ ATOM 683 CA THR A 91 5.014 15.200 3.856 1.00 0.00 C
685
+ ATOM 684 C THR A 91 3.733 16.020 3.962 1.00 0.00 C
686
+ ATOM 685 CB THR A 91 4.669 13.753 3.457 1.00 0.00 C
687
+ ATOM 686 O THR A 91 3.152 16.137 5.044 1.00 0.00 O
688
+ ATOM 687 CG2 THR A 91 3.786 13.089 4.510 1.00 0.00 C
689
+ ATOM 688 OG1 THR A 91 3.974 13.762 2.204 1.00 0.00 O
690
+ ATOM 689 N HIS A 92 3.377 16.505 2.755 1.00 0.00 N
691
+ ATOM 690 CA HIS A 92 2.078 17.162 2.660 1.00 0.00 C
692
+ ATOM 691 C HIS A 92 0.949 16.140 2.563 1.00 0.00 C
693
+ ATOM 692 CB HIS A 92 2.039 18.102 1.455 1.00 0.00 C
694
+ ATOM 693 O HIS A 92 -0.212 16.466 2.820 1.00 0.00 O
695
+ ATOM 694 CG HIS A 92 2.853 19.344 1.637 1.00 0.00 C
696
+ ATOM 695 CD2 HIS A 92 3.931 19.809 0.960 1.00 0.00 C
697
+ ATOM 696 ND1 HIS A 92 2.587 20.271 2.621 1.00 0.00 N
698
+ ATOM 697 CE1 HIS A 92 3.466 21.256 2.540 1.00 0.00 C
699
+ ATOM 698 NE2 HIS A 92 4.292 20.999 1.540 1.00 0.00 N
700
+ ATOM 699 N THR A 93 1.254 15.000 2.160 1.00 0.00 N
701
+ ATOM 700 CA THR A 93 0.219 13.986 1.991 1.00 0.00 C
702
+ ATOM 701 C THR A 93 -0.464 13.683 3.322 1.00 0.00 C
703
+ ATOM 702 CB THR A 93 0.800 12.687 1.401 1.00 0.00 C
704
+ ATOM 703 O THR A 93 0.200 13.331 4.299 1.00 0.00 O
705
+ ATOM 704 CG2 THR A 93 -0.290 11.639 1.200 1.00 0.00 C
706
+ ATOM 705 OG1 THR A 93 1.410 12.975 0.137 1.00 0.00 O
707
+ ATOM 706 N GLY A 94 -1.737 13.870 3.288 1.00 0.00 N
708
+ ATOM 707 CA GLY A 94 -2.496 13.563 4.490 1.00 0.00 C
709
+ ATOM 708 C GLY A 94 -2.603 14.738 5.444 1.00 0.00 C
710
+ ATOM 709 O GLY A 94 -3.228 14.630 6.502 1.00 0.00 O
711
+ ATOM 710 N ALA A 95 -1.969 15.832 5.125 1.00 0.00 N
712
+ ATOM 711 CA ALA A 95 -2.073 17.036 5.945 1.00 0.00 C
713
+ ATOM 712 C ALA A 95 -3.210 17.933 5.462 1.00 0.00 C
714
+ ATOM 713 CB ALA A 95 -0.753 17.803 5.935 1.00 0.00 C
715
+ ATOM 714 O ALA A 95 -3.617 17.857 4.301 1.00 0.00 O
716
+ ATOM 715 N SER A 96 -3.768 18.635 6.363 1.00 0.00 N
717
+ ATOM 716 CA SER A 96 -4.782 19.617 5.993 1.00 0.00 C
718
+ ATOM 717 C SER A 96 -4.147 20.884 5.429 1.00 0.00 C
719
+ ATOM 718 CB SER A 96 -5.653 19.969 7.200 1.00 0.00 C
720
+ ATOM 719 O SER A 96 -3.164 21.388 5.975 1.00 0.00 O
721
+ ATOM 720 OG SER A 96 -4.904 20.682 8.170 1.00 0.00 O
722
+ ATOM 721 N GLY A 97 -4.606 21.340 4.353 1.00 0.00 N
723
+ ATOM 722 CA GLY A 97 -4.061 22.560 3.780 1.00 0.00 C
724
+ ATOM 723 C GLY A 97 -2.597 22.437 3.402 1.00 0.00 C
725
+ ATOM 724 O GLY A 97 -2.170 21.410 2.870 1.00 0.00 O
726
+ ATOM 725 N ASN A 98 -1.793 23.466 3.675 1.00 0.00 N
727
+ ATOM 726 CA ASN A 98 -0.377 23.509 3.324 1.00 0.00 C
728
+ ATOM 727 C ASN A 98 0.502 23.048 4.484 1.00 0.00 C
729
+ ATOM 728 CB ASN A 98 0.025 24.917 2.882 1.00 0.00 C
730
+ ATOM 729 O ASN A 98 1.696 23.351 4.522 1.00 0.00 O
731
+ ATOM 730 CG ASN A 98 -0.384 25.219 1.454 1.00 0.00 C
732
+ ATOM 731 ND2 ASN A 98 -0.435 26.501 1.110 1.00 0.00 N
733
+ ATOM 732 OD1 ASN A 98 -0.653 24.308 0.665 1.00 0.00 O
734
+ ATOM 733 N ASN A 99 -0.087 22.302 5.428 1.00 0.00 N
735
+ ATOM 734 CA ASN A 99 0.665 21.800 6.574 1.00 0.00 C
736
+ ATOM 735 C ASN A 99 1.450 20.540 6.221 1.00 0.00 C
737
+ ATOM 736 CB ASN A 99 -0.272 21.529 7.753 1.00 0.00 C
738
+ ATOM 737 O ASN A 99 1.338 20.026 5.107 1.00 0.00 O
739
+ ATOM 738 CG ASN A 99 -0.863 22.800 8.333 1.00 0.00 C
740
+ ATOM 739 ND2 ASN A 99 -2.105 22.719 8.796 1.00 0.00 N
741
+ ATOM 740 OD1 ASN A 99 -0.209 23.845 8.364 1.00 0.00 O
742
+ ATOM 741 N PHE A 100 2.232 20.066 7.134 1.00 0.00 N
743
+ ATOM 742 CA PHE A 100 2.993 18.830 6.995 1.00 0.00 C
744
+ ATOM 743 C PHE A 100 2.613 17.836 8.086 1.00 0.00 C
745
+ ATOM 744 CB PHE A 100 4.498 19.115 7.045 1.00 0.00 C
746
+ ATOM 745 O PHE A 100 2.159 18.230 9.162 1.00 0.00 O
747
+ ATOM 746 CG PHE A 100 5.014 19.866 5.848 1.00 0.00 C
748
+ ATOM 747 CD1 PHE A 100 5.284 19.203 4.658 1.00 0.00 C
749
+ ATOM 748 CD2 PHE A 100 5.228 21.237 5.913 1.00 0.00 C
750
+ ATOM 749 CE1 PHE A 100 5.763 19.896 3.547 1.00 0.00 C
751
+ ATOM 750 CE2 PHE A 100 5.705 21.937 4.808 1.00 0.00 C
752
+ ATOM 751 CZ PHE A 100 5.973 21.264 3.627 1.00 0.00 C
753
+ ATOM 752 N VAL A 101 2.743 16.601 7.805 1.00 0.00 N
754
+ ATOM 753 CA VAL A 101 2.783 15.531 8.796 1.00 0.00 C
755
+ ATOM 754 C VAL A 101 4.108 14.781 8.694 1.00 0.00 C
756
+ ATOM 755 CB VAL A 101 1.601 14.552 8.620 1.00 0.00 C
757
+ ATOM 756 O VAL A 101 4.733 14.753 7.631 1.00 0.00 O
758
+ ATOM 757 CG1 VAL A 101 0.270 15.262 8.863 1.00 0.00 C
759
+ ATOM 758 CG2 VAL A 101 1.629 13.927 7.227 1.00 0.00 C
760
+ ATOM 759 N GLU A 102 4.564 14.251 9.827 1.00 0.00 N
761
+ ATOM 760 CA GLU A 102 5.813 13.498 9.801 1.00 0.00 C
762
+ ATOM 761 C GLU A 102 5.629 12.146 9.119 1.00 0.00 C
763
+ ATOM 762 CB GLU A 102 6.353 13.301 11.220 1.00 0.00 C
764
+ ATOM 763 O GLU A 102 4.616 11.474 9.323 1.00 0.00 O
765
+ ATOM 764 CG GLU A 102 6.854 14.582 11.871 1.00 0.00 C
766
+ ATOM 765 CD GLU A 102 7.517 14.351 13.219 1.00 0.00 C
767
+ ATOM 766 OE1 GLU A 102 8.617 13.753 13.260 1.00 0.00 O
768
+ ATOM 767 OE2 GLU A 102 6.934 14.770 14.243 1.00 0.00 O
769
+ ATOM 768 N CYS A 103 6.556 11.886 8.251 1.00 0.00 N
770
+ ATOM 769 CA CYS A 103 6.571 10.544 7.680 1.00 0.00 C
771
+ ATOM 770 C CYS A 103 6.885 9.502 8.747 1.00 0.00 C
772
+ ATOM 771 CB CYS A 103 7.593 10.453 6.548 1.00 0.00 C
773
+ ATOM 772 O CYS A 103 7.562 9.800 9.732 1.00 0.00 O
774
+ ATOM 773 SG CYS A 103 7.332 11.661 5.232 1.00 0.00 S
775
+ ATOM 774 N THR A 104 6.320 8.223 8.653 1.00 0.00 N
776
+ ATOM 775 CA THR A 104 6.526 7.161 9.633 1.00 0.00 C
777
+ ATOM 776 C THR A 104 7.619 6.203 9.169 1.00 0.00 C
778
+ ATOM 777 CB THR A 104 5.226 6.377 9.888 1.00 0.00 C
779
+ ATOM 778 O THR A 104 7.859 6.061 7.969 1.00 0.00 O
780
+ ATOM 779 CG2 THR A 104 4.135 7.286 10.446 1.00 0.00 C
781
+ ATOM 780 OG1 THR A 104 4.769 5.805 8.656 1.00 0.00 O
782
+ ATOM 781 OXT THR A 104 7.809 5.971 10.344 1.00 0.00 O
783
+ TER 782 THR A 104
784
+ CONECT 11 68
785
+ CONECT 44 773
786
+ CONECT 68 11
787
+ CONECT 773 44
788
+ END
1b2m/1b2m_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1ciz/1ciz_ligand.mol2 ADDED
@@ -0,0 +1,148 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:47 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1ciz_ligand
7
+ 64 68 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 N1 25.4560 51.1780 -2.3930 N.pl3 1 DPS -0.3085
14
+ 2 C2 27.6610 50.2570 -1.9370 C.ar 1 DPS -0.0425
15
+ 3 C3 28.6140 49.7750 -1.0260 C.ar 1 DPS -0.0471
16
+ 4 C4 28.2770 49.7360 0.3420 C.ar 1 DPS 0.0948
17
+ 5 C5 26.9820 50.0630 0.7910 C.ar 1 DPS -0.0471
18
+ 6 N7 32.5770 44.3250 0.6390 N.pl3 1 DPS -0.2891
19
+ 7 C8 29.0070 46.6580 2.0550 C.3 1 DPS 0.0938
20
+ 8 C10 20.9740 54.5130 -6.9150 C.ar 1 DPS -0.0687
21
+ 9 C11 23.6950 52.6150 -4.2130 C.3 1 DPS -0.0038
22
+ 10 C12 21.2610 55.1230 -5.6720 C.ar 1 DPS -0.0686
23
+ 11 O1 28.9740 49.5700 2.8350 O.2 1 DPS -0.1519
24
+ 12 O2 30.7430 49.9880 1.1760 O.2 1 DPS -0.1519
25
+ 13 C1 26.3820 50.6810 -1.4920 C.ar 1 DPS 0.0403
26
+ 14 C6 26.0370 50.5360 -0.1270 C.ar 1 DPS -0.0425
27
+ 15 S 29.5300 49.3390 1.5320 S.o2 1 DPS 0.0641
28
+ 16 C7 25.0140 52.0770 -4.7440 C.3 1 DPS -0.0206
29
+ 17 C13 23.4350 52.6960 -2.7220 C.3 1 DPS -0.0206
30
+ 18 C15 24.1100 51.5760 -1.9360 C.3 1 DPS 0.0288
31
+ 19 C18 25.7170 51.0580 -3.8440 C.3 1 DPS 0.0288
32
+ 20 C14 22.1510 54.4840 -4.7830 C.ar 1 DPS -0.0601
33
+ 21 C16 22.7440 53.2500 -5.1440 C.ar 1 DPS -0.0398
34
+ 22 C17 22.4440 52.6430 -6.3870 C.ar 1 DPS -0.0601
35
+ 23 C19 21.5540 53.2750 -7.2800 C.ar 1 DPS -0.0686
36
+ 24 N 29.9310 47.6640 1.5190 N.am 1 DPS -0.2316
37
+ 25 C20 29.7920 45.5460 2.7920 C.3 1 DPS -0.0048
38
+ 26 C9 28.1190 46.1410 0.9550 C.2 1 DPS 0.0576
39
+ 27 O3 26.8490 45.7360 1.2070 O.co2 1 DPS -0.5669
40
+ 28 O4 28.5190 46.0620 -0.1600 O.co2 1 DPS -0.5669
41
+ 29 C21 30.4940 41.4500 -0.6950 C.ar 1 DPS -0.0768
42
+ 30 C22 31.6400 42.2650 -0.5800 C.ar 1 DPS -0.0443
43
+ 31 C23 31.6280 43.3590 0.3160 C.ar 1 DPS 0.0603
44
+ 32 C24 30.4570 43.6210 1.0980 C.ar 1 DPS -0.0214
45
+ 33 C25 29.3150 42.7940 0.9730 C.ar 1 DPS -0.0747
46
+ 34 C26 29.3390 41.7040 0.0760 C.ar 1 DPS -0.0792
47
+ 35 C27 32.0520 45.1740 1.5630 C.2 1 DPS 0.0166
48
+ 36 C28 30.7380 44.8020 1.8830 C.2 1 DPS -0.0428
49
+ 37 H1 27.9048 50.3059 -2.9921 H 1 DPS 0.0515
50
+ 38 H2 29.5871 49.4404 -1.3669 H 1 DPS 0.0602
51
+ 39 H3 26.7202 49.9494 1.8368 H 1 DPS 0.0602
52
+ 40 H4 33.5253 44.3869 0.2417 H 1 DPS 0.2216
53
+ 41 H5 28.3602 47.1494 2.7968 H 1 DPS 0.0694
54
+ 42 H6 20.2953 55.0042 -7.6028 H 1 DPS 0.0559
55
+ 43 H7 23.2053 51.6335 -4.2956 H 1 DPS 0.0462
56
+ 44 H8 20.8034 56.0689 -5.4057 H 1 DPS 0.0599
57
+ 45 H9 25.0384 50.7919 0.2084 H 1 DPS 0.0515
58
+ 46 H10 25.6947 52.9290 -4.8882 H 1 DPS 0.0309
59
+ 47 H11 24.8186 51.5956 -5.7135 H 1 DPS 0.0309
60
+ 48 H12 23.8133 53.6605 -2.3524 H 1 DPS 0.0309
61
+ 49 H13 22.3497 52.6383 -2.5521 H 1 DPS 0.0309
62
+ 50 H14 24.1944 51.9043 -0.8895 H 1 DPS 0.0515
63
+ 51 H15 23.4612 50.6894 -1.9910 H 1 DPS 0.0515
64
+ 52 H16 25.3975 50.0541 -4.1605 H 1 DPS 0.0515
65
+ 53 H17 26.8007 51.1641 -3.9999 H 1 DPS 0.0515
66
+ 54 H18 22.3804 54.9370 -3.8253 H 1 DPS 0.0557
67
+ 55 H19 22.8973 51.6946 -6.6519 H 1 DPS 0.0557
68
+ 56 H20 21.3172 52.8181 -8.2341 H 1 DPS 0.0599
69
+ 57 H21 30.8089 47.3720 1.1395 H 1 DPS 0.1697
70
+ 58 H22 29.0732 44.8288 3.2149 H 1 DPS 0.0386
71
+ 59 H23 30.3733 46.0052 3.6051 H 1 DPS 0.0386
72
+ 60 H24 30.5005 40.6153 -1.3866 H 1 DPS 0.0530
73
+ 61 H25 32.5223 42.0543 -1.1735 H 1 DPS 0.0541
74
+ 62 H26 28.4278 42.9963 1.5621 H 1 DPS 0.0540
75
+ 63 H27 28.4707 41.0623 -0.0207 H 1 DPS 0.0510
76
+ 64 H28 32.5785 46.0241 1.9942 H 1 DPS 0.0795
77
+ @<TRIPOS>BOND
78
+ 1 1 19 1
79
+ 2 1 18 1
80
+ 3 1 13 1
81
+ 4 13 14 ar
82
+ 5 13 2 ar
83
+ 6 2 3 ar
84
+ 7 3 4 ar
85
+ 8 4 15 1
86
+ 9 4 5 ar
87
+ 10 5 14 ar
88
+ 11 15 11 2
89
+ 12 15 12 2
90
+ 13 15 24 am
91
+ 14 24 7 1
92
+ 15 7 25 1
93
+ 16 7 26 1
94
+ 17 26 28 ar
95
+ 18 26 27 ar
96
+ 19 25 36 1
97
+ 20 36 35 2
98
+ 21 36 32 1
99
+ 22 32 33 ar
100
+ 23 32 31 ar
101
+ 24 31 6 1
102
+ 25 31 30 ar
