KuangshiAi
Remove napari_mcp_evals folder and add bioimage_data folder with Git LFS
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Task:
Load the Hydrogen Atom dataset from "hydrogen_atom/data/hydrogen_atom_128x128x128_uint8.raw", the information about this dataset:
Hydrogen Atom
Description: Simulation of the spatial probability distribution of the electron in an hydrogen atom, residing in a strong magnetic field.
Data Type: uint8
Data Byte Order: little Endian
Data Spacing: 1x1x1
Data Extent: 128x128x128
Data loading is very important, make sure you correctly load the dataset according to their features.
Visualize the electron probability distribution:
1. Apply volume rendering with a colormap showing probability density (purple-blue-cyan-yellow)
2. Create multiple isosurfaces at different probability levels (e.g., 30%, 60%, 90% of max)
3. Use semi-transparent rendering for outer orbitals (opacity 0.3) and more opaque for inner (opacity 0.7)
4. Add a slice plane through the center to show the wavefunction structure
Please think step by step and make sure to fulfill all the visualization goals mentioned above.
Finally, save the paraview state as "hydrogen_atom/results/hydrogen_atom.pvsm"