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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| ], |
| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| ], |
| [ |
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| [ |
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| ] |
| ], |
| [ |
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| [ |
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| ], |
| [ |
| "tests/test_rand_spatial_cropd.py", |
| [ |
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| ], |
| [ |
| "tests/test_regunet.py", |
| [ |
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| ] |
| ], |
| [ |
| "tests/test_regunet_block.py", |
| [ |
| "TestRegistrationResidualConvBlock", |
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| ] |
| ], |
| [ |
| "tests/test_regunet_block.py", |
| [ |
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| ] |
| ], |
| [ |
| "tests/test_regunet_block.py", |
| [ |
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| ] |
| ], |
| [ |
| "tests/test_remove_repeated_channel.py", |
| [ |
| "TestRemoveRepeatedChannel", |
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| ] |
| ], |
| [ |
| "tests/test_remove_repeated_channeld.py", |
| [ |
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| ], |
| [ |
| "tests/test_repeat_channel.py", |
| [ |
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| ] |
| ], |
| [ |
| "tests/test_repeat_channeld.py", |
| [ |
| "TestRepeatChanneld", |
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| ] |
| ], |
| [ |
| "tests/test_saliency_inferer.py", |
| [ |
| "TestSaliencyInferer", |
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| ] |
| ], |
| [ |
| "tests/test_se_block.py", |
| [ |
| "TestSEBlockLayer", |
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| ] |
| ], |
| [ |
| "tests/test_se_blocks.py", |
| [ |
| "TestChannelSELayer", |
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| ] |
| ], |
| [ |
| "tests/test_se_blocks.py", |
| [ |
| "TestResidualSELayer", |
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| ] |
| ], |
| [ |
| "tests/test_segresnet.py", |
| [ |
| "TestResNet", |
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| ] |
| ], |
| [ |
| "tests/test_segresnet_block.py", |
| [ |
| "TestResBlock", |
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| ] |
| ], |
| [ |
| "tests/test_simple_aspp.py", |
| [ |
| "TestChannelSELayer", |
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| ] |
| ], |
| [ |
| "tests/test_skip_connection.py", |
| [ |
| "TestSkipConnection", |
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| ] |
| ], |
| [ |
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| [ |
| "TestSmartCacheDataset", |
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| ] |
| ], |
| [ |
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| [ |
| "TestSpatialCrop", |
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| ] |
| ], |
| [ |
| "tests/test_spatial_cropd.py", |
| [ |
| "TestSpatialCropd", |
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| ] |
| ], |
| [ |
| "tests/test_split_channel.py", |
| [ |
| "TestSplitChannel", |
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| ] |
| ], |
| [ |
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| [ |
| "TestSplitChanneld", |
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| ] |
| ], |
| [ |
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| [ |
| "TestSqueezeDim", |
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| ] |
| ], |
| [ |
| "tests/test_squeezedimd.py", |
| [ |
| "TestSqueezeDim", |
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| ] |
| ], |
| [ |
| "tests/test_to_onehot.py", |
| [ |
| "TestToOneHot", |
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| ] |
| ], |
| [ |
| "tests/test_tversky_loss.py", |
| [ |
| "TestTverskyLoss", |
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| ] |
| ], |
| [ |
| "tests/test_unet.py", |
| [ |
| "TestUNET", |
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| ] |
| ], |
| [ |
| "tests/test_upsample_block.py", |
| [ |
| "TestUpsample", |
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| ] |
| ], |
| [ |
| "tests/test_varautoencoder.py", |
| [ |
| "TestVarAutoEncoder", |
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| ] |
| ], |
| [ |
| "tests/test_vis_cam.py", |
| [ |
| "TestClassActivationMap", |
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| ] |
| ], |
| [ |
| "tests/test_vis_gradcam.py", |
| [ |
| "TestGradientClassActivationMap", |
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| ] |
| ], |
| [ |
| "tests/test_vis_gradcampp.py", |
| [ |
| "TestGradientClassActivationMapPP", |
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| ] |
| ] |
| ], |
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| [ |
| "tests/test_add_extreme_points_channel.py", |
| [ |
| "TestAddExtremePointsChannel", |
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| ] |
| ], |
| [ |
| "tests/test_add_extreme_points_channeld.py", |
| [ |
| "TestAddExtremePointsChanneld", |
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| ] |
| ], |
| [ |
| "tests/test_adjust_contrast.py", |
| [ |
| "TestAdjustContrast", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_adjust_contrastd.py", |
| [ |
| "TestAdjustContrastd", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestFindAllValidSlicesd", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestSpatialCropForegroundd", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestAddInitialSeedPointd", |