103
+ 26 30 29 ar
104
+ 27 29 34 ar
105
+ 28 34 33 ar
106
+ 29 6 35 1
107
+ 30 18 17 1
108
+ 31 17 9 1
109
+ 32 9 16 1
110
+ 33 9 21 1
111
+ 34 21 22 ar
112
+ 35 21 20 ar
113
+ 36 20 10 ar
114
+ 37 10 8 ar
115
+ 38 8 23 ar
116
+ 39 23 22 ar
117
+ 40 16 19 1
118
+ 41 2 37 1
119
+ 42 3 38 1
120
+ 43 5 39 1
121
+ 44 6 40 1
122
+ 45 7 41 1
123
+ 46 8 42 1
124
+ 47 9 43 1
125
+ 48 10 44 1
126
+ 49 14 45 1
127
+ 50 16 46 1
128
+ 51 16 47 1
129
+ 52 17 48 1
130
+ 53 17 49 1
131
+ 54 18 50 1
132
+ 55 18 51 1
133
+ 56 19 52 1
134
+ 57 19 53 1
135
+ 58 20 54 1
136
+ 59 22 55 1
137
+ 60 23 56 1
138
+ 61 24 57 1
139
+ 62 25 58 1
140
+ 63 25 59 1
141
+ 64 29 60 1
142
+ 65 30 61 1
143
+ 66 33 62 1
144
+ 67 34 63 1
145
+ 68 35 64 1
146
+ @<TRIPOS>SUBSTRUCTURE
147
+ 1 DPS 1
148
+
1ciz/1ciz_ligand.sdf ADDED
@@ -0,0 +1,138 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1ciz_ligand
2
+ -I-interpret-
3
+
4
+ 64 68 0 0 0 0 0 0 0 0999 V2000
5
+ 25.4560 51.1780 -2.3930 N 0 0 0 0 0
6
+ 27.6610 50.2570 -1.9370 C 0 0 0 0 0
7
+ 28.6140 49.7750 -1.0260 C 0 0 0 0 0
8
+ 28.2770 49.7360 0.3420 C 0 0 0 0 0
9
+ 26.9820 50.0630 0.7910 C 0 0 0 0 0
10
+ 32.5770 44.3250 0.6390 N 0 0 0 0 0
11
+ 29.0070 46.6580 2.0550 C 0 0 0 0 0
12
+ 20.9740 54.5130 -6.9150 C 0 0 0 0 0
13
+ 23.6950 52.6150 -4.2130 C 0 0 0 0 0
14
+ 21.2610 55.1230 -5.6720 C 0 0 0 0 0
15
+ 28.9740 49.5700 2.8350 O 0 0 0 0 0
16
+ 30.7430 49.9880 1.1760 O 0 0 0 0 0
17
+ 26.3820 50.6810 -1.4920 C 0 0 0 0 0
18
+ 26.0370 50.5360 -0.1270 C 0 0 0 0 0
19
+ 29.5300 49.3390 1.5320 S 0 0 0 0 0
20
+ 25.0140 52.0770 -4.7440 C 0 0 0 0 0
21
+ 23.4350 52.6960 -2.7220 C 0 0 0 0 0
22
+ 24.1100 51.5760 -1.9360 C 0 0 0 0 0
23
+ 25.7170 51.0580 -3.8440 C 0 0 0 0 0
24
+ 22.1510 54.4840 -4.7830 C 0 0 0 0 0
25
+ 22.7440 53.2500 -5.1440 C 0 0 0 0 0
26
+ 22.4440 52.6430 -6.3870 C 0 0 0 0 0
27
+ 21.5540 53.2750 -7.2800 C 0 0 0 0 0
28
+ 29.9310 47.6640 1.5190 N 0 0 0 0 0
29
+ 29.7920 45.5460 2.7920 C 0 0 0 0 0
30
+ 28.1190 46.1410 0.9550 C 0 0 0 0 0
31
+ 26.8490 45.7360 1.2070 O 0 0 0 0 0
32
+ 28.5190 46.0620 -0.1600 O 0 0 0 0 0
33
+ 30.4940 41.4500 -0.6950 C 0 0 0 0 0
34
+ 31.6400 42.2650 -0.5800 C 0 0 0 0 0
35
+ 31.6280 43.3590 0.3160 C 0 0 0 0 0
36
+ 30.4570 43.6210 1.0980 C 0 0 0 0 0
37
+ 29.3150 42.7940 0.9730 C 0 0 0 0 0
38
+ 29.3390 41.7040 0.0760 C 0 0 0 0 0
39
+ 32.0520 45.1740 1.5630 C 0 0 0 0 0
40
+ 30.7380 44.8020 1.8830 C 0 0 0 0 0
41
+ 27.9061 50.3061 -2.9979 H 0 0 0 0 0
42
+ 29.5925 49.4385 -1.3688 H 0 0 0 0 0
43
+ 26.7188 49.9488 1.8426 H 0 0 0 0 0
44
+ 28.3507 47.1095 2.7989 H 0 0 0 0 0
45
+ 20.2915 55.0069 -7.6067 H 0 0 0 0 0
46
+ 23.2965 51.6007 -4.2370 H 0 0 0 0 0
47
+ 20.8008 56.0741 -5.4042 H 0 0 0 0 0
48
+ 25.0329 50.7933 0.2102 H 0 0 0 0 0
49
+ 25.6859 52.9308 -4.8315 H 0 0 0 0 0
50
+ 24.7872 51.5631 -5.6781 H 0 0 0 0 0
51
+ 23.8412 53.6426 -2.3656 H 0 0 0 0 0
52
+ 22.3596 52.6078 -2.5677 H 0 0 0 0 0
53
+ 24.2319 51.9488 -0.9190 H 0 0 0 0 0
54
+ 23.4764 50.6969 -2.0540 H 0 0 0 0 0
55
+ 25.3406 50.0791 -4.1409 H 0 0 0 0 0
56
+ 26.7864 51.2228 -3.9754 H 0 0 0 0 0
57
+ 22.3816 54.9395 -3.8200 H 0 0 0 0 0
58
+ 22.8998 51.6894 -6.6534 H 0 0 0 0 0
59
+ 21.3159 52.8156 -8.2393 H 0 0 0 0 0
60
+ 30.8265 47.3661 1.1319 H 0 0 0 0 0
61
+ 29.0699 44.8292 3.1829 H 0 0 0 0 0
62
+ 30.3832 46.0175 3.5770 H 0 0 0 0 0
63
+ 26.6562 45.8530 2.1401 H 0 0 0 0 0
64
+ 30.5006 40.6107 -1.3904 H 0 0 0 0 0
65
+ 32.5272 42.0531 -1.1768 H 0 0 0 0 0
66
+ 28.4229 42.9974 1.5654 H 0 0 0 0 0
67
+ 28.4659 41.0587 -0.0212 H 0 0 0 0 0
68
+ 32.5790 46.0249 1.9946 H 0 0 0 0 0
69
+ 1 19 1 0 0 0
70
+ 1 18 1 0 0 0
71
+ 1 13 1 0 0 0
72
+ 13 14 4 0 0 0
73
+ 13 2 4 0 0 0
74
+ 2 3 4 0 0 0
75
+ 3 4 4 0 0 0
76
+ 4 15 1 0 0 0
77
+ 4 5 4 0 0 0
78
+ 5 14 4 0 0 0
79
+ 15 11 2 0 0 0
80
+ 15 12 2 0 0 0
81
+ 15 24 1 0 0 0
82
+ 24 7 1 0 0 0
83
+ 7 25 1 0 0 0
84
+ 7 26 1 0 0 0
85
+ 26 28 2 0 0 0
86
+ 26 27 1 0 0 0
87
+ 25 36 1 0 0 0
88
+ 36 35 4 0 0 0
89
+ 36 32 4 0 0 0
90
+ 32 33 4 0 0 0
91
+ 32 31 4 0 0 0
92
+ 31 6 4 0 0 0
93
+ 31 30 4 0 0 0
94
+ 30 29 4 0 0 0
95
+ 29 34 4 0 0 0
96
+ 34 33 4 0 0 0
97
+ 6 35 4 0 0 0
98
+ 18 17 1 0 0 0
99
+ 17 9 1 0 0 0
100
+ 9 16 1 0 0 0
101
+ 9 21 1 0 0 0
102
+ 21 22 4 0 0 0
103
+ 21 20 4 0 0 0
104
+ 20 10 4 0 0 0
105
+ 10 8 4 0 0 0
106
+ 8 23 4 0 0 0
107
+ 23 22 4 0 0 0
108
+ 16 19 1 0 0 0
109
+ 2 37 1 0 0 0
110
+ 3 38 1 0 0 0
111
+ 5 39 1 0 0 0
112
+ 7 40 1 0 0 0
113
+ 8 41 1 0 0 0
114
+ 9 42 1 0 0 0
115
+ 10 43 1 0 0 0
116
+ 14 44 1 0 0 0
117
+ 16 45 1 0 0 0
118
+ 16 46 1 0 0 0
119
+ 17 47 1 0 0 0
120
+ 17 48 1 0 0 0
121
+ 18 49 1 0 0 0
122
+ 18 50 1 0 0 0
123
+ 19 51 1 0 0 0
124
+ 19 52 1 0 0 0
125
+ 20 53 1 0 0 0
126
+ 22 54 1 0 0 0
127
+ 23 55 1 0 0 0
128
+ 24 56 1 0 0 0
129
+ 25 57 1 0 0 0
130
+ 25 58 1 0 0 0
131
+ 27 59 1 0 0 0
132
+ 29 60 1 0 0 0
133
+ 30 61 1 0 0 0
134
+ 33 62 1 0 0 0
135
+ 34 63 1 0 0 0
136
+ 35 64 1 0 0 0
137
+ M END
138
+ $$$$
1ciz/1ciz_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1ciz/1ciz_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1eoc/1eoc_ligand.mol2 ADDED
@@ -0,0 +1,48 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:47 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1eoc_ligand
7
+ 16 16 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 C1 9.9140 -13.0470 41.2840 C.ar 1 4NC 0.3714
14
+ 2 C2 9.6060 -14.1390 40.5030 C.ar 1 4NC 0.3742
15
+ 3 C3 10.5980 -14.9680 40.0260 C.ar 1 4NC 0.1651
16
+ 4 C4 11.9150 -14.6950 40.3430 C.ar 1 4NC 0.2114
17
+ 5 C5 12.2350 -13.6020 41.1310 C.ar 1 4NC 0.0958
18
+ 6 C6 11.2300 -12.7810 41.5960 C.ar 1 4NC 0.1385
19
+ 7 O7 8.8990 -12.2270 41.7550 O.3 1 4NC -0.1808
20
+ 8 O8 8.2720 -14.3830 40.2150 O.3 1 4NC -0.1831
21
+ 9 N9 12.9680 -15.5560 39.8370 N.2 1 4NC -0.1414
22
+ 10 O10 12.7050 -16.5400 39.1140 O.2 1 4NC -0.4541
23
+ 11 O11 14.1730 -15.3430 40.0940 O.2 1 4NC -0.4541
24
+ 12 H1 10.3483 -15.8240 39.4095 H 1 4NC 0.1053
25
+ 13 H2 13.2691 -13.3934 41.3805 H 1 4NC 0.1507
26
+ 14 H3 11.4758 -11.9221 42.2100 H 1 4NC 0.0996
27
+ 15 H4 8.0615 -12.5532 41.4475 H 1 4NC 0.3517
28
+ 16 H5 7.7938 -14.5173 41.0248 H 1 4NC 0.3499
29
+ @<TRIPOS>BOND
30
+ 1 1 7 1
31
+ 2 1 6 ar
32
+ 3 1 2 ar
33
+ 4 2 8 1
34
+ 5 2 3 ar
35
+ 6 3 4 ar
36
+ 7 4 9 1
37
+ 8 4 5 ar
38
+ 9 5 6 ar
39
+ 10 9 11 2
40
+ 11 9 10 2
41
+ 12 3 12 1
42
+ 13 5 13 1
43
+ 14 6 14 1
44
+ 15 7 15 1
45
+ 16 8 16 1
46
+ @<TRIPOS>SUBSTRUCTURE
47
+ 1 4NC 1
48
+
1eoc/1eoc_ligand.sdf ADDED
@@ -0,0 +1,38 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1eoc_ligand
2
+ -I-interpret-
3
+
4
+ 16 16 0 0 0 0 0 0 0 0999 V2000
5
+ 9.9140 -13.0470 41.2840 C 0 0 0 0 0
6
+ 9.6060 -14.1390 40.5030 C 0 0 0 0 0
7
+ 10.5980 -14.9680 40.0260 C 0 0 0 0 0
8
+ 11.9150 -14.6950 40.3430 C 0 0 0 0 0
9
+ 12.2350 -13.6020 41.1310 C 0 0 0 0 0
10
+ 11.2300 -12.7810 41.5960 C 0 0 0 0 0
11
+ 8.8990 -12.2270 41.7550 O 0 0 0 0 0
12
+ 8.2720 -14.3830 40.2150 O 0 0 0 0 0
13
+ 12.9680 -15.5560 39.8370 N 0 0 0 0 0
14
+ 12.7050 -16.5400 39.1140 O 0 0 0 0 0
15
+ 14.1730 -15.3430 40.0940 O 0 0 0 0 0
16
+ 10.3469 -15.8287 39.4061 H 0 0 0 0 0
17
+ 13.2748 -13.3923 41.3819 H 0 0 0 0 0
18
+ 11.4772 -11.9174 42.2134 H 0 0 0 0 0
19
+ 8.0526 -12.5567 41.4442 H 0 0 0 0 0
20
+ 8.2025 -15.1682 39.6671 H 0 0 0 0 0
21
+ 1 7 1 0 0 0
22
+ 1 6 4 0 0 0
23
+ 1 2 4 0 0 0
24
+ 2 8 1 0 0 0
25
+ 2 3 4 0 0 0
26
+ 3 4 4 0 0 0
27
+ 4 9 1 0 0 0
28
+ 4 5 4 0 0 0
29
+ 5 6 4 0 0 0
30
+ 9 11 2 0 0 0
31
+ 9 10 2 0 0 0
32
+ 3 12 1 0 0 0
33
+ 5 13 1 0 0 0
34
+ 6 14 1 0 0 0
35
+ 7 15 1 0 0 0
36
+ 8 16 1 0 0 0
37
+ M END
38
+ $$$$
1eoc/1eoc_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1eoc/1eoc_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1f4y/1f4y_ligand.mol2 ADDED
@@ -0,0 +1,171 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:47 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1f4y_ligand
7
+ 77 78 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 C1 39.3180 34.9420 -6.4200 C.3 1 MGU 0.1887
14
+ 2 C2 38.7270 33.5480 -6.6370 C.3 1 MGU 0.1369
15
+ 3 O2 37.5110 33.3580 -5.9690 O.3 1 MGU -0.3721
16
+ 4 C8 36.4450 32.7640 -6.6590 C.3 1 MGU 0.0371
17
+ 5 C3 38.7160 33.3610 -8.1610 C.3 1 MGU 0.1112
18
+ 6 O3 38.4540 31.9860 -8.5400 O.3 1 MGU -0.3867
19
+ 7 C4 37.7670 34.3810 -8.7660 C.3 1 MGU 0.0964
20
+ 8 N4 37.6350 34.2850 -10.2700 N.am 1 MGU -0.2767
21
+ 9 C9 36.3310 34.4370 -10.6040 C.2 1 MGU 0.2054
22
+ 10 O9 35.7300 34.5970 -9.5450 O.2 1 MGU -0.3942
23
+ 11 C5 38.1820 35.8250 -8.4210 C.3 1 MGU 0.0843
24
+ 12 O5 38.7900 36.0420 -7.1270 O.3 1 MGU -0.3433
25
+ 13 C6 36.9910 36.8020 -8.5370 C.3 1 MGU -0.0363
26
+ 14 C12 36.0800 35.4420 -14.1210 C.3 1 MGU 0.0487
27
+ 15 O12 37.4410 35.8630 -14.2980 O.3 1 MGU -0.3948
28
+ 16 C11 35.7620 35.6930 -12.7050 C.3 1 MGU 0.0138
29
+ 17 C10 35.4340 34.4700 -11.8440 C.3 1 MGU 0.1456
30
+ 18 O10 35.2150 33.2860 -12.5640 O.3 1 MGU -0.3713
31
+ 19 C21 41.8150 36.6270 -7.7930 C.3 1 MGU 0.1878
32
+ 20 O1 40.6950 34.7540 -6.7710 O.3 1 MGU -0.3378
33
+ 21 C27 43.9480 36.9350 -6.9700 C.3 1 MGU 0.0395
34
+ 22 C22 41.6340 35.7800 -6.5380 C.3 1 MGU 0.1403
35
+ 23 O21 42.7460 37.6040 -7.3840 O.3 1 MGU -0.3519
36
+ 24 C23 42.9590 35.1650 -6.0840 C.3 1 MGU 0.1113
37
+ 25 O23 42.9170 34.0200 -5.2110 O.3 1 MGU -0.3867
38
+ 26 C24 43.6390 34.5750 -7.3000 C.3 1 MGU 0.0964
39
+ 27 N24 45.0090 34.0580 -6.9980 N.am 1 MGU -0.2767
40
+ 28 C29 45.1350 32.7780 -7.4070 C.2 1 MGU 0.2054
41
+ 29 O29 44.2870 32.3790 -8.2050 O.2 1 MGU -0.3942
42
+ 30 C25 43.7620 35.5740 -8.4530 C.3 1 MGU 0.0843
43
+ 31 O25 42.4200 35.9330 -8.9150 O.3 1 MGU -0.3434
44
+ 32 C26 44.7110 34.9710 -9.4950 C.3 1 MGU -0.0363
45
+ 33 C32 48.4520 31.6250 -5.9460 C.3 1 MGU 0.0487
46
+ 34 O32 48.1920 30.2260 -6.1160 O.3 1 MGU -0.3948
47
+ 35 C31 47.6360 32.4130 -6.9320 C.3 1 MGU 0.0138
48
+ 36 C30 46.2190 31.8340 -6.8830 C.3 1 MGU 0.1456
49
+ 37 O30 45.9550 31.3740 -5.5880 O.3 1 MGU -0.3713
50
+ 38 H1 39.2315 35.1846 -5.3506 H 1 MGU 0.0938
51
+ 39 H2 39.4231 32.8073 -6.2164 H 1 MGU 0.0673
52
+ 40 H3 35.5727 32.6903 -5.9929 H 1 MGU 0.0524
53
