KuangshiAi
Remove napari_mcp_evals folder and add bioimage_data folder with Git LFS
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Task:
Load the MRI Woman dataset from "mri_woman/data/mri_woman_256x256x109_uint16.raw", the information about this dataset:
MRI Woman
Description: MRI scan of a woman's head
Data Type: uint16
Data Byte Order: little Endian
Data Spacing: 1x1x1.5
Data Extent: 256x256x109
Data loading is very important, make sure you correctly load the dataset according to their features.
Visualize the brain structures:
1. Apply volume rendering with a grayscale-to-color transfer function
2. Create a clip plane to show internal brain structures
3. Extract an isosurface for the skull or brain boundary (value around 80-120)
4. Use semi-transparent rendering (opacity 0.5-0.7) to show layers
Please think step by step and make sure to fulfill all the visualization goals mentioned above.
Finally, save the paraview state as "mri_woman/results/mri_woman.pvsm"