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40d081b | 1 2 3 4 5 6 7 8 9 10 11 | 1. Please load the Martini coarse-grained simulation file from "curved-membrane/data/curved-membrane.".
2. Use VMD to show a zoomed in view of the membrane side coloring the water blue and the lipid phosphate (PO4 beads) red, and take a screenshot.
3. Analyze the visualization and answer the following questions:
Q1: Is there any water that penetrates into the membrane phase? (yes/no)
4. Save your work:
Save the VMD state as "curved-membrane/results/{agent_mode}/curved-membrane.vmd".
Save the screenshot of the visualization as "curved-membrane/results/{agent_mode}/curved-membrane.png".
Save the answers to the analysis questions in plain text as "curved-membrane/results/{agent_mode}/answers.txt". |