+ 41 H4 36.7387 31.7573 -6.9911 H 1 MGU 0.0524
54
+ 42 H5 36.1871 33.3782 -7.5343 H 1 MGU 0.0524
55
+ 43 H6 39.7238 33.5982 -8.5324 H 1 MGU 0.0645
56
+ 44 H7 37.6060 31.7218 -8.2028 H 1 MGU 0.2100
57
+ 45 H8 36.7746 34.1949 -8.3295 H 1 MGU 0.0608
58
+ 46 H9 38.3867 34.1341 -10.9120 H 1 MGU 0.1857
59
+ 47 H10 38.9293 36.1130 -9.1751 H 1 MGU 0.0618
60
+ 48 H11 37.3251 37.8190 -8.2841 H 1 MGU 0.0255
61
+ 49 H12 36.1953 36.4942 -7.8427 H 1 MGU 0.0255
62
+ 50 H13 36.6046 36.7885 -9.5668 H 1 MGU 0.0255
63
+ 51 H14 35.9772 34.3716 -14.3525 H 1 MGU 0.0559
64
+ 52 H15 35.4114 36.0239 -14.7724 H 1 MGU 0.0559
65
+ 53 H16 37.7000 35.7221 -15.2011 H 1 MGU 0.2094
66
+ 54 H17 34.8919 36.3652 -12.6734 H 1 MGU 0.0337
67
+ 55 H18 36.6300 36.1951 -12.2529 H 1 MGU 0.0337
68
+ 56 H19 34.4375 34.6872 -11.4321 H 1 MGU 0.0838
69
+ 57 H20 35.0189 32.5804 -11.9589 H 1 MGU 0.2133
70
+ 58 H21 40.8556 37.0685 -8.1007 H 1 MGU 0.0937
71
+ 59 H22 44.6895 37.6803 -6.6462 H 1 MGU 0.0525
72
+ 60 H23 44.3541 36.3559 -7.8124 H 1 MGU 0.0525
73
+ 61 H24 43.7209 36.2567 -6.1343 H 1 MGU 0.0525
74
+ 62 H25 41.2563 36.4286 -5.7339 H 1 MGU 0.0675
75
+ 63 H26 43.5660 35.9576 -5.6221 H 1 MGU 0.0645
76
+ 64 H27 42.4532 33.3116 -5.6417 H 1 MGU 0.2100
77
+ 65 H28 43.0210 33.7316 -7.6415 H 1 MGU 0.0608
78
+ 66 H29 45.7321 34.5874 -6.5543 H 1 MGU 0.1857
79
+ 67 H30 44.2315 36.4951 -8.0773 H 1 MGU 0.0618
80
+ 68 H31 44.8198 35.6683 -10.3388 H 1 MGU 0.0255
81
+ 69 H32 44.2992 34.0177 -9.8579 H 1 MGU 0.0255
82
+ 70 H33 45.6950 34.7944 -9.0361 H 1 MGU 0.0255
83
+ 71 H34 49.5209 31.8219 -6.1153 H 1 MGU 0.0559
84
+ 72 H35 48.1811 31.9261 -4.9233 H 1 MGU 0.0559
85
+ 73 H36 47.2688 30.0565 -5.9694 H 1 MGU 0.2094
86
+ 74 H37 48.0553 32.3069 -7.9434 H 1 MGU 0.0337
87
+ 75 H38 47.6222 33.4763 -6.6504 H 1 MGU 0.0337
88
+ 76 H39 46.2093 30.9574 -7.5474 H 1 MGU 0.0838
89
+ 77 H40 46.5838 30.6999 -5.3583 H 1 MGU 0.2133
90
+ @<TRIPOS>BOND
91
+ 1 1 2 1
92
+ 2 1 12 1
93
+ 3 20 1 1
94
+ 4 2 3 1
95
+ 5 2 5 1
96
+ 6 3 4 1
97
+ 7 5 6 1
98
+ 8 5 7 1
99
+ 9 7 8 1
100
+ 10 11 7 1
101
+ 11 8 9 am
102
+ 12 9 10 2
103
+ 13 9 17 1
104
+ 14 12 11 1
105
+ 15 11 13 1
106
+ 16 14 15 1
107
+ 17 16 14 1
108
+ 18 17 16 1
109
+ 19 17 18 1
110
+ 20 22 19 1
111
+ 21 19 23 1
112
+ 22 31 19 1
113
+ 23 22 20 1
114
+ 24 23 21 1
115
+ 25 24 22 1
116
+ 26 24 25 1
117
+ 27 26 24 1
118
+ 28 27 26 1
119
+ 29 26 30 1
120
+ 30 28 27 am
121
+ 31 28 29 2
122
+ 32 36 28 1
123
+ 33 30 31 1
124
+ 34 30 32 1
125
+ 35 33 34 1
126
+ 36 35 33 1
127
+ 37 35 36 1
128
+ 38 36 37 1
129
+ 39 1 38 1
130
+ 40 2 39 1
131
+ 41 4 40 1
132
+ 42 4 41 1
133
+ 43 4 42 1
134
+ 44 5 43 1
135
+ 45 6 44 1
136
+ 46 7 45 1
137
+ 47 8 46 1
138
+ 48 11 47 1
139
+ 49 13 48 1
140
+ 50 13 49 1
141
+ 51 13 50 1
142
+ 52 14 51 1
143
+ 53 14 52 1
144
+ 54 15 53 1
145
+ 55 16 54 1
146
+ 56 16 55 1
147
+ 57 17 56 1
148
+ 58 18 57 1
149
+ 59 19 58 1
150
+ 60 21 59 1
151
+ 61 21 60 1
152
+ 62 21 61 1
153
+ 63 22 62 1
154
+ 64 24 63 1
155
+ 65 25 64 1
156
+ 66 26 65 1
157
+ 67 27 66 1
158
+ 68 30 67 1
159
+ 69 32 68 1
160
+ 70 32 69 1
161
+ 71 32 70 1
162
+ 72 33 71 1
163
+ 73 33 72 1
164
+ 74 34 73 1
165
+ 75 35 74 1
166
+ 76 35 75 1
167
+ 77 36 76 1
168
+ 78 37 77 1
169
+ @<TRIPOS>SUBSTRUCTURE
170
+ 1 MGU 1
171
+
1f4y/1f4y_ligand.sdf ADDED
@@ -0,0 +1,161 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1f4y_ligand
2
+ -I-interpret-
3
+
4
+ 77 78 0 0 0 0 0 0 0 0999 V2000
5
+ 39.3180 34.9420 -6.4200 C 0 0 0 0 0
6
+ 38.7270 33.5480 -6.6370 C 0 0 0 0 0
7
+ 37.5110 33.3580 -5.9690 O 0 0 0 0 0
8
+ 36.4450 32.7640 -6.6590 C 0 0 0 0 0
9
+ 38.7160 33.3610 -8.1610 C 0 0 0 0 0
10
+ 38.4540 31.9860 -8.5400 O 0 0 0 0 0
11
+ 37.7670 34.3810 -8.7660 C 0 0 0 0 0
12
+ 37.6350 34.2850 -10.2700 N 0 0 0 0 0
13
+ 36.3310 34.4370 -10.6040 C 0 0 0 0 0
14
+ 35.7300 34.5970 -9.5450 O 0 0 0 0 0
15
+ 38.1820 35.8250 -8.4210 C 0 0 0 0 0
16
+ 38.7900 36.0420 -7.1270 O 0 0 0 0 0
17
+ 36.9910 36.8020 -8.5370 C 0 0 0 0 0
18
+ 36.0800 35.4420 -14.1210 C 0 0 0 0 0
19
+ 37.4410 35.8630 -14.2980 O 0 0 0 0 0
20
+ 35.7620 35.6930 -12.7050 C 0 0 0 0 0
21
+ 35.4340 34.4700 -11.8440 C 0 0 0 0 0
22
+ 35.2150 33.2860 -12.5640 O 0 0 0 0 0
23
+ 41.8150 36.6270 -7.7930 C 0 0 0 0 0
24
+ 40.6950 34.7540 -6.7710 O 0 0 0 0 0
25
+ 43.9480 36.9350 -6.9700 C 0 0 0 0 0
26
+ 41.6340 35.7800 -6.5380 C 0 0 0 0 0
27
+ 42.7460 37.6040 -7.3840 O 0 0 0 0 0
28
+ 42.9590 35.1650 -6.0840 C 0 0 0 0 0
29
+ 42.9170 34.0200 -5.2110 O 0 0 0 0 0
30
+ 43.6390 34.5750 -7.3000 C 0 0 0 0 0
31
+ 45.0090 34.0580 -6.9980 N 0 0 0 0 0
32
+ 45.1350 32.7780 -7.4070 C 0 0 0 0 0
33
+ 44.2870 32.3790 -8.2050 O 0 0 0 0 0
34
+ 43.7620 35.5740 -8.4530 C 0 0 0 0 0
35
+ 42.4200 35.9330 -8.9150 O 0 0 0 0 0
36
+ 44.7110 34.9710 -9.4950 C 0 0 0 0 0
37
+ 48.4520 31.6250 -5.9460 C 0 0 0 0 0
38
+ 48.1920 30.2260 -6.1160 O 0 0 0 0 0
39
+ 47.6360 32.4130 -6.9320 C 0 0 0 0 0
40
+ 46.2190 31.8340 -6.8830 C 0 0 0 0 0
41
+ 45.9550 31.3740 -5.5880 O 0 0 0 0 0
42
+ 39.0881 35.2440 -5.3982 H 0 0 0 0 0
43
+ 39.3207 32.7543 -6.1835 H 0 0 0 0 0
44
+ 36.1904 33.3735 -7.5260 H 0 0 0 0 0
45
+ 36.7373 31.7667 -6.9876 H 0 0 0 0 0
46
+ 35.5813 32.6916 -5.9980 H 0 0 0 0 0
47
+ 39.7063 33.5531 -8.5739 H 0 0 0 0 0
48
+ 39.0954 31.4108 -8.1165 H 0 0 0 0 0
49
+ 36.8018 34.1397 -8.3209 H 0 0 0 0 0
50
+ 38.4017 34.1311 -10.9248 H 0 0 0 0 0
51
+ 38.9553 36.0174 -9.1646 H 0 0 0 0 0
52
+ 36.2771 36.5989 -7.7388 H 0 0 0 0 0
53
+ 37.3533 37.8264 -8.4503 H 0 0 0 0 0
54
+ 36.5053 36.6676 -9.5035 H 0 0 0 0 0
55
+ 35.9549 34.3893 -14.3745 H 0 0 0 0 0
56
+ 35.4071 35.9893 -14.7811 H 0 0 0 0 0
57
+ 37.7027 35.7207 -15.2106 H 0 0 0 0 0
58
+ 34.8628 36.3091 -12.7048 H 0 0 0 0 0
59
+ 36.6593 36.1333 -12.2702 H 0 0 0 0 0
60
+ 34.4308 34.5740 -11.4305 H 0 0 0 0 0
61
+ 34.6362 33.4677 -13.3080 H 0 0 0 0 0
62
+ 40.8410 36.9734 -8.1386 H 0 0 0 0 0
63
+ 43.7216 36.2632 -6.1420 H 0 0 0 0 0
64
+ 44.3493 36.3615 -7.8056 H 0 0 0 0 0
65
+ 44.6819 37.6744 -6.6494 H 0 0 0 0 0
66
+ 41.2694 36.4362 -5.7477 H 0 0 0 0 0
67
+ 43.4320 35.9953 -5.5596 H 0 0 0 0 0
68
+ 43.8128 33.7407 -5.0081 H 0 0 0 0 0
69
+ 42.9916 33.7505 -7.5986 H 0 0 0 0 0
70
+ 45.7465 34.5980 -6.5454 H 0 0 0 0 0
71
+ 44.2108 36.5249 -8.1657 H 0 0 0 0 0
72
+ 45.6855 34.7964 -9.0391 H 0 0 0 0 0
73
+ 44.3018 34.0265 -9.8537 H 0 0 0 0 0
74
+ 44.8180 35.6628 -10.3305 H 0 0 0 0 0
75
+ 49.5111 31.8197 -6.1149 H 0 0 0 0 0
76
+ 48.1824 31.9229 -4.9328 H 0 0 0 0 0
77
+ 48.7145 29.7256 -5.4850 H 0 0 0 0 0
78
+ 48.0549 32.3364 -7.9354 H 0 0 0 0 0
79
+ 47.6339 33.4731 -6.6785 H 0 0 0 0 0
80
+ 46.1836 30.9944 -7.5772 H 0 0 0 0 0
81
+ 46.6618 30.7881 -5.3074 H 0 0 0 0 0
82
+ 1 2 1 0 0 0
83
+ 1 12 1 0 0 0
84
+ 20 1 1 0 0 0
85
+ 2 3 1 0 0 0
86
+ 2 5 1 0 0 0
87
+ 3 4 1 0 0 0
88
+ 5 6 1 0 0 0
89
+ 5 7 1 0 0 0
90
+ 7 8 1 0 0 0
91
+ 11 7 1 0 0 0
92
+ 8 9 1 0 0 0
93
+ 9 10 2 0 0 0
94
+ 9 17 1 0 0 0
95
+ 12 11 1 0 0 0
96
+ 11 13 1 0 0 0
97
+ 14 15 1 0 0 0
98
+ 16 14 1 0 0 0
99
+ 17 16 1 0 0 0
100
+ 17 18 1 0 0 0
101
+ 22 19 1 0 0 0
102
+ 19 23 1 0 0 0
103
+ 31 19 1 0 0 0
104
+ 22 20 1 0 0 0
105
+ 23 21 1 0 0 0
106
+ 24 22 1 0 0 0
107
+ 24 25 1 0 0 0
108
+ 26 24 1 0 0 0
109
+ 27 26 1 0 0 0
110
+ 26 30 1 0 0 0
111
+ 28 27 1 0 0 0
112
+ 28 29 2 0 0 0
113
+ 36 28 1 0 0 0
114
+ 30 31 1 0 0 0
115
+ 30 32 1 0 0 0
116
+ 33 34 1 0 0 0
117
+ 35 33 1 0 0 0
118
+ 35 36 1 0 0 0
119
+ 36 37 1 0 0 0
120
+ 1 38 1 0 0 0
121
+ 2 39 1 0 0 0
122
+ 4 40 1 0 0 0
123
+ 4 41 1 0 0 0
124
+ 4 42 1 0 0 0
125
+ 5 43 1 0 0 0
126
+ 6 44 1 0 0 0
127
+ 7 45 1 0 0 0
128
+ 8 46 1 0 0 0
129
+ 11 47 1 0 0 0
130
+ 13 48 1 0 0 0
131
+ 13 49 1 0 0 0
132
+ 13 50 1 0 0 0
133
+ 14 51 1 0 0 0
134
+ 14 52 1 0 0 0
135
+ 15 53 1 0 0 0
136
+ 16 54 1 0 0 0
137
+ 16 55 1 0 0 0
138
+ 17 56 1 0 0 0
139
+ 18 57 1 0 0 0
140
+ 19 58 1 0 0 0
141
+ 21 59 1 0 0 0
142
+ 21 60 1 0 0 0
143
+ 21 61 1 0 0 0
144
+ 22 62 1 0 0 0
145
+ 24 63 1 0 0 0
146
+ 25 64 1 0 0 0
147
+ 26 65 1 0 0 0
148
+ 27 66 1 0 0 0
149
+ 30 67 1 0 0 0
150
+ 32 68 1 0 0 0
151
+ 32 69 1 0 0 0
152
+ 32 70 1 0 0 0
153
+ 33 71 1 0 0 0
154
+ 33 72 1 0 0 0
155
+ 34 73 1 0 0 0
156
+ 35 74 1 0 0 0
157
+ 35 75 1 0 0 0
158
+ 36 76 1 0 0 0
159
+ 37 77 1 0 0 0
160
+ M END
161
+ $$$$
1f4y/1f4y_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1f4y/1f4y_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1fh9/1fh9_ligand.mol2 ADDED
@@ -0,0 +1,93 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:47 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1fh9_ligand
7
+ 38 39 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 C1 17.0240 65.6540 38.7720 C.3 1 XYP 0.1880
14
+ 2 C2 16.7500 64.6450 39.8890 C.3 1 XYP 0.1341
15
+ 3 C3 15.2930 64.1800 39.8510 C.3 1 XYP 0.1137
16
+ 4 C4 14.3450 65.3820 39.8410 C.3 1 XYP 0.1069
17
+ 5 C5 14.7300 66.3480 38.7160 C.3 1 XYP 0.0792
18
+ 6 O2 17.6140 63.5280 39.7340 O.3 1 XYP -0.3841
19
+ 7 O3 15.0250 63.3770 40.9910 O.3 1 XYP -0.3864
20
+ 8 O4 13.0080 64.9330 39.6550 O.3 1 XYP -0.3869
21
+ 9 O5 16.1090 66.7560 38.8640 O.3 1 XYP -0.3461
22
+ 10 C1 20.2840 68.0920 35.6370 C.2 1 LOX 0.1319
23
+ 11 C2 20.1080 68.9450 36.9630 C.3 1 LOX 0.1503
24
+ 12 C3 19.7760 67.9940 38.1890 C.3 1 LOX 0.1233
25
+ 13 C4 18.7680 66.9010 37.7820 C.3 1 LOX 0.1119
26
+ 14 C5 19.4320 65.9060 36.7850 C.3 1 LOX 0.0561
27
+ 15 N1 19.9320 66.7240 35.6370 N.pl3 1 LOX -0.3043
28
+ 16 O22 20.8960 67.6930 33.5380 O.3 1 LOX -0.3046
29
+ 17 N2 20.7740 68.6060 34.5160 N.2 1 LOX -0.2068
30
+ 18 O2 21.2120 69.7450 37.2520 O.3 1 LOX -0.3713
31
+ 19 O3 19.2280 68.7490 39.2790 O.3 1 LOX -0.3841
32
+ 20 O4 18.3660 66.1610 38.9280 O.3 1 LOX -0.3406
33
+ 21 H1 16.9173 65.1627 37.7936 H 1 XYP 0.0937
34
+ 22 H2 16.9468 65.1228 40.8600 H 1 XYP 0.0671
35
+ 23 H3 15.1289 63.5853 38.9403 H 1 XYP 0.0647
36
+ 24 H4 14.4188 65.9064 40.8051 H 1 XYP 0.0643
37
+ 25 H5 14.0811 67.2351 38.7598 H 1 XYP 0.0587
38
+ 26 H6 14.6008 65.8467 37.7454 H 1 XYP 0.0587
39
+ 27 H7 17.4454 62.9001 40.4268 H 1 XYP 0.2101
40
+ 28 H8 14.1203 63.0880 40.9678 H 1 XYP 0.2100
41
+ 29 H9 12.9424 64.4714 38.8272 H 1 XYP 0.2100