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| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestAddGuidanceSignald", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestFindDiscrepancyRegionsd", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestAddRandomGuidanced", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestAddGuidanceFromPointsd", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestSpatialCropGuidanced", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestResizeGuidanced", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestRestoreLabeld", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
| "TestFetch2DSliced", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_flip.py", |
| [ |
| "TestFlip", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_flipd.py", |
| [ |
| "TestFlipd", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_keep_largest_connected_component.py", |
| [ |
| "TestKeepLargestConnectedComponent", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_keep_largest_connected_componentd.py", |
| [ |
| "TestKeepLargestConnectedComponentd", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_adjust_contrast.py", |
| [ |
| "TestRandAdjustContrast", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_adjust_contrastd.py", |
| [ |
| "TestRandAdjustContrastd", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_axis_flip.py", |
| [ |
| "TestRandAxisFlip", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_axis_flipd.py", |
| [ |
| "TestRandAxisFlip", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_flip.py", |
| [ |
| "TestRandFlip", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_flipd.py", |
| [ |
| "TestRandFlipd", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_gaussian_noise.py", |
| [ |
| "TestRandGaussianNoise", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_gaussian_noise.py", |
| [ |
| "TestRandGaussianNoiseTorch", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_gaussian_noised.py", |
| [ |
| "TestRandGaussianNoisedNumpy", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_gaussian_noised.py", |
| [ |
| "TestRandGaussianNoisedTorch", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_rotate.py", |
| [ |
| "TestRandRotate2D", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_rotate.py", |
| [ |
| "TestRandRotate3D", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_rotated.py", |
| [ |
| "TestRandRotated2D", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_zoom.py", |
| [ |
| "TestRandZoom", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rand_zoomd.py", |
| [ |
| "TestRandZoomd", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_resize.py", |
| [ |
| "TestResize", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_resized.py", |
| [ |
| "TestResized", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rotate.py", |
| [ |
| "TestRotate2D", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rotate.py", |
| [ |
| "TestRotate3D", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rotated.py", |
| [ |
| "TestRotated2D", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rotated.py", |
| [ |
| "TestRotated3D", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_rotated.py", |
| [ |
| "TestRotated3DXY", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_zoom.py", |
| [ |
| "TestZoom", |
| "test_correct_results" |
| ] |
| ], |
| [ |
| "tests/test_zoomd.py", |
| [ |
| "TestZoomd", |
| "test_correct_results" |
| ] |
| ] |
| ], |
| "test_adn_2d": [ |
| [ |
| "tests/test_adn.py", |
| [ |
| "TestADN2D", |
| "test_adn_2d" |
| ] |
| ] |
| ], |
| "test_no_input": [ |
| [ |
| "tests/test_adn.py", |
| [ |
| "TestADN2D", |
| "test_no_input" |
| ] |
| ] |
| ], |
| "test_adn_3d": [ |
| [ |
| "tests/test_adn.py", |
| [ |
| "TestADN3D", |
| "test_adn_3d" |
| ] |
| ] |
| ], |
| "test_affine": [ |
| [ |
| "tests/test_affine.py", |
| [ |
| "TestAffine", |
| "test_affine" |
| ] |
| ], |
| [ |
| "tests/test_affined.py", |
| [ |
| "TestAffined", |
| "test_affine" |
| ] |
| ], |
| [ |
| "tests/test_header_correct.py", |
| [ |
| "TestCorrection", |
| "test_affine" |
| ] |
| ] |
| ], |
| "test_affine_grid": [ |
| [ |
| "tests/test_affine_grid.py", |
| [ |
| "TestAffineGrid", |
| "test_affine_grid" |
| ] |
| ] |
| ], |
| "test_norm_xform": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestNormTransform", |
| "test_norm_xform" |
| ] |
| ] |
| ], |
| "test_to_norm_affine": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestToNormAffine", |
| "test_to_norm_affine" |
| ] |
| ] |
| ], |
| "test_to_norm_affine_ill": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestToNormAffine", |
| "test_to_norm_affine_ill" |
| ] |
| ] |
| ], |
| "test_affine_shift": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_affine_shift" |
| ] |
| ] |
| ], |
| "test_affine_shift_1": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_affine_shift_1" |
| ] |
| ] |
| ], |
| "test_affine_shift_2": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_affine_shift_2" |
| ] |
| ] |
| ], |
| "test_zoom": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_zoom" |
| ] |
| ] |
| ], |
| "test_zoom_1": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_zoom_1" |
| ] |
| ] |
| ], |
| "test_zoom_2": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_zoom_2" |
| ] |
| ] |
| ], |
| "test_affine_transform_minimum": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_affine_transform_minimum" |
| ] |