42
+ 30 H10 19.2485 69.6145 36.8114 H 1 XYP 0.0843
43
+ 31 H11 20.7079 67.5128 38.5207 H 1 XYP 0.0673
44
+ 32 H12 17.8904 67.3697 37.3128 H 1 XYP 0.0646
45
+ 33 H13 18.6934 65.1703 36.4339 H 1 XYP 0.0544
46
+ 34 H14 20.2684 65.3825 37.2711 H 1 XYP 0.0544
47
+ 35 H15 20.0316 66.2305 34.7384 H 1 XYP 0.1808
48
+ 36 H16 20.0425 67.3249 33.3417 H 1 XYP 0.2523
49
+ 37 H17 21.9792 69.1958 37.3632 H 1 XYP 0.2137
50
+ 38 H18 19.8579 69.4033 39.5578 H 1 XYP 0.2103
51
+ @<TRIPOS>BOND
52
+ 1 1 9 1
53
+ 2 1 2 1
54
+ 3 2 6 1
55
+ 4 2 3 1
56
+ 5 3 7 1
57
+ 6 3 4 1
58
+ 7 4 8 1
59
+ 8 5 4 1
60
+ 9 9 5 1
61
+ 10 10 17 2
62
+ 11 15 10 1
63
+ 12 11 10 1
64
+ 13 11 18 1
65
+ 14 12 11 1
66
+ 15 12 19 1
67
+ 16 13 12 1
68
+ 17 20 13 1
69
+ 18 13 14 1
70
+ 19 14 15 1
71
+ 20 17 16 1
72
+ 21 20 1 1
73
+ 22 1 21 1
74
+ 23 2 22 1
75
+ 24 3 23 1
76
+ 25 4 24 1
77
+ 26 5 25 1
78
+ 27 5 26 1
79
+ 28 6 27 1
80
+ 29 7 28 1
81
+ 30 8 29 1
82
+ 31 11 30 1
83
+ 32 12 31 1
84
+ 33 13 32 1
85
+ 34 14 33 1
86
+ 35 14 34 1
87
+ 36 15 35 1
88
+ 37 16 36 1
89
+ 38 18 37 1
90
+ 39 19 38 1
91
+ @<TRIPOS>SUBSTRUCTURE
92
+ 1 XYP 1
93
+
1fh9/1fh9_ligand.sdf ADDED
@@ -0,0 +1,83 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1fh9_ligand
2
+ -I-interpret-
3
+
4
+ 38 39 0 0 0 0 0 0 0 0999 V2000
5
+ 17.0240 65.6540 38.7720 C 0 0 0 0 0
6
+ 16.7500 64.6450 39.8890 C 0 0 0 0 0
7
+ 15.2930 64.1800 39.8510 C 0 0 0 0 0
8
+ 14.3450 65.3820 39.8410 C 0 0 0 0 0
9
+ 14.7300 66.3480 38.7160 C 0 0 0 0 0
10
+ 17.6140 63.5280 39.7340 O 0 0 0 0 0
11
+ 15.0250 63.3770 40.9910 O 0 0 0 0 0
12
+ 13.0080 64.9330 39.6550 O 0 0 0 0 0
13
+ 16.1090 66.7560 38.8640 O 0 0 0 0 0
14
+ 20.2840 68.0920 35.6370 C 0 0 0 0 0
15
+ 20.1080 68.9450 36.9630 C 0 0 0 0 0
16
+ 19.7760 67.9940 38.1890 C 0 0 0 0 0
17
+ 18.7680 66.9010 37.7820 C 0 0 0 0 0
18
+ 19.4320 65.9060 36.7850 C 0 0 0 0 0
19
+ 19.9320 66.7240 35.6370 N 0 0 0 0 0
20
+ 20.8960 67.6930 33.5380 O 0 0 0 0 0
21
+ 20.7740 68.6060 34.5160 N 0 0 0 0 0
22
+ 21.2120 69.7450 37.2520 O 0 0 0 0 0
23
+ 19.2280 68.7490 39.2790 O 0 0 0 0 0
24
+ 18.3660 66.1610 38.9280 O 0 0 0 0 0
25
+ 16.9027 65.1623 37.8068 H 0 0 0 0 0
26
+ 16.9337 65.1243 40.8505 H 0 0 0 0 0
27
+ 15.1332 63.6003 38.9419 H 0 0 0 0 0
28
+ 14.4219 65.9043 40.7946 H 0 0 0 0 0
29
+ 14.0888 67.2281 38.7643 H 0 0 0 0 0
30
+ 14.6054 65.8476 37.7557 H 0 0 0 0 0
31
+ 18.5266 63.8249 39.7585 H 0 0 0 0 0
32
+ 15.6196 62.6233 40.9971 H 0 0 0 0 0
33
+ 12.7733 64.3285 40.3628 H 0 0 0 0 0
34
+ 19.2724 69.6230 36.7893 H 0 0 0 0 0
35
+ 20.7085 67.5241 38.5014 H 0 0 0 0 0
36
+ 17.9086 67.3861 37.3191 H 0 0 0 0 0
37
+ 18.7163 65.1565 36.4473 H 0 0 0 0 0
38
+ 20.2481 65.3629 37.2615 H 0 0 0 0 0
39
+ 20.0307 66.2353 34.7472 H 0 0 0 0 0
40
+ 21.2530 68.1133 32.7522 H 0 0 0 0 0
41
+ 21.0477 70.2349 38.0611 H 0 0 0 0 0
42
+ 19.0337 68.1582 40.0103 H 0 0 0 0 0
43
+ 1 9 1 0 0 0
44
+ 1 2 1 0 0 0
45
+ 2 6 1 0 0 0
46
+ 2 3 1 0 0 0
47
+ 3 7 1 0 0 0
48
+ 3 4 1 0 0 0
49
+ 4 8 1 0 0 0
50
+ 5 4 1 0 0 0
51
+ 9 5 1 0 0 0
52
+ 10 17 2 0 0 0
53
+ 15 10 1 0 0 0
54
+ 11 10 1 0 0 0
55
+ 11 18 1 0 0 0
56
+ 12 11 1 0 0 0
57
+ 12 19 1 0 0 0
58
+ 13 12 1 0 0 0
59
+ 20 13 1 0 0 0
60
+ 13 14 1 0 0 0
61
+ 14 15 1 0 0 0
62
+ 17 16 1 0 0 0
63
+ 20 1 1 0 0 0
64
+ 1 21 1 0 0 0
65
+ 2 22 1 0 0 0
66
+ 3 23 1 0 0 0
67
+ 4 24 1 0 0 0
68
+ 5 25 1 0 0 0
69
+ 5 26 1 0 0 0
70
+ 6 27 1 0 0 0
71
+ 7 28 1 0 0 0
72
+ 8 29 1 0 0 0
73
+ 11 30 1 0 0 0
74
+ 12 31 1 0 0 0
75
+ 13 32 1 0 0 0
76
+ 14 33 1 0 0 0
77
+ 14 34 1 0 0 0
78
+ 15 35 1 0 0 0
79
+ 16 36 1 0 0 0
80
+ 18 37 1 0 0 0
81
+ 19 38 1 0 0 0
82
+ M END
83
+ $$$$
1fh9/1fh9_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1fh9/1fh9_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1inf/1inf_ligand.mol2 ADDED
@@ -0,0 +1,74 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:45 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1inf_ligand
7
+ 29 29 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 C' 33.1050 -12.4580 65.9980 C.2 1 ST4 0.0819
14
+ 2 O1' 34.0300 -12.5250 66.8260 O.co2 1 ST4 -0.5534
15
+ 3 O2' 32.3620 -13.4370 65.7300 O.co2 1 ST4 -0.5534
16
+ 4 C1 32.8880 -11.2680 65.3080 C.ar 1 ST4 0.0406
17
+ 5 C2 31.6060 -10.9310 64.8860 C.ar 1 ST4 0.0274
18
+ 6 C3 31.3880 -9.8400 64.0720 C.ar 1 ST4 0.1754
19
+ 7 N3 30.1070 -9.5670 63.6370 N.pl3 1 ST4 -0.2609
20
+ 8 C3' 29.3990 -10.4570 62.9490 C.cat 1 ST4 0.1480
21
+ 9 N1 28.1950 -10.1450 62.4930 N.pl3 1 ST4 -0.3533
22
+ 10 N2 29.9080 -11.6440 62.6720 N.pl3 1 ST4 -0.3533
23
+ 11 C4 32.4760 -9.0450 63.6690 C.ar 1 ST4 0.2179
24
+ 12 N4 32.2970 -7.9780 62.7840 N.am 1 ST4 -0.1620
25
+ 13 C4' 31.4600 -6.9730 63.0050 C.2 1 ST4 0.2665
26
+ 14 O4 30.8700 -6.8440 64.0770 O.2 1 ST4 -0.3431
27
+ 15 CM4 31.3110 -5.8990 61.9640 C.3 1 ST4 0.0480
28
+ 16 C5 33.7490 -9.3650 64.1120 C.ar 1 ST4 0.0289
29
+ 17 C6 33.9470 -10.4570 64.9240 C.ar 1 ST4 -0.0164
30
+ 18 H1 30.7644 -11.5364 65.2025 H 1 ST4 0.0688
31
+ 19 H2 29.6890 -8.6503 63.8509 H 1 ST4 0.2213
32
+ 20 H3 27.6504 -10.8383 61.9604 H 1 ST4 0.1652
33
+ 21 H4 27.8034 -9.2091 62.6711 H 1 ST4 0.1652
34
+ 22 H5 30.8432 -11.8975 63.0212 H 1 ST4 0.1652
35
+ 23 H6 29.3697 -12.3160 62.1068 H 1 ST4 0.1652
36
+ 24 H7 32.8293 -7.9720 61.9375 H 1 ST4 0.3111
37
+ 25 H8 30.5822 -5.1514 62.3103 H 1 ST4 0.0488
38
+ 26 H9 30.9582 -6.3466 61.0232 H 1 ST4 0.0488
39
+ 27 H10 32.2835 -5.4130 61.7968 H 1 ST4 0.0488
40
+ 28 H11 34.5929 -8.7518 63.8172 H 1 ST4 0.0750
41
+ 29 H12 34.9478 -10.6885 65.2703 H 1 ST4 0.0777
42
+ @<TRIPOS>BOND
43
+ 1 4 1 1
44
+ 2 1 3 ar
45
+ 3 1 2 ar
46
+ 4 4 17 ar
47
+ 5 4 5 ar
48
+ 6 5 6 ar
49
+ 7 6 11 ar
50
+ 8 6 7 1
51
+ 9 7 8 ar
52
+ 10 8 10 ar
53
+ 11 8 9 ar
54
+ 12 11 16 ar
55
+ 13 11 12 1
56
+ 14 12 13 am
57
+ 15 13 15 1
58
+ 16 13 14 2
59
+ 17 16 17 ar
60
+ 18 5 18 1
61
+ 19 7 19 1
62
+ 20 9 20 1
63
+ 21 9 21 1
64
+ 22 10 22 1
65
+ 23 10 23 1
66
+ 24 12 24 1
67
+ 25 15 25 1
68
+ 26 15 26 1
69
+ 27 15 27 1
70
+ 28 16 28 1
71
+ 29 17 29 1
72
+ @<TRIPOS>SUBSTRUCTURE
73
+ 1 ST4 1
74
+
1inf/1inf_ligand.sdf ADDED
@@ -0,0 +1,64 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1inf_ligand
2
+ -I-interpret-
3
+
4
+ 29 29 0 0 0 0 0 0 0 0999 V2000
5
+ 33.1050 -12.4580 65.9980 C 0 0 0 0 0
6
+ 34.0300 -12.5250 66.8260 O 0 0 0 0 0
7
+ 32.3620 -13.4370 65.7300 O 0 0 0 0 0
8
+ 32.8880 -11.2680 65.3080 C 0 0 0 0 0
9
+ 31.6060 -10.9310 64.8860 C 0 0 0 0 0
10
+ 31.3880 -9.8400 64.0720 C 0 0 0 0 0
11
+ 30.1070 -9.5670 63.6370 N 0 0 0 0 0
12
+ 29.3990 -10.4570 62.9490 C 0 0 0 0 0
13
+ 28.1950 -10.1450 62.4930 N 0 0 0 0 0
14
+ 29.9080 -11.6440 62.6720 N 0 0 0 0 0
15
+ 32.4760 -9.0450 63.6690 C 0 0 0 0 0
16
+ 32.2970 -7.9780 62.7840 N 0 0 0 0 0
17
+ 31.4600 -6.9730 63.0050 C 0 0 0 0 0
18
+ 30.8700 -6.8440 64.0770 O 0 0 0 0 0
19
+ 31.3110 -5.8990 61.9640 C 0 0 0 0 0
20
+ 33.7490 -9.3650 64.1120 C 0 0 0 0 0
21
+ 33.9470 -10.4570 64.9240 C 0 0 0 0 0
22
+ 31.7162 -13.1758 65.0695 H 0 0 0 0 0
23
+ 30.7597 -11.5398 65.2043 H 0 0 0 0 0
24
+ 29.6930 -8.6592 63.8489 H 0 0 0 0 0
25
+ 27.6710 -10.8185 61.9342 H 0 0 0 0 0
26
+ 27.7920 -9.2313 62.7007 H 0 0 0 0 0
27
+ 29.3749 -12.3095 62.1123 H 0 0 0 0 0
28
+ 32.8400 -7.9719 61.9206 H 0 0 0 0 0
29
+ 30.2601 -5.8023 61.6914 H 0 0 0 0 0
30
+ 31.6719 -4.9524 62.3662 H 0 0 0 0 0
31
+ 31.8933 -6.1662 61.0822 H 0 0 0 0 0
32
+ 34.5975 -8.7484 63.8156 H 0 0 0 0 0
33
+ 34.9533 -10.6898 65.2722 H 0 0 0 0 0
34
+ 4 1 1 0 0 0
35
+ 1 3 1 0 0 0
36
+ 1 2 2 0 0 0
37
+ 4 17 4 0 0 0
38
+ 4 5 4 0 0 0
39
+ 5 6 4 0 0 0
40
+ 6 11 4 0 0 0
41
+ 6 7 1 0 0 0
42
+ 7 8 1 0 0 0
43
+ 8 10 2 0 0 0
44
+ 8 9 1 0 0 0
45
+ 11 16 4 0 0 0
46
+ 11 12 1 0 0 0
47
+ 12 13 1 0 0 0
48
+ 13 15 1 0 0 0
49
+ 13 14 2 0 0 0
50
+ 16 17 4 0 0 0
51
+ 3 18 1 0 0 0
52
+ 5 19 1 0 0 0
53
+ 7 20 1 0 0 0
54
+ 9 21 1 0 0 0
55
+ 9 22 1 0 0 0
56
+ 10 23 1 0 0 0
57
+ 12 24 1 0 0 0
58
+ 15 25 1 0 0 0
59
+ 15 26 1 0 0 0
60
+ 15 27 1 0 0 0
61
+ 16 28 1 0 0 0
62
+ 17 29 1 0 0 0
63
+ M END
64
+ $$$$
1inf/1inf_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1inf/1inf_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1k21/1k21_ligand.mol2 ADDED
@@ -0,0 +1,157 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:49 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1k21_ligand
7
+ 70 71 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 C1 16.1560 -11.6220 20.2070 C.2 1 IGN 0.2019
14
+ 2 O2 15.4510 -12.5640 19.8270 O.2 1 IGN -0.3945
15
+ 3 N3 15.6340 -10.3970 20.3990 N.am 1 IGN -0.2849
16
+ 4 C4 14.2220 -10.0260 20.1930 C.3 1 IGN 0.0341
17
+ 5 C5 13.4950 -9.7650 21.5200 C.3 1 IGN 0.0004
18
+ 6 C6 12.0090 -10.0930 21.4210 C.3 1 IGN 0.0644
19
+ 7 N7 11.6090 -11.1220 22.3900 N.pl3 1 IGN -0.2722
20
+ 8 C8 11.0030 -10.8830 23.6710 C.cat 1 IGN 0.2882
21
+ 9 N9 10.6870 -11.9160 24.4420 N.pl3 1 IGN -0.2849
22
+ 10 N10 10.7580 -9.6370 24.0780 N.pl3 1 IGN -0.2849
23
+ 11 N11 17.9500 -13.2540 21.0630 N.am 1 IGN -0.2471
24
+ 12 C12 17.6790 -11.8530 20.4870 C.3 1 IGN 0.1337
25
+ 13 C13 18.4230 -11.6090 19.1400 C.3 1 IGN -0.0121
26
+ 14 C14 19.8990 -12.0490 19.1810 C.3 1 IGN -0.0470
27
+ 15 C15 20.0010 -13.5800 19.4210 C.3 1 IGN -0.0321
28
+ 16 C16 18.8870 -14.1930 20.3230 C.3 1 IGN 0.0369
29
+ 17 O31 16.5740 -12.9000 22.8600 O.2 1 IGN -0.3905
30
+ 18 C32 17.3450 -13.6610 22.2510 C.2 1 IGN 0.2293
31
+ 19 C33 17.5520 -15.0700 22.9300 C.3 1 IGN 0.0685
32
+ 20 C34 17.9260 -15.0000 24.4670 C.3 1 IGN 0.0108
33
+ 21 C51 20.4370 -14.8210 23.5540 C.3 1 IGN -0.0499
34
+ 22 C52 19.4520 -14.7400 24.8050 C.3 1 IGN -0.0338
35
+ 23 C53 19.7200 -13.3720 25.5260 C.3 1 IGN -0.0499
36
+ 24 C54 21.2120 -13.2650 25.9910 C.3 1 IGN -0.0528
37
+ 25 C55 22.1600 -13.3700 24.7530 C.3 1 IGN -0.0530
38
+ 26 C56 21.9280 -14.7230 24.0130 C.3 1 IGN -0.0528
39
+ 27 N21 16.2730 -15.8300 22.8380 N.4 1 IGN 0.2577
40
+ 28 C22 15.6600 -16.2720 21.5460 C.3 1 IGN 0.0214
41
+ 29 C23 14.2430 -16.7860 21.7690 C.2 1 IGN 0.0813
42
+ 30 O24 13.8040 -16.9480 22.9320 O.co2 1 IGN -0.5645
43
+ 31 O25 13.5190 -17.0470 20.7800 O.co2 1 IGN -0.5645
44
+ 32 H1 16.2561 -9.6774 20.7074 H 1 IGN 0.1851
45
+ 33 H2 13.7131 -10.8458 19.6648 H 1 IGN 0.0521
46
+ 34 H3 14.1806 -9.1134 19.5802 H 1 IGN 0.0521
47
+ 35 H4 13.6091 -8.7040 21.7867 H 1 IGN 0.0318
48
+ 36 H5 13.9470 -10.3908 22.3036 H 1 IGN 0.0318
49
+ 37 H6 11.7921 -10.4571 20.4059 H 1 IGN 0.0689
50
+ 38 H7 11.4293 -9.1783 21.6142 H 1 IGN 0.0689
51
+ 39 H8 11.7781 -12.1036 22.1276 H 1 IGN 0.2642
52
+ 40 H9 10.2522 -11.7578 25.3622 H 1 IGN 0.2615
53
+ 41 H10 10.8765 -12.8759 24.1201 H 1 IGN 0.2615
54
+ 42 H11 11.0059 -8.8400 23.4745 H 1 IGN 0.2615
55
+ 43 H12 10.3209 -9.4716 24.9959 H 1 IGN 0.2615
56
+ 44 H13 18.0242 -11.1126 21.2236 H 1 IGN 0.0802
57
+ 45 H14 18.3836 -10.5347 18.9070 H 1 IGN 0.0312
58
+ 46 H15 17.9101 -12.1750 18.3484 H 1 IGN 0.0312
59
+ 47 H16 20.4126 -11.5193 19.9968 H 1 IGN 0.0268
60
+ 48 H17 20.3783 -11.7996 18.2229 H 1 IGN 0.0268
61
+ 49 H18 20.9721 -13.7849 19.8953 H 1 IGN 0.0285
62
+ 50 H19 19.9581 -14.0802 18.4423 H 1 IGN 0.0285
63
+ 51 H20 19.3883 -14.8136 21.0803 H 1 IGN 0.0524
64
+ 52 H21 18.2640 -14.8316 19.6795 H 1 IGN 0.0524
65
+ 53 H22 18.3491 -15.6045 22.3925 H 1 IGN 0.1099
66
+ 54 H23 17.6392 -15.9576 24.9261 H 1 IGN 0.0348
67
+ 55 H24 17.3391 -14.1865 24.9184 H 1 IGN 0.0348
68
+ 56 H25 20.2161 -13.9909 22.8669 H 1 IGN 0.0268
69
+ 57 H26 20.2820 -15.7781 23.0345 H 1 IGN 0.0268
70
+ 58 H27 19.7462 -15.5394 25.5009 H 1 IGN 0.0304
71
+ 59 H28 19.0630 -13.2938 26.4047 H 1 IGN 0.0268
72
+ 60 H29 19.5005 -12.5493 24.8296 H 1 IGN 0.0268
73
+ 61 H30 21.4355 -14.0821 26.6927 H 1 IGN 0.0265
74
+ 62 H31 21.3703 -12.2983 26.4914 H 1 IGN 0.0265
75
+ 63 H32 23.2057 -13.3143 25.0898 H 1 IGN 0.0265
76
+ 64 H33 21.9519 -12.5382 24.0639 H 1 IGN 0.0265
77
+ 65 H34 22.1570 -15.5564 24.6935 H 1 IGN 0.0265
78
+ 66 H35 22.5861 -14.7766 23.1332 H 1 IGN 0.0265
79
+ 67 H36 15.5788 -15.2545 23.2884 H 1 IGN 0.2049
80
+ 68 H37 16.4137 -16.6703 23.3766 H 1 IGN 0.2049
81
+ 69 H38 16.2719 -17.0770 21.1129 H 1 IGN 0.0989
82
+ 70 H39 15.6296 -15.4201 20.8508 H 1 IGN 0.0989
83
+ @<TRIPOS>BOND
84
+ 1 12 1 1
85
+ 2 1 3 am
86
+ 3 1 2 2
87
+ 4 3 4 1
88
+ 5 4 5 1
89
+ 6 5 6 1
90
+ 7 6 7 1
91
+ 8 7 8 ar
92
+ 9 8 10 ar
93
+ 10 8 9 ar
94
+ 11 12 11 1
95
+ 12 12 13 1
96
+ 13 13 14 1
97
+ 14 14 15 1
98
+ 15 15 16 1
99
+ 16 11 16 1
100
+ 17 11 18 am
101
+ 18 18 19 1
102
+ 19 18 17 2
103
+ 20 19 27 1
104
+ 21 19 20 1
105
+ 22 20 22 1
106
+ 23 22 21 1
107
+ 24 22 23 1
108
+ 25 23 24 1
109
+ 26 24 25 1
110
+ 27 25 26 1
111
+ 28 21 26 1
112
+ 29 27 28 1
113
+ 30 28 29 1
114
+ 31 29 31 ar
115
+ 32 29 30 ar
116
+ 33 3 32 1
117
+ 34 4 33 1
118
+ 35 4 34 1
119
+ 36 5 35 1
120
+ 37 5 36 1
121
+ 38 6 37 1
122
+ 39 6 38 1
123
+ 40 7 39 1
124
+ 41 9 40 1
125
+ 42 9 41 1
126
+ 43 10 42 1
127
+ 44 10 43 1
128
+ 45 12 44 1
129
+ 46 13 45 1
130
+ 47 13 46 1
131
+ 48 14 47 1
132
+ 49 14 48 1
133
+ 50 15 49 1
134
+ 51 15 50 1
135
+ 52 16 51 1
136
+ 53 16 52 1
137
+ 54 19 53 1
138
+ 55 20 54 1
139
+ 56 20 55 1
140
+ 57 21 56 1
141
+ 58 21 57 1
142
+ 59 22 58 1
143
+ 60 23 59 1
144
+ 61 23 60 1
145
+ 62 24 61 1
146
+ 63 24 62 1
147
+ 64 25 63 1
148
+ 65 25 64 1
149
+ 66 26 65 1
150
+ 67 26 66 1
151
+ 68 27 67 1
152
+ 69 27 68 1
153
+ 70 28 69 1
154
+ 71 28 70 1
155
+ @<TRIPOS>SUBSTRUCTURE
156
+ 1 IGN 1
157
+
1k21/1k21_ligand.sdf ADDED
@@ -0,0 +1,147 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1k21_ligand
2
+ -I-interpret-
3
+
4
+ 70 71 0 0 0 0 0 0 0 0999 V2000
5
+ 16.1560 -11.6220 20.2070 C 0 0 0 0 0
6
+ 15.4510 -12.5640 19.8270 O 0 0 0 0 0
7
+ 15.6340 -10.3970 20.3990 N 0 0 0 0 0
8
+ 14.2220 -10.0260 20.1930 C 0 0 0 0 0
9
+ 13.4950 -9.7650 21.5200 C 0 0 0 0 0
10
+ 12.0090 -10.0930 21.4210 C 0 0 0 0 0
11
+ 11.6090 -11.1220 22.3900 N 0 0 0 0 0
12
+ 11.0030 -10.8830 23.6710 C 0 0 0 0 0
13
+ 10.6870 -11.9160 24.4420 N 0 0 0 0 0
14
+ 10.7580 -9.6370 24.0780 N 0 0 0 0 0
15
+ 17.9500 -13.2540 21.0630 N 0 0 0 0 0
16
+ 17.6790 -11.8530 20.4870 C 0 0 0 0 0
17
+ 18.4230 -11.6090 19.1400 C 0 0 0 0 0
18
+ 19.8990 -12.0490 19.1810 C 0 0 0 0 0
19
+ 20.0010 -13.5800 19.4210 C 0 0 0 0 0
20
+ 18.8870 -14.1930 20.3230 C 0 0 0 0 0
21
+ 16.5740 -12.9000 22.8600 O 0 0 0 0 0
22
+ 17.3450 -13.6610 22.2510 C 0 0 0 0 0
23
+ 17.5520 -15.0700 22.9300 C 0 0 0 0 0
24
+ 17.9260 -15.0000 24.4670 C 0 0 0 0 0
25
+ 20.4370 -14.8210 23.5540 C 0 0 0 0 0
26
+ 19.4520 -14.7400 24.8050 C 0 0 0 0 0
27
+ 19.7200 -13.3720 25.5260 C 0 0 0 0 0
28
+ 21.2120 -13.2650 25.9910 C 0 0 0 0 0
29
+ 22.1600 -13.3700 24.7530 C 0 0 0 0 0
30
+ 21.9280 -14.7230 24.0130 C 0 0 0 0 0
31
+ 16.2730 -15.8300 22.8380 N 0 3 0 0 0
32
+ 15.6600 -16.2720 21.5460 C 0 0 0 0 0
33
+ 14.2430 -16.7860 21.7690 C 0 0 0 0 0
34
+ 13.8040 -16.9480 22.9320 O 0 0 0 0 0
35
+ 13.5190 -17.0470 20.7800 O 0 0 0 0 0
36
+ 16.2686 -9.6630 20.7136 H 0 0 0 0 0
37
+ 13.7228 -10.8532 19.6884 H 0 0 0 0 0
38
+ 14.1934 -9.1098 19.6033 H 0 0 0 0 0
39
+ 13.5984 -8.7084 21.7669 H 0 0 0 0 0
40
+ 13.9376 -10.4019 22.2859 H 0 0 0 0 0
41
+ 11.8087 -10.4714 20.4186 H 0 0 0 0 0
42
+ 11.4439 -9.1855 21.6336 H 0 0 0 0 0
43
+ 11.7765 -12.0940 22.1302 H 0 0 0 0 0
44
+ 10.2539 -11.7595 25.3521 H 0 0 0 0 0
45
+ 10.3251 -9.4732 24.9870 H 0 0 0 0 0
46
+ 11.0034 -8.8477 23.4804 H 0 0 0 0 0
47
+ 18.0422 -11.1629 21.2486 H 0 0 0 0 0
48
+ 18.4006 -10.5383 18.9369 H 0 0 0 0 0
49
+ 17.9217 -12.1977 18.3718 H 0 0 0 0 0
50
+ 20.4024 -11.5277 19.9952 H 0 0 0 0 0
51
+ 20.3682 -11.8071 18.2274 H 0 0 0 0 0
52
+ 20.9465 -13.7514 19.9355 H 0 0 0 0 0
53
+ 19.9059 -14.0545 18.4443 H 0 0 0 0 0
54
+ 19.4206 -14.7348 21.1039 H 0 0 0 0 0
55
+ 18.2469 -14.7536 19.6417 H 0 0 0 0 0
56
+ 18.3816 -15.5409 22.4027 H 0 0 0 0 0
57
+ 17.6844 -15.9778 24.8837 H 0 0 0 0 0
58
+ 17.3752 -14.1529 24.8758 H 0 0 0 0 0
59
+ 20.2210 -13.9900 22.8826 H 0 0 0 0 0
60
+ 20.2868 -15.7758 23.0500 H 0 0 0 0 0
61
+ 19.6714 -15.5656 25.4820 H 0 0 0 0 0
62
+ 19.0752 -13.3065 26.4023 H 0 0 0 0 0
63
+ 19.5128 -12.5619 24.8268 H 0 0 0 0 0
64
+ 21.4329 -14.0765 26.6844 H 0 0 0 0 0
65
+ 21.3681 -12.3058 26.4846 H 0 0 0 0 0
66
+ 23.1953 -13.3198 25.0902 H 0 0 0 0 0
67
+ 21.9480 -12.5477 24.0696 H 0 0 0 0 0
68
+ 22.1540 -15.5484 24.6881 H 0 0 0 0 0
69
+ 22.5795 -14.7750 23.1407 H 0 0 0 0 0
70
+ 15.5880 -15.1658 23.1985 H 0 0 0 0 0
71
+ 16.5005 -16.7131 23.2949 H 0 0 0 0 0
72
+ 16.2643 -17.0764 21.1267 H 0 0 0 0 0
73
+ 15.6229 -15.4218 20.8649 H 0 0 0 0 0
74
+ 14.4821 -16.7029 23.5658 H 0 0 0 0 0
75
+ 12 1 1 0 0 0
76
+ 1 3 1 0 0 0
77
+ 1 2 2 0 0 0
78
+ 3 4 1 0 0 0
79
+ 4 5 1 0 0 0
80
+ 5 6 1 0 0 0
81
+ 6 7 1 0 0 0
82
+ 7 8 1 0 0 0
83
+ 8 10 1 0 0 0
84
+ 8 9 2 0 0 0
85
+ 12 11 1 0 0 0
86
+ 12 13 1 0 0 0
87
+ 13 14 1 0 0 0
88
+ 14 15 1 0 0 0
89
+ 15 16 1 0 0 0
90
+ 11 16 1 0 0 0
91
+ 11 18 1 0 0 0
92
+ 18 19 1 0 0 0
93
+ 18 17 2 0 0 0
94
+ 19 27 1 0 0 0
95
+ 19 20 1 0 0 0
96
+ 20 22 1 0 0 0
97
+ 22 21 1 0 0 0
98
+ 22 23 1 0 0 0
99
+ 23 24 1 0 0 0
100
+ 24 25 1 0 0 0
101
+ 25 26 1 0 0 0
102
+ 21 26 1 0 0 0
103
+ 27 28 1 0 0 0
104
+ 28 29 1 0 0 0
105
+ 29 31 2 0 0 0
106
+ 29 30 1 0 0 0
107
+ 3 32 1 0 0 0
108
+ 4 33 1 0 0 0
109
+ 4 34 1 0 0 0
110
+ 5 35 1 0 0 0
111
+ 5 36 1 0 0 0
112
+ 6 37 1 0 0 0
113
+ 6 38 1 0 0 0
114
+ 7 39 1 0 0 0
115
+ 9 40 1 0 0 0
116
+ 10 41 1 0 0 0
117
+ 10 42 1 0 0 0
118
+ 12 43 1 0 0 0
119
+ 13 44 1 0 0 0
120
+ 13 45 1 0 0 0
121
+ 14 46 1 0 0 0
122
+ 14 47 1 0 0 0
123
+ 15 48 1 0 0 0
124
+ 15 49 1 0 0 0
125
+ 16 50 1 0 0 0
126
+ 16 51 1 0 0 0
127
+ 19 52 1 0 0 0
128
+ 20 53 1 0 0 0
129
+ 20 54 1 0 0 0
130
+ 21 55 1 0 0 0
131
+ 21 56 1 0 0 0
132
+ 22 57 1 0 0 0
133
+ 23 58 1 0 0 0
134
+ 23 59 1 0 0 0
135
+ 24 60 1 0 0 0
136
+ 24 61 1 0 0 0
137
+ 25 62 1 0 0 0
138
+ 25 63 1 0 0 0
139
+ 26 64 1 0 0 0
140
+ 26 65 1 0 0 0
141
+ 27 66 1 0 0 0
142
+ 27 67 1 0 0 0
143
+ 28 68 1 0 0 0
144
+ 28 69 1 0 0 0
145
+ 30 70 1 0 0 0
146
+ M END
147
+ $$$$
1k21/1k21_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1k21/1k21_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1nxy/1nxy_ligand.mol2 ADDED
@@ -0,0 +1,87 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:49 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1nxy_ligand
7
+ 35 36 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 CAF 32.7700 6.1980 22.2480 C.2 1 SM2 -0.0791
14
+ 2 CAC 31.3800 6.4350 22.0450 C.2 1 SM2 -0.0924
15
+ 3 CAB 30.9840 7.6690 22.5300 C.2 1 SM2 -0.0189
16
+ 4 SAD 32.2980 8.5170 23.2260 S.3 1 SM2 -0.0419
17
+ 5 CAE 33.3780 7.2410 22.8710 C.2 1 SM2 0.0307
18
+ 6 CAG 34.8700 7.2730 23.2140 C.3 1 SM2 0.0818
19
+ 7 CAH 35.5380 8.5890 22.7550 C.2 1 SM2 0.1904
20
+ 8 OAI 36.6010 8.9870 23.2150 O.2 1 SM2 -0.3936
21
+ 9 NAJ 34.8470 9.2790 21.7930 N.am 1 SM2 -0.2815
22
+ 10 CAK 35.3570 10.5530 21.2690 C.3 1 SM2 0.0855
23
+ 11 B 34.4390 11.7050 21.8790 B 1 SM2 0.7343
24
+ 12 OAT 35.0520 12.8950 22.4930 O.3 1 SM2 -0.4949
25
+ 13 OAO 32.9660 11.5690 21.8750 O.3 1 SM2 -0.4949
26
+ 14 CAL 35.3020 10.5200 19.7470 C.ar 1 SM2 -0.0253
27
+ 15 CAQ 35.7760 9.3810 19.0330 C.ar 1 SM2 -0.0454
28
+ 16 CAM 34.7640 11.6340 19.0350 C.ar 1 SM2 -0.0569
29
+ 17 CAN 34.6980 11.6040 17.6090 C.ar 1 SM2 -0.0649
30
+ 18 CAS 35.1720 10.4560 16.8930 C.ar 1 SM2 -0.0545
31
+ 19 CAR 35.7150 9.3400 17.6080 C.ar 1 SM2 0.0035
32
+ 20 CAU 36.2230 8.1130 16.8640 C.2 1 SM2 0.0613
33
+ 21 OAW 36.5550 7.0980 17.5260 O.co2 1 SM2 -0.5607
34
+ 22 OAV 36.2880 8.1380 15.6100 O.co2 1 SM2 -0.5607
35
+ 23 H1 33.2842 5.2887 21.9403 H 1 SM2 0.0284
36
+ 24 H2 30.7069 5.7269 21.5638 H 1 SM2 0.0373
37
+ 25 H3 29.9660 8.0519 22.4758 H 1 SM2 0.0603
38
+ 26 H4 35.3679 6.4285 22.7152 H 1 SM2 0.0685
39
+ 27 H5 34.9868 7.1760 24.3035 H 1 SM2 0.0685
40
+ 28 H6 33.9854 8.9107 21.4437 H 1 SM2 0.1866
41
+ 29 H7 36.3985 10.7049 21.5885 H 1 SM2 0.0583
42
+ 30 H8 34.8086 12.9376 23.4103 H 1 SM2 0.1668
43
+ 31 H9 32.7254 10.7558 21.4470 H 1 SM2 0.1668
44
+ 32 H10 36.1865 8.5383 19.5775 H 1 SM2 0.0590
45
+ 33 H11 34.4058 12.5021 19.5765 H 1 SM2 0.0578
46
+ 34 H12 34.2893 12.4496 17.0676 H 1 SM2 0.0606
47
+ 35 H13 35.1195 10.4326 15.8105 H 1 SM2 0.0593
48
+ @<TRIPOS>BOND
49
+ 1 1 2 1
50
+ 2 1 5 2
51
+ 3 2 3 2
52
+ 4 3 4 1
53
+ 5 4 5 1
54
+ 6 5 6 1
55
+ 7 6 7 1
56
+ 8 7 8 2
57
+ 9 7 9 am
58
+ 10 9 10 1
59
+ 11 10 11 1
60
+ 12 10 14 1
61
+ 13 11 12 1
62
+ 14 11 13 1
63
+ 15 14 15 ar
64
+ 16 14 16 ar
65
+ 17 15 19 ar
66
+ 18 16 17 ar
67
+ 19 17 18 ar
68
+ 20 18 19 ar
69
+ 21 19 20 1
70
+ 22 20 21 ar
71
+ 23 20 22 ar
72
+ 24 1 23 1
73
+ 25 2 24 1
74
+ 26 3 25 1
75
+ 27 6 26 1
76
+ 28 6 27 1
77
+ 29 9 28 1
78
+ 30 10 29 1
79
+ 31 12 30 1
80
+ 32 13 31 1
81
+ 33 15 32 1
82
+ 34 16 33 1
83
+ 35 17 34 1
84
+ 36 18 35 1
85
+ @<TRIPOS>SUBSTRUCTURE
86
+ 1 SM2 1
87
+
1nxy/1nxy_ligand.sdf ADDED
@@ -0,0 +1,79 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1nxy_ligand
2
+ -I-interpret-
3
+
4
+ 36 37 0 0 0 0 0 0 0 0999 V2000
5
+ 32.7700 6.1980 22.2480 C 0 0 0 0 0
6
+ 31.3800 6.4350 22.0450 C 0 0 0 0 0
7
+ 30.9840 7.6690 22.5300 C 0 0 0 0 0
8
+ 32.2980 8.5170 23.2260 S 0 0 0 0 0
9
+ 33.3780 7.2410 22.8710 C 0 0 0 0 0
10
+ 34.8700 7.2730 23.2140 C 0 0 0 0 0
11
+ 35.5380 8.5890 22.7550 C 0 0 0 0 0
12
+ 36.6010 8.9870 23.2150 O 0 0 0 0 0
13
+ 34.8470 9.2790 21.7930 N 0 0 0 0 0
14
+ 35.3570 10.5530 21.2690 C 0 0 0 0 0
15
+ 34.4390 11.7050 21.8790 B 0 0 0 0 0
16
+ 35.0520 12.8950 22.4930 O 0 0 0 0 0
17
+ 32.9660 11.5690 21.8750 O 0 0 0 0 0
18
+ 35.3020 10.5200 19.7470 C 0 0 0 0 0
19
+ 35.7760 9.3810 19.0330 C 0 0 0 0 0
20
+ 34.7640 11.6340 19.0350 C 0 0 0 0 0
21
+ 34.6980 11.6040 17.6090 C 0 0 0 0 0
22
+ 35.1720 10.4560 16.8930 C 0 0 0 0 0
23
+ 35.7150 9.3400 17.6080 C 0 0 0 0 0
24
+ 36.2230 8.1130 16.8640 C 0 0 0 0 0
25
+ 36.5550 7.0980 17.5260 O 0 0 0 0 0
26
+ 36.2880 8.1380 15.6100 O 0 0 0 0 0
27
+ 33.2846 5.2878 21.9400 H 0 0 0 0 0
28
+ 30.7063 5.7263 21.5634 H 0 0 0 0 0
29
+ 29.9650 8.0523 22.4758 H 0 0 0 0 0
30
+ 35.3571 6.4446 22.6996 H 0 0 0 0 0
31
+ 34.9739 7.1961 24.2963 H 0 0 0 0 0
32
+ 33.9682 8.9033 21.4368 H 0 0 0 0 0
33
+ 36.3946 10.7330 21.5501 H 0 0 0 0 0
34
+ 34.3614 13.4834 22.8069 H 0 0 0 0 0
35
+ 32.5728 12.3470 22.2772 H 0 0 0 0 0
36
+ 36.1888 8.5337 19.5805 H 0 0 0 0 0
37
+ 34.4038 12.5069 19.5794 H 0 0 0 0 0
38
+ 34.2871 12.4542 17.0646 H 0 0 0 0 0
39
+ 35.1192 10.4324 15.8045 H 0 0 0 0 0
40
+ 36.4351 7.2745 18.4620 H 0 0 0 0 0
41
+ 1 2 4 0 0 0
42
+ 1 5 4 0 0 0
43
+ 2 3 4 0 0 0
44
+ 3 4 4 0 0 0
45
+ 4 5 4 0 0 0
46
+ 5 6 1 0 0 0
47
+ 6 7 1 0 0 0
48
+ 7 8 2 0 0 0
49
+ 7 9 1 0 0 0
50
+ 9 10 1 0 0 0
51
+ 10 11 1 0 0 0
52
+ 10 14 1 0 0 0
53
+ 11 12 1 0 0 0
54
+ 11 13 1 0 0 0
55
+ 14 15 4 0 0 0
56
+ 14 16 4 0 0 0
57
+ 15 19 4 0 0 0
58
+ 16 17 4 0 0 0
59
+ 17 18 4 0 0 0
60
+ 18 19 4 0 0 0
61
+ 19 20 1 0 0 0
62
+ 20 21 1 0 0 0
63
+ 20 22 2 0 0 0
64
+ 1 23 1 0 0 0
65
+ 2 24 1 0 0 0
66
+ 3 25 1 0 0 0
67
+ 6 26 1 0 0 0
68
+ 6 27 1 0 0 0
69
+ 9 28 1 0 0 0
70
+ 10 29 1 0 0 0
71
+ 12 30 1 0 0 0
72
+ 13 31 1 0 0 0
73
+ 15 32 1 0 0 0
74
+ 16 33 1 0 0 0
75
+ 17 34 1 0 0 0
76
+ 18 35 1 0 0 0
77
+ 21 36 1 0 0 0
78
+ M END
79
+ $$$$
1nxy/1nxy_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1nxy/1nxy_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1pk0/1pk0_ligand.mol2 ADDED
@@ -0,0 +1,89 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:52 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1pk0_ligand
7
+ 36 37 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 PG 31.8310 72.3580 44.6520 P.3 1 EMA 0.1880
14
+ 2 O1G 30.6500 71.5090 44.8280 O.co2 1 EMA -0.6091
15
+ 3 O2G 32.5140 72.7120 45.9040 O.co2 1 EMA -0.6091
16
+ 4 O3G 31.5690 73.4940 43.6980 O.co2 1 EMA -0.6091
17
+ 5 PB 33.0080 70.5340 42.5560 P.3 1 EMA 0.3533
18
+ 6 O1B 31.6760 69.8730 42.3120 O.co2 1 EMA -0.5650
19
+ 7 O2B 33.5120 71.4410 41.5240 O.co2 1 EMA -0.5650
20
+ 8 O3B 32.9580 71.3470 44.0090 O.3 1 EMA -0.1545
21
+ 9 PA 34.1100 68.0690 43.6200 P.3 1 EMA 0.2167
22
+ 10 O1A 34.0740 68.4610 45.0350 O.co2 1 EMA -0.5704
23
+ 11 O2A 33.0750 67.1140 43.1360 O.co2 1 EMA -0.5704
24
+ 12 O3A 34.0580 69.4140 42.8250 O.3 1 EMA -0.1428
25
+ 13 C5 35.6010 67.5400 43.3490 C.3 1 EMA 0.1451
26
+ 14 O5 36.1030 66.9960 42.1030 O.3 1 EMA -0.3561
27
+ 15 C4 35.1390 65.9460 41.7350 C.3 1 EMA 0.0772
28
+ 16 C1 35.5920 64.7750 40.8530 C.3 1 EMA 0.0841
29
+ 17 N9 36.9850 64.6300 40.3220 N.pl3 1 EMA -0.2194
30
+ 18 C8 37.6780 65.3810 39.3950 C.2 1 EMA 0.1098
31
+ 19 N7 38.8760 64.9470 39.1140 N.2 1 EMA -0.2958
32
+ 20 C5 38.9530 63.8190 39.8850 C.ar 1 EMA 0.1044
33
+ 21 C6 40.0270 62.8550 40.0700 C.ar 1 EMA 0.1298
34
+ 22 N6 41.1110 62.9700 39.3620 N.pl3 1 EMA -0.3152
35
+ 23 N1 39.8090 61.8460 40.9160 N.ar 1 EMA -0.2698
36
+ 24 C2 38.6660 61.7440 41.6040 C.ar 1 EMA 0.0533
37
+ 25 N3 37.6050 62.5970 41.5370 N.ar 1 EMA -0.2714
38
+ 26 C4 37.8370 63.6110 40.6420 C.ar 1 EMA 0.1592
39
+ 27 H1 35.7650 66.7483 44.0949 H 1 EMA 0.0796
40
+ 28 H2 36.2547 68.3959 43.5728 H 1 EMA 0.0796
41
+ 29 H3 34.3123 66.4428 41.2061 H 1 EMA 0.0588
42
+ 30 H4 34.7654 65.5122 42.6743 H 1 EMA 0.0588
43
+ 31 H5 34.9345 64.7910 39.9713 H 1 EMA 0.0637
44
+ 32 H6 35.3976 63.8646 41.4390 H 1 EMA 0.0637
45
+ 33 H7 37.2558 66.2714 38.9315 H 1 EMA 0.1348
46
+ 34 H8 41.8791 62.2945 39.4828 H 1 EMA 0.1820
47
+ 35 H9 41.2019 63.7366 38.6801 H 1 EMA 0.1820
48
+ 36 H10 38.5750 60.9015 42.2800 H 1 EMA 0.0996
49
+ @<TRIPOS>BOND
50
+ 1 1 2 ar
51
+ 2 1 3 ar
52
+ 3 1 4 ar
53
+ 4 8 1 1
54
+ 5 5 6 ar
55
+ 6 5 7 ar
56
+ 7 5 8 1
57
+ 8 12 5 1
58
+ 9 9 10 ar
59
+ 10 9 11 ar
60
+ 11 9 12 1
61
+ 12 9 13 1
62
+ 13 13 14 1
63
+ 14 14 15 1
64
+ 15 15 16 1
65
+ 16 16 17 1
66
+ 17 17 18 1
67
+ 18 17 26 1
68
+ 19 18 19 2
69
+ 20 19 20 1
70
+ 21 20 21 ar
71
+ 22 20 26 ar
72
+ 23 21 22 1
73
+ 24 21 23 ar
74
+ 25 23 24 ar
75
+ 26 24 25 ar
76
+ 27 25 26 ar
77
+ 28 13 27 1
78
+ 29 13 28 1
79
+ 30 15 29 1
80
+ 31 15 30 1
81
+ 32 16 31 1
82
+ 33 16 32 1
83
+ 34 18 33 1
84
+ 35 22 34 1
85
+ 36 22 35 1
86
+ 37 24 36 1
87
+ @<TRIPOS>SUBSTRUCTURE
88
+ 1 EMA 1
89
+
1pk0/1pk0_ligand.sdf ADDED
@@ -0,0 +1,87 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1pk0_ligand
2
+ -I-interpret-
3
+
4
+ 40 41 0 0 0 0 0 0 0 0999 V2000
5
+ 31.8310 72.3580 44.6520 P 0 0 0 0 0
6
+ 30.6500 71.5090 44.8280 O 0 0 0 0 0
7
+ 32.5140 72.7120 45.9040 O 0 0 0 0 0
8
+ 31.5690 73.4940 43.6980 O 0 0 0 0 0
9
+ 33.0080 70.5340 42.5560 P 0 0 0 0 0
10
+ 31.6760 69.8730 42.3120 O 0 0 0 0 0
11
+ 33.5120 71.4410 41.5240 O 0 0 0 0 0
12
+ 32.9580 71.3470 44.0090 O 0 0 0 0 0
13
+ 34.1100 68.0690 43.6200 P 0 0 0 0 0
14
+ 34.0740 68.4610 45.0350 O 0 0 0 0 0
15
+ 33.0750 67.1140 43.1360 O 0 0 0 0 0
16
+ 34.0580 69.4140 42.8250 O 0 0 0 0 0
17
+ 35.6010 67.5400 43.3490 C 0 0 0 0 0
18
+ 36.1030 66.9960 42.1030 O 0 0 0 0 0
19
+ 35.1390 65.9460 41.7350 C 0 0 0 0 0
20
+ 35.5920 64.7750 40.8530 C 0 0 0 0 0
21
+ 36.9850 64.6300 40.3220 N 0 0 0 0 0
22
+ 37.6780 65.3810 39.3950 C 0 0 0 0 0
23
+ 38.8760 64.9470 39.1140 N 0 0 0 0 0
24
+ 38.9530 63.8190 39.8850 C 0 0 0 0 0
25
+ 40.0270 62.8550 40.0700 C 0 0 0 0 0
26
+ 41.1110 62.9700 39.3620 N 0 0 0 0 0
27
+ 39.8090 61.8460 40.9160 N 0 0 0 0 0
28
+ 38.6660 61.7440 41.6040 C 0 0 0 0 0
29
+ 37.6050 62.5970 41.5370 N 0 0 0 0 0
30
+ 37.8370 63.6110 40.6420 C 0 0 0 0 0
31
+ 33.2730 73.2660 45.7076 H 0 0 0 0 0
32
+ 32.3635 74.0256 43.6093 H 0 0 0 0 0
33
+ 31.4596 69.3073 43.0568 H 0 0 0 0 0
34
+ 33.2111 66.9431 42.2012 H 0 0 0 0 0
35
+ 35.6535 66.6734 44.0080 H 0 0 0 0 0
36
+ 36.1835 68.4565 43.4430 H 0 0 0 0 0
37
+ 34.3835 66.4613 41.1419 H 0 0 0 0 0
38
+ 34.8589 65.4851 42.6822 H 0 0 0 0 0
39
+ 34.9985 64.9070 39.9483 H 0 0 0 0 0
40
+ 35.4936 63.9166 41.5175 H 0 0 0 0 0
41
+ 37.2554 66.2722 38.9310 H 0 0 0 0 0
42
+ 41.2010 63.7292 38.6868 H 0 0 0 0 0
43
+ 41.8717 62.3011 39.4817 H 0 0 0 0 0
44
+ 38.5745 60.8969 42.2838 H 0 0 0 0 0
45
+ 1 2 2 0 0 0
46
+ 1 3 1 0 0 0
47
+ 1 4 1 0 0 0
48
+ 8 1 1 0 0 0
49
+ 5 6 1 0 0 0
50
+ 5 7 2 0 0 0
51
+ 5 8 1 0 0 0
52
+ 12 5 1 0 0 0
53
+ 9 10 2 0 0 0
54
+ 9 11 1 0 0 0
55
+ 9 12 1 0 0 0
56
+ 9 13 1 0 0 0
57
+ 13 14 1 0 0 0
58
+ 14 15 1 0 0 0
59
+ 15 16 1 0 0 0
60
+ 16 17 1 0 0 0
61
+ 17 18 4 0 0 0
62
+ 17 26 4 0 0 0
63
+ 18 19 4 0 0 0
64
+ 19 20 4 0 0 0
65
+ 20 21 4 0 0 0
66
+ 20 26 4 0 0 0
67
+ 21 22 1 0 0 0
68
+ 21 23 4 0 0 0
69
+ 23 24 4 0 0 0
70
+ 24 25 4 0 0 0
71
+ 25 26 4 0 0 0
72
+ 3 27 1 0 0 0
73
+ 4 28 1 0 0 0
74
+ 6 29 1 0 0 0
75
+ 11 30 1 0 0 0
76
+ 13 31 1 0 0 0
77
+ 13 32 1 0 0 0
78
+ 15 33 1 0 0 0
79
+ 15 34 1 0 0 0
80
+ 16 35 1 0 0 0
81
+ 16 36 1 0 0 0
82
+ 18 37 1 0 0 0
83
+ 22 38 1 0 0 0
84
+ 22 39 1 0 0 0
85
+ 24 40 1 0 0 0
86
+ M END
87
+ $$$$
1pk0/1pk0_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1pk0/1pk0_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1tlo/1tlo_ligand.mol2 ADDED
@@ -0,0 +1,123 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:52 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1tlo_ligand
7
+ 54 53 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 C1 11.3560 38.6840 21.2470 C.2 1 E64 0.0396
14
+ 2 O1 12.0590 39.1600 20.2640 O.co2 1 E64 -0.5688
15
+ 3 O2 11.8570 38.1280 22.1950 O.co2 1 E64 -0.5688
16
+ 4 C2 9.8560 38.8710 21.0810 C.3 1 E64 0.0436
17
+ 5 C3 9.2660 40.1820 21.7920 C.3 1 E64 0.1549
18
+ 6 O3 9.2680 39.9510 23.1160 O.3 1 E64 -0.3697
19
+ 7 C4 7.8540 40.4750 21.2040 C.2 1 E64 0.2089
20
+ 8 O4 7.5320 40.6680 19.9900 O.2 1 E64 -0.3940
21
+ 9 N1 6.8880 40.5200 22.1490 N.am 1 E64 -0.2634
22
+ 10 C6 5.4980 40.4710 21.9440 C.3 1 E64 0.1311
23
+ 11 C7 4.8270 39.2110 22.3620 C.3 1 E64 -0.0101
24
+ 12 C8 5.2350 37.8430 21.9560 C.3 1 E64 -0.0425
25
+ 13 C9 4.2220 36.8430 22.6590 C.3 1 E64 -0.0625
26
+ 14 C10 5.1860 37.8330 20.3800 C.3 1 E64 -0.0625
27
+ 15 C11 4.7060 41.6090 22.6330 C.2 1 E64 0.2017
28
+ 16 O5 5.1170 41.8990 23.7500 O.2 1 E64 -0.3945
29
+ 17 N2 3.7130 42.1920 22.0040 N.am 1 E64 -0.2851
30
+ 18 C12 2.8940 43.2910 22.4670 C.3 1 E64 0.0311
31
+ 19 C13 3.1880 44.3060 21.3730 C.3 1 E64 -0.0296
32
+ 20 C14 1.9970 45.2000 21.3610 C.3 1 E64 -0.0180
33
+ 21 C15 1.9340 45.7620 19.9430 C.3 1 E64 0.0626
34
+ 22 N3 1.6180 44.5160 19.2410 N.pl3 1 E64 -0.2723
35
+ 23 C16 1.3820 44.1600 17.8120 C.cat 1 E64 0.2882
36
+ 24 N4 1.1290 42.8130 17.7850 N.pl3 1 E64 -0.2849
37
+ 25 N5 1.3790 44.9150 16.5860 N.pl3 1 E64 -0.2849
38
+ 26 H1 9.3509 37.9920 21.5079 H 1 E64 0.0481
39
+ 27 H2 9.6347 38.9346 20.0054 H 1 E64 0.0481
40
+ 28 H3 9.9161 41.0443 21.5827 H 1 E64 0.0856
41
+ 29 H4 8.7252 39.1946 23.3052 H 1 E64 0.2135
42
+ 30 H5 7.1959 40.5965 23.0973 H 1 E64 0.1883
43
+ 31 H6 5.3544 40.5752 20.8584 H 1 E64 0.0800
44
+ 32 H7 3.7830 39.3136 22.0311 H 1 E64 0.0315
45
+ 33 H8 4.8650 39.2118 23.4613 H 1 E64 0.0315
46
+ 34 H9 6.2583 37.6186 22.2915 H 1 E64 0.0298
47
+ 35 H10 4.4815 35.8086 22.3894 H 1 E64 0.0232
48
+ 36 H11 3.1976 37.0632 22.3242 H 1 E64 0.0232
49
+ 37 H12 4.2851 36.9642 23.7505 H 1 E64 0.0232
50
+ 38 H13 5.9182 38.5531 19.9858 H 1 E64 0.0232
51
+ 39 H14 4.1774 38.1139 20.0427 H 1 E64 0.0232
52
+ 40 H15 5.4283 36.8251 20.0120 H 1 E64 0.0232
53
+ 41 H16 3.4964 41.8338 21.0958 H 1 E64 0.1851
54
+ 42 H17 3.2126 43.6511 23.4564 H 1 E64 0.0520
55
+ 43 H18 1.8280 43.0219 22.5005 H 1 E64 0.0520
56
+ 44 H19 3.3078 43.8056 20.4008 H 1 E64 0.0286
57
+ 45 H20 4.0992 44.8761 21.6067 H 1 E64 0.0286
58
+ 46 H21 2.1167 46.0123 22.0930 H 1 E64 0.0300
59
+ 47 H22 1.0846 44.6304 21.5912 H 1 E64 0.0300
60
+ 48 H23 2.8955 46.1886 19.6212 H 1 E64 0.0689
61
+ 49 H24 1.1416 46.5164 19.8291 H 1 E64 0.0689
62
+ 50 H25 1.5420 43.7070 19.8739 H 1 E64 0.2642
63
+ 51 H26 0.9353 42.3432 16.8891 H 1 E64 0.2615
64
+ 52 H27 1.1326 42.2707 18.6607 H 1 E64 0.2615
65
+ 53 H28 1.5689 45.9272 16.6040 H 1 E64 0.2615
66
+ 54 H29 1.1870 44.4429 15.6909 H 1 E64 0.2615
67
+ @<TRIPOS>BOND
68
+ 1 1 2 ar
69
+ 2 1 3 ar
70
+ 3 1 4 1
71
+ 4 4 5 1
72
+ 5 5 6 1
73
+ 6 5 7 1
74
+ 7 7 8 2
75
+ 8 7 9 am
76
+ 9 9 10 1
77
+ 10 10 11 1
78
+ 11 10 15 1
79
+ 12 11 12 1
80
+ 13 12 13 1
81
+ 14 12 14 1
82
+ 15 15 16 2
83
+ 16 15 17 am
84
+ 17 17 18 1
85
+ 18 18 19 1
86
+ 19 19 20 1
87
+ 20 20 21 1
88
+ 21 21 22 1
89
+ 22 22 23 ar
90
+ 23 23 24 ar
91
+ 24 23 25 ar
92
+ 25 4 26 1
93
+ 26 4 27 1
94
+ 27 5 28 1
95
+ 28 6 29 1
96
+ 29 9 30 1
97
+ 30 10 31 1
98
+ 31 11 32 1
99
+ 32 11 33 1
100
+ 33 12 34 1
101
+ 34 13 35 1
102
+ 35 13 36 1
103
+ 36 13 37 1
104
+ 37 14 38 1
105
+ 38 14 39 1
106
+ 39 14 40 1
107
+ 40 17 41 1
108
+ 41 18 42 1
109
+ 42 18 43 1
110
+ 43 19 44 1
111
+ 44 19 45 1
112
+ 45 20 46 1
113
+ 46 20 47 1
114
+ 47 21 48 1
115
+ 48 21 49 1
116
+ 49 22 50 1
117
+ 50 24 51 1
118
+ 51 24 52 1
119
+ 52 25 53 1
120
+ 53 25 54 1
121
+ @<TRIPOS>SUBSTRUCTURE
122
+ 1 E64 1
123
+
1tlo/1tlo_ligand.sdf ADDED
@@ -0,0 +1,113 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1tlo_ligand
2
+ -I-interpret-
3
+
4
+ 54 53 0 0 0 0 0 0 0 0999 V2000
5
+ 11.3560 38.6840 21.2470 C 0 0 0 0 0
6
+ 12.0590 39.1600 20.2640 O 0 0 0 0 0
7
+ 11.8570 38.1280 22.1950 O 0 0 0 0 0
8
+ 9.8560 38.8710 21.0810 C 0 0 0 0 0
9
+ 9.2660 40.1820 21.7920 C 0 0 0 0 0
10
+ 9.2680 39.9510 23.1160 O 0 0 0 0 0
11
+ 7.8540 40.4750 21.2040 C 0 0 0 0 0
12
+ 7.5320 40.6680 19.9900 O 0 0 0 0 0
13
+ 6.8880 40.5200 22.1490 N 0 0 0 0 0
14
+ 5.4980 40.4710 21.9440 C 0 0 0 0 0
15
+ 4.8270 39.2110 22.3620 C 0 0 0 0 0
16
+ 5.2350 37.8430 21.9560 C 0 0 0 0 0
17
+ 4.2220 36.8430 22.6590 C 0 0 0 0 0
18
+ 5.1860 37.8330 20.3800 C 0 0 0 0 0
19
+ 4.7060 41.6090 22.6330 C 0 0 0 0 0
20
+ 5.1170 41.8990 23.7500 O 0 0 0 0 0
21
+ 3.7130 42.1920 22.0040 N 0 0 0 0 0
22
+ 2.8940 43.2910 22.4670 C 0 0 0 0 0
23
+ 3.1880 44.3060 21.3730 C 0 0 0 0 0
24
+ 1.9970 45.2000 21.3610 C 0 0 0 0 0
25
+ 1.9340 45.7620 19.9430 C 0 0 0 0 0
26
+ 1.6180 44.5160 19.2410 N 0 0 0 0 0
27
+ 1.3820 44.1600 17.8120 C 0 0 0 0 0
28
+ 1.1290 42.8130 17.7850 N 0 0 0 0 0
29
+ 1.3790 44.9150 16.5860 N 0 0 0 0 0
30
+ 11.4730 39.5595 19.6170 H 0 0 0 0 0
31
+ 9.3741 38.0114 21.5468 H 0 0 0 0 0
32
+ 9.6638 38.9736 20.0130 H 0 0 0 0 0
33
+ 9.8645 41.0744 21.6090 H 0 0 0 0 0
34
+ 10.1661 39.7789 23.4083 H 0 0 0 0 0
35
+ 7.2021 40.5980 23.1163 H 0 0 0 0 0
36
+ 5.4656 40.5671 20.8587 H 0 0 0 0 0
37
+ 3.8478 39.3066 21.8929 H 0 0 0 0 0
38
+ 5.0149 39.1968 23.4356 H 0 0 0 0 0
39
+ 6.2378 37.5397 22.2568 H 0 0 0 0 0
40
+ 4.2855 36.9641 23.7404 H 0 0 0 0 0
41
+ 3.2074 37.0622 22.3265 H 0 0 0 0 0
42
+ 4.4801 35.8184 22.3911 H 0 0 0 0 0
43
+ 4.1730 38.0600 20.0478 H 0 0 0 0 0
44
+ 5.8739 38.5840 19.9916 H 0 0 0 0 0
45
+ 5.4773 36.8481 20.0150 H 0 0 0 0 0
46
+ 3.4920 41.8266 21.0777 H 0 0 0 0 0
47
+ 3.1220 43.6330 23.4765 H 0 0 0 0 0
48
+ 1.8382 43.0497 22.5903 H 0 0 0 0 0
49
+ 3.3493 43.8286 20.4065 H 0 0 0 0 0
50
+ 4.1091 44.8565 21.5643 H 0 0 0 0 0
51
+ 2.0811 45.9925 22.1047 H 0 0 0 0 0
52
+ 1.0862 44.6606 21.6210 H 0 0 0 0 0
53
+ 2.8329 46.2761 19.6027 H 0 0 0 0 0
54
+ 1.2253 46.5765 19.7932 H 0 0 0 0 0
55
+ 1.5427 43.7148 19.8678 H 0 0 0 0 0
56
+ 1.1326 42.2759 18.6521 H 0 0 0 0 0
57
+ 1.1889 44.4475 15.6996 H 0 0 0 0 0
58
+ 1.5670 45.9174 16.6039 H 0 0 0 0 0
59
+ 1 2 1 0 0 0
60
+ 1 3 2 0 0 0
61
+ 1 4 1 0 0 0
62
+ 4 5 1 0 0 0
63
+ 5 6 1 0 0 0
64
+ 5 7 1 0 0 0
65
+ 7 8 2 0 0 0
66
+ 7 9 1 0 0 0
67
+ 9 10 1 0 0 0
68
+ 10 11 1 0 0 0
69
+ 10 15 1 0 0 0
70
+ 11 12 1 0 0 0
71
+ 12 13 1 0 0 0
72
+ 12 14 1 0 0 0
73
+ 15 16 2 0 0 0
74
+ 15 17 1 0 0 0
75
+ 17 18 1 0 0 0
76
+ 18 19 1 0 0 0
77
+ 19 20 1 0 0 0
78
+ 20 21 1 0 0 0
79
+ 21 22 1 0 0 0
80
+ 22 23 1 0 0 0
81
+ 23 24 2 0 0 0
82
+ 23 25 1 0 0 0
83
+ 2 26 1 0 0 0
84
+ 4 27 1 0 0 0
85
+ 4 28 1 0 0 0
86
+ 5 29 1 0 0 0
87
+ 6 30 1 0 0 0
88
+ 9 31 1 0 0 0
89
+ 10 32 1 0 0 0
90
+ 11 33 1 0 0 0
91
+ 11 34 1 0 0 0
92
+ 12 35 1 0 0 0
93
+ 13 36 1 0 0 0
94
+ 13 37 1 0 0 0
95
+ 13 38 1 0 0 0
96
+ 14 39 1 0 0 0
97
+ 14 40 1 0 0 0
98
+ 14 41 1 0 0 0
99
+ 17 42 1 0 0 0
100
+ 18 43 1 0 0 0
101
+ 18 44 1 0 0 0
102
+ 19 45 1 0 0 0
103
+ 19 46 1 0 0 0
104
+ 20 47 1 0 0 0
105
+ 20 48 1 0 0 0
106
+ 21 49 1 0 0 0
107
+ 21 50 1 0 0 0
108
+ 22 51 1 0 0 0
109
+ 24 52 1 0 0 0
110
+ 25 53 1 0 0 0
111
+ 25 54 1 0 0 0
112
+ M END
113
+ $$$$
1tlo/1tlo_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1tlo/1tlo_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1utz/1utz_ligand.mol2 ADDED
@@ -0,0 +1,119 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:52 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1utz_ligand
7
+ 50 53 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 S1 42.5820 53.4910 19.9380 S.3 1 PF3 -0.0198
14
+ 2 C1 41.4810 54.6540 19.2170 C.2 1 PF3 0.1029
15
+ 3 C2 40.1980 54.2890 19.3660 C.2 1 PF3 -0.0441
16
+ 4 C3 40.0440 53.0170 20.0830 C.2 1 PF3 -0.0167
17
+ 5 C4 41.2300 52.4950 20.4380 C.2 1 PF3 0.0151
18
+ 6 C5 38.7370 52.4390 20.3830 C.ar 1 PF3 -0.0278
19
+ 7 C6 37.7910 52.1620 19.3670 C.ar 1 PF3 -0.0567
20
+ 8 C7 36.5240 51.6360 19.7060 C.ar 1 PF3 -0.0540
21
+ 9 C8 36.1660 51.3730 21.0580 C.ar 1 PF3 -0.0121
22
+ 10 C9 37.1280 51.6480 22.0560 C.ar 1 PF3 -0.0540
23
+ 11 C10 38.3890 52.1710 21.7290 C.ar 1 PF3 -0.0567
24
+ 12 C11 34.7990 50.8340 21.4270 C.ar 1 PF3 -0.0014
25
+ 13 C12 34.2900 50.9980 22.7380 C.ar 1 PF3 -0.0282
26
+ 14 C13 33.0140 50.5000 23.0590 C.ar 1 PF3 0.0094
27
+ 15 N1 32.2270 49.8540 22.1570 N.ar 1 PF3 -0.2997
28
+ 16 C14 32.7210 49.6980 20.8960 C.ar 1 PF3 0.0094
29
+ 17 C15 33.9890 50.1700 20.4950 C.ar 1 PF3 -0.0282
30
+ 18 C16 41.9130 55.9150 18.5690 C.2 1 PF3 0.2106
31
+ 19 O1 43.0770 56.2570 18.7590 O.2 1 PF3 -0.3903
32
+ 20 N2 41.0010 56.6360 17.8630 N.am 1 PF3 -0.2718
33
+ 21 C17 41.2460 57.9580 17.2620 C.3 1 PF3 0.0861
34
+ 22 C18 39.8250 58.4840 16.9140 C.3 1 PF3 0.0330
35
+ 23 C19 38.8120 58.3910 18.0910 C.2 1 PF3 0.0390
36
+ 24 O2 38.9940 59.0840 19.0880 O.co2 1 PF3 -0.5688
37
+ 25 O3 37.8640 57.6130 17.9960 O.co2 1 PF3 -0.5688
38
+ 26 C20 42.1620 58.0270 16.0130 C.ar 1 PF3 -0.0165
39
+ 27 C21 42.4630 59.3120 15.4420 C.ar 1 PF3 -0.0580
40
+ 28 C22 43.3000 59.4390 14.3080 C.ar 1 PF3 -0.0685
41
+ 29 C23 43.8570 58.2820 13.7140 C.ar 1 PF3 -0.0687
42
+ 30 C24 43.5730 57.0120 14.2550 C.ar 1 PF3 -0.0685
43
+ 31 C25 42.7380 56.8860 15.3900 C.ar 1 PF3 -0.0580
44
+ 32 H1 39.3589 54.8751 18.9940 H 1 PF3 0.0526
45
+ 33 H2 41.3391 51.5554 20.9776 H 1 PF3 0.0857
46
+ 34 H3 38.0385 52.3533 18.3291 H 1 PF3 0.0598
47
+ 35 H4 35.8087 51.4282 18.9185 H 1 PF3 0.0631
48
+ 36 H5 36.8874 51.4512 23.0945 H 1 PF3 0.0631
49
+ 37 H6 39.1055 52.3723 22.5171 H 1 PF3 0.0598
50
+ 38 H7 34.8813 51.5054 23.4916 H 1 PF3 0.0707
51
+ 39 H8 32.6422 50.6369 24.0680 H 1 PF3 0.0818
52
+ 40 H9 32.1082 49.1850 20.1636 H 1 PF3 0.0818
53
+ 41 H10 34.3329 50.0209 19.4779 H 1 PF3 0.0707
54
+ 42 H11 40.0921 56.2368 17.7425 H 1 PF3 0.1868
55
+ 43 H12 41.7014 58.6020 18.0287 H 1 PF3 0.0737
56
+ 44 H13 39.4335 57.8932 16.0728 H 1 PF3 0.0475
57
+ 45 H14 39.9102 59.5386 16.6131 H 1 PF3 0.0475
58
+ 46 H15 42.0393 60.2034 15.8903 H 1 PF3 0.0557
59
+ 47 H16 43.5135 60.4187 13.8962 H 1 PF3 0.0599
60
+ 48 H17 44.4999 58.3720 12.8459 H 1 PF3 0.0559
61
+ 49 H18 43.9974 56.1253 13.7981 H 1 PF3 0.0599
62
+ 50 H19 42.5333 55.9005 15.7925 H 1 PF3 0.0557
63
+ @<TRIPOS>BOND
64
+ 1 1 2 1
65
+ 2 1 5 1
66
+ 3 2 3 2
67
+ 4 2 18 1
68
+ 5 3 4 1
69
+ 6 4 5 2
70
+ 7 4 6 1
71
+ 8 6 7 ar
72
+ 9 6 11 ar
73
+ 10 7 8 ar
74
+ 11 8 9 ar
75
+ 12 9 10 ar
76
+ 13 9 12 1
77
+ 14 10 11 ar
78
+ 15 12 13 ar
79
+ 16 12 17 ar
80
+ 17 13 14 ar
81
+ 18 14 15 ar
82
+ 19 15 16 ar
83
+ 20 16 17 ar
84
+ 21 18 19 2
85
+ 22 18 20 am
86
+ 23 20 21 1
87
+ 24 21 22 1
88
+ 25 21 26 1
89
+ 26 22 23 1
90
+ 27 23 24 ar
91
+ 28 23 25 ar
92
+ 29 26 27 ar
93
+ 30 26 31 ar
94
+ 31 27 28 ar
95
+ 32 28 29 ar
96
+ 33 29 30 ar
97
+ 34 30 31 ar
98
+ 35 3 32 1
99
+ 36 5 33 1
100
+ 37 7 34 1
101
+ 38 8 35 1
102
+ 39 10 36 1
103
+ 40 11 37 1
104
+ 41 13 38 1
105
+ 42 14 39 1
106
+ 43 16 40 1
107
+ 44 17 41 1
108
+ 45 20 42 1
109
+ 46 21 43 1
110
+ 47 22 44 1
111
+ 48 22 45 1
112
+ 49 27 46 1
113
+ 50 28 47 1
114
+ 51 29 48 1
115
+ 52 30 49 1
116
+ 53 31 50 1
117
+ @<TRIPOS>SUBSTRUCTURE
118
+ 1 PF3 1
119
+
1utz/1utz_ligand.sdf ADDED
@@ -0,0 +1,111 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1utz_ligand
2
+ -I-interpret-
3
+
4
+ 51 54 0 0 0 0 0 0 0 0999 V2000
5
+ 42.5820 53.4910 19.9380 S 0 0 0 0 0
6
+ 41.4810 54.6540 19.2170 C 0 0 0 0 0
7
+ 40.1980 54.2890 19.3660 C 0 0 0 0 0
8
+ 40.0440 53.0170 20.0830 C 0 0 0 0 0
9
+ 41.2300 52.4950 20.4380 C 0 0 0 0 0
10
+ 38.7370 52.4390 20.3830 C 0 0 0 0 0
11
+ 37.7910 52.1620 19.3670 C 0 0 0 0 0
12
+ 36.5240 51.6360 19.7060 C 0 0 0 0 0
13
+ 36.1660 51.3730 21.0580 C 0 0 0 0 0
14
+ 37.1280 51.6480 22.0560 C 0 0 0 0 0
15
+ 38.3890 52.1710 21.7290 C 0 0 0 0 0
16
+ 34.7990 50.8340 21.4270 C 0 0 0 0 0
17
+ 34.2900 50.9980 22.7380 C 0 0 0 0 0
18
+ 33.0140 50.5000 23.0590 C 0 0 0 0 0
19
+ 32.2270 49.8540 22.1570 N 0 0 0 0 0
20
+ 32.7210 49.6980 20.8960 C 0 0 0 0 0
21
+ 33.9890 50.1700 20.4950 C 0 0 0 0 0
22
+ 41.9130 55.9150 18.5690 C 0 0 0 0 0
23
+ 43.0770 56.2570 18.7590 O 0 0 0 0 0
24
+ 41.0010 56.6360 17.8630 N 0 0 0 0 0
25
+ 41.2460 57.9580 17.2620 C 0 0 0 0 0
26
+ 39.8250 58.4840 16.9140 C 0 0 0 0 0
27
+ 38.8120 58.3910 18.0910 C 0 0 0 0 0
28
+ 38.9940 59.0840 19.0880 O 0 0 0 0 0
29
+ 37.8640 57.6130 17.9960 O 0 0 0 0 0
30
+ 42.1620 58.0270 16.0130 C 0 0 0 0 0
31
+ 42.4630 59.3120 15.4420 C 0 0 0 0 0
32
+ 43.3000 59.4390 14.3080 C 0 0 0 0 0
33
+ 43.8570 58.2820 13.7140 C 0 0 0 0 0
34
+ 43.5730 57.0120 14.2550 C 0 0 0 0 0
35
+ 42.7380 56.8860 15.3900 C 0 0 0 0 0
36
+ 39.3582 54.8756 18.9936 H 0 0 0 0 0
37
+ 41.3392 51.5545 20.9781 H 0 0 0 0 0
38
+ 38.0398 52.3544 18.3234 H 0 0 0 0 0
39
+ 35.8047 51.4270 18.9141 H 0 0 0 0 0
40
+ 36.8861 51.4501 23.1002 H 0 0 0 0 0
41
+ 39.1095 52.3734 22.5215 H 0 0 0 0 0
42
+ 34.8846 51.5082 23.4958 H 0 0 0 0 0
43
+ 32.6401 50.6377 24.0736 H 0 0 0 0 0
44
+ 32.1048 49.1821 20.1596 H 0 0 0 0 0
45
+ 34.3348 50.0200 19.4722 H 0 0 0 0 0
46
+ 40.0739 56.2288 17.7401 H 0 0 0 0 0
47
+ 41.8114 58.5526 17.9796 H 0 0 0 0 0
48
+ 39.4392 57.8639 16.1048 H 0 0 0 0 0
49
+ 39.9243 59.5380 16.6545 H 0 0 0 0 0
50
+ 37.9002 57.1685 17.1459 H 0 0 0 0 0
51
+ 42.0369 60.2083 15.8927 H 0 0 0 0 0
52
+ 43.5147 60.4241 13.8939 H 0 0 0 0 0
53
+ 44.5035 58.3725 12.8411 H 0 0 0 0 0
54
+ 43.9998 56.1204 13.7956 H 0 0 0 0 0
55
+ 42.5322 55.8951 15.7948 H 0 0 0 0 0
56
+ 1 2 4 0 0 0
57
+ 1 5 4 0 0 0
58
+ 2 3 4 0 0 0
59
+ 2 18 1 0 0 0
60
+ 3 4 4 0 0 0
61
+ 4 5 4 0 0 0
62
+ 4 6 1 0 0 0
63
+ 6 7 4 0 0 0
64
+ 6 11 4 0 0 0
65
+ 7 8 4 0 0 0
66
+ 8 9 4 0 0 0
67
+ 9 10 4 0 0 0
68
+ 9 12 1 0 0 0
69
+ 10 11 4 0 0 0
70
+ 12 13 4 0 0 0
71
+ 12 17 4 0 0 0
72
+ 13 14 4 0 0 0
73
+ 14 15 4 0 0 0
74
+ 15 16 4 0 0 0
75
+ 16 17 4 0 0 0
76
+ 18 19 2 0 0 0
77
+ 18 20 1 0 0 0
78
+ 20 21 1 0 0 0
79
+ 21 22 1 0 0 0
80
+ 21 26 1 0 0 0
81
+ 22 23 1 0 0 0
82
+ 23 24 2 0 0 0
83
+ 23 25 1 0 0 0
84
+ 26 27 4 0 0 0
85
+ 26 31 4 0 0 0
86
+ 27 28 4 0 0 0
87
+ 28 29 4 0 0 0
88
+ 29 30 4 0 0 0
89
+ 30 31 4 0 0 0
90
+ 3 32 1 0 0 0
91
+ 5 33 1 0 0 0
92
+ 7 34 1 0 0 0
93
+ 8 35 1 0 0 0
94
+ 10 36 1 0 0 0
95
+ 11 37 1 0 0 0
96
+ 13 38 1 0 0 0
97
+ 14 39 1 0 0 0
98
+ 16 40 1 0 0 0
99
+ 17 41 1 0 0 0
100
+ 20 42 1 0 0 0
101
+ 21 43 1 0 0 0
102
+ 22 44 1 0 0 0
103
+ 22 45 1 0 0 0
104
+ 25 46 1 0 0 0
105
+ 27 47 1 0 0 0
106
+ 28 48 1 0 0 0
107
+ 29 49 1 0 0 0
108
+ 30 50 1 0 0 0
109
+ 31 51 1 0 0 0
110
+ M END
111
+ $$$$
1utz/1utz_protein_esmfold_aligned_tr_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1utz/1utz_protein_processed_fix.pdb ADDED
The diff for this file is too large to render. See raw diff
 
1uvt/1uvt_ligand.mol2 ADDED
@@ -0,0 +1,114 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ ###
2
+ ### Created by X-TOOL on Mon Sep 10 21:12:46 2018
3
+ ###
4
+
5
+ @<TRIPOS>MOLECULE
6
+ 1uvt_ligand
7
+ 48 50 1 0 0
8
+ SMALL
9
+ GAST_HUCK
10
+
11
+
12
+ @<TRIPOS>ATOM
13
+ 1 N1 45.6890 56.1380 40.4510 N.ar 1 I48 -0.3162
14
+ 2 C2 47.0040 55.6120 40.5200 C.ar 1 I48 -0.0037
15
+ 3 C3 48.0910 56.4960 40.4990 C.ar 1 I48 -0.0169
16
+ 4 C4 47.9000 57.8890 40.4890 C.ar 1 I48 0.0586
17
+ 5 C5 46.6050 58.4010 40.3980 C.ar 1 I48 -0.0169
18
+ 6 C6 45.5020 57.5480 40.4580 C.ar 1 I48 -0.0037
19
+ 7 NA1 49.0120 58.7930 40.4820 N.pl3 1 I48 -0.3120
20
+ 8 CA2 50.3570 58.2420 40.4260 C.3 1 I48 0.0541
21
+ 9 CA3 51.3090 58.9710 41.3910 C.3 1 I48 0.0896
22
+ 10 OA4 50.7670 59.0030 42.7200 O.3 1 I48 -0.3221
23
+ 11 C21 51.6860 59.2410 43.7660 C.ar 1 I48 0.0691
24
+ 12 C22 51.6380 58.5000 44.9710 C.ar 1 I48 -0.0252
25
+ 13 C23 52.2140 59.0250 46.1450 C.ar 1 I48 0.0470
26
+ 14 C24 53.0180 60.1840 46.0710 C.ar 1 I48 -0.0560
27
+ 15 C25 53.1420 60.8710 44.8590 C.ar 1 I48 -0.0703
28
+ 16 C26 52.5570 60.3530 43.6960 C.ar 1 I48 -0.0495
29
+ 17 C27 54.1780 61.9570 44.7040 C.3 1 I48 -0.0373
30
+ 18 NB1 52.2660 58.2310 47.3180 N.am 1 I48 -0.1915
31
+ 19 SB2 50.9340 58.3490 48.2640 S.o2 1 I48 0.0891
32
+ 20 OBA 51.1400 57.4350 49.3600 O.2 1 I48 -0.1446
33
+ 21 OBB 49.7050 58.0150 47.5850 O.2 1 I48 -0.1446
34
+ 22 C31 50.7250 59.9530 48.9100 C.ar 1 I48 0.1140
35
+ 23 C32 49.4410 60.5040 48.9530 C.ar 1 I48 -0.0346
36
+ 24 C33 49.3270 61.8920 49.1570 C.ar 1 I48 -0.0599
37
+ 25 C34 50.3900 62.5890 49.7680 C.ar 1 I48 -0.0616
38
+ 26 C35 51.6420 61.9500 49.9290 C.ar 1 I48 -0.0599
39
+ 27 C36 51.7980 60.5990 49.5380 C.ar 1 I48 -0.0346
40
+ 28 H1 47.1659 54.5423 40.5880 H 1 I48 0.0780
41
+ 29 H2 49.0993 56.0980 40.4903 H 1 I48 0.0610
42
+ 30 H3 46.4548 59.4680 40.2800 H 1 I48 0.0610
43
+ 31 H4 44.5010 57.9608 40.5100 H 1 I48 0.0780
44
+ 32 H5 48.8620 59.8115 40.5159 H 1 I48 0.1799
45
+ 33 H6 50.7419 58.3434 39.4005 H 1 I48 0.0543
46
+ 34 H7 50.3182 57.1773 40.6995 H 1 I48 0.0543
47
+ 35 H8 51.4588 60.0021 41.0385 H 1 I48 0.0634
48
+ 36 H9 52.2752 58.4456 41.4089 H 1 I48 0.0634
49
+ 37 H10 51.1580 57.5283 44.9907 H 1 I48 0.0345
50
+ 38 H11 53.5383 60.5406 46.9526 H 1 I48 0.0330
51
+ 39 H12 52.7735 60.8077 42.7361 H 1 I48 0.0343
52
+ 40 H13 54.5430 62.2599 45.6965 H 1 I48 0.0386
53
+ 41 H14 53.7276 62.8241 44.1987 H 1 I48 0.0386
54
+ 42 H15 55.0187 61.5788 44.1039 H 1 I48 0.0386
55
+ 43 H16 53.0469 57.6501 47.5477 H 1 I48 0.2158
56
+ 44 H17 48.5612 59.8822 48.8331 H 1 I48 0.0637
57
+ 45 H18 48.4319 62.4195 48.8478 H 1 I48 0.0618
58
+ 46 H19 50.2488 63.6073 50.1119 H 1 I48 0.0618
59
+ 47 H20 52.4795 62.4939 50.3507 H 1 I48 0.0618
60
+ 48 H21 52.7289 60.0745 49.7207 H 1 I48 0.0637
61
+ @<TRIPOS>BOND
62
+ 1 1 6 ar
63
+ 2 1 2 ar
64
+ 3 2 3 ar
65
+ 4 3 4 ar
66
+ 5 4 7 1
67
+ 6 4 5 ar
68
+ 7 5 6 ar
69
+ 8 7 8 1
70
+ 9 8 9 1
71
+ 10 9 10 1
72
+ 11 10 11 1
73
+ 12 11 16 ar
74
+ 13 11 12 ar
75
+ 14 12 13 ar
76
+ 15 13 18 1
77
+ 16 13 14 ar
78
+ 17 14 15 ar
79
+ 18 15 17 1
80
+ 19 15 16 ar
81
+ 20 18 19 am
82
+ 21 19 22 1
83
+ 22 19 21 2
84
+ 23 19 20 2
85
+ 24 22 27 ar
86
+ 25 22 23 ar
87
+ 26 23 24 ar
88
+ 27 24 25 ar
89
+ 28 25 26 ar
90
+ 29 26 27 ar
91
+ 30 2 28 1
92
+ 31 3 29 1
93
+ 32 5 30 1
94
+ 33 6 31 1
95
+ 34 7 32 1
96
+ 35 8 33 1
97
+ 36 8 34 1
98
+ 37 9 35 1
99
+ 38 9 36 1
100
+ 39 12 37 1
101
+ 40 14 38 1
102
+ 41 16 39 1
103
+ 42 17 40 1
104
+ 43 17 41 1
105
+ 44 17 42 1
106
+ 45 18 43 1
107
+ 46 23 44 1
108
+ 47 24 45 1
109
+ 48 25 46 1
110
+ 49 26 47 1
111
+ 50 27 48 1
112
+ @<TRIPOS>SUBSTRUCTURE
113
+ 1 I48 1
114
+
1uvt/1uvt_ligand.sdf ADDED
@@ -0,0 +1,104 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ 1uvt_ligand
2
+ -I-interpret-
3
+
4
+ 48 50 0 0 0 0 0 0 0 0999 V2000
5
+ 45.6890 56.1380 40.4510 N 0 0 0 0 0
6
+ 47.0040 55.6120 40.5200 C 0 0 0 0 0
7
+ 48.0910 56.4960 40.4990 C 0 0 0 0 0
8
+ 47.9000 57.8890 40.4890 C 0 0 0 0 0
9
+ 46.6050 58.4010 40.3980 C 0 0 0 0 0
10
+ 45.5020 57.5480 40.4580 C 0 0 0 0 0
11
+ 49.0120 58.7930 40.4820 N 0 0 0 0 0
12
+ 50.3570 58.2420 40.4260 C 0 0 0 0 0
13
+ 51.3090 58.9710 41.3910 C 0 0 0 0 0
14
+ 50.7670 59.0030 42.7200 O 0 0 0 0 0
15
+ 51.6860 59.2410 43.7660 C 0 0 0 0 0
16
+ 51.6380 58.5000 44.9710 C 0 0 0 0 0
17
+ 52.2140 59.0250 46.1450 C 0 0 0 0 0
18
+ 53.0180 60.1840 46.0710 C 0 0 0 0 0
19
+ 53.1420 60.8710 44.8590 C 0 0 0 0 0
20
+ 52.5570 60.3530 43.6960 C 0 0 0 0 0
21
+ 54.1780 61.9570 44.7040 C 0 0 0 0 0
22
+ 52.2660 58.2310 47.3180 N 0 0 0 0 0
23
+ 50.9340 58.3490 48.2640 S 0 0 0 0 0
24
+ 51.1400 57.4350 49.3600 O 0 0 0 0 0
25
+ 49.7050 58.0150 47.5850 O 0 0 0 0 0
26
+ 50.7250 59.9530 48.9100 C 0 0 0 0 0
27
+ 49.4410 60.5040 48.9530 C 0 0 0 0 0
28
+ 49.3270 61.8920 49.1570 C 0 0 0 0 0
29
+ 50.3900 62.5890 49.7680 C 0 0 0 0 0
30
+ 51.6420 61.9500 49.9290 C 0 0 0 0 0
31
+ 51.7980 60.5990 49.5380 C 0 0 0 0 0
32
+ 47.1668 54.5364 40.5883 H 0 0 0 0 0
33
+ 49.1048 56.0958 40.4902 H 0 0 0 0 0
34
+ 46.4540 59.4739 40.2793 H 0 0 0 0 0
35
+ 44.4955 57.9631 40.5103 H 0 0 0 0 0
36
+ 48.8634 59.8016 40.5156 H 0 0 0 0 0
37
+ 50.7365 58.3627 39.4114 H 0 0 0 0 0
38
+ 50.3112 57.1921 40.7153 H 0 0 0 0 0
39
+ 51.4437 59.9951 41.0430 H 0 0 0 0 0
40
+ 52.2600 58.4388 41.4134 H 0 0 0 0 0
41
+ 51.1553 57.5229 44.9909 H 0 0 0 0 0
42
+ 53.5412 60.5426 46.9574 H 0 0 0 0 0
43
+ 52.7747 60.8102 42.7307 H 0 0 0 0 0
44
+ 53.9888 62.7446 45.4333 H 0 0 0 0 0
45
+ 55.1702 61.5372 44.8698 H 0 0 0 0 0
46
+ 54.1208 62.3709 43.6973 H 0 0 0 0 0
47
+ 53.0625 57.6385 47.5523 H 0 0 0 0 0
48
+ 48.5563 59.8787 48.8324 H 0 0 0 0 0
49
+ 48.4269 62.4224 48.8461 H 0 0 0 0 0
50
+ 50.2480 63.6129 50.1138 H 0 0 0 0 0
51
+ 52.4841 62.4969 50.3531 H 0 0 0 0 0
52
+ 52.7340 60.0716 49.7217 H 0 0 0 0 0
53
+ 1 6 4 0 0 0
54
+ 1 2 4 0 0 0
55
+ 2 3 4 0 0 0
56
+ 3 4 4 0 0 0
57
+ 4 7 1 0 0 0
58
+ 4 5 4 0 0 0
59
+ 5 6 4 0 0 0
60
+ 7 8 1 0 0 0
61
+ 8 9 1 0 0 0
62
+ 9 10 1 0 0 0
63
+ 10 11 1 0 0 0
64
+ 11 16 4 0 0 0
65
+ 11 12 4 0 0 0
66
+ 12 13 4 0 0 0
67
+ 13 18 1 0 0 0
68
+ 13 14 4 0 0 0
69
+ 14 15 4 0 0 0
70
+ 15 17 1 0 0 0
71
+ 15 16 4 0 0 0
72
+ 18 19 1 0 0 0
73
+ 19 22 1 0 0 0
74
+ 19 21 2 0 0 0
75
+ 19 20 2 0 0 0
76
+ 22 27 4 0 0 0
77
+ 22 23 4 0 0 0
78
+ 23 24 4 0 0 0
79
+ 24 25 4 0 0 0
80
+ 25 26 4 0 0 0
81
+ 26 27 4 0 0 0
82
+ 2 28 1 0 0 0
83
+ 3 29 1 0 0 0
84
+ 5 30 1 0 0 0
85
+ 6 31 1 0 0 0
86
+ 7 32 1 0 0 0
87
+ 8 33 1 0 0 0
88
+ 8 34 1 0 0 0
89
+ 9 35 1 0 0 0
90
+ 9 36 1 0 0 0
91
+ 12 37 1 0 0 0
92
+ 14 38 1 0 0 0
93
+ 16 39 1 0 0 0
94
+ 17 40 1 0 0 0
95
+ 17 41 1 0 0 0
96
+ 17 42 1 0 0 0
97
+ 18 43 1 0 0 0
98
+ 23 44 1 0 0 0
99
+ 24 45 1 0 0 0
100
+ 25 46 1 0 0 0
101
+ 26 47 1 0 0 0
102
+ 27 48 1 0 0 0
103
+ M END
104
+ $$$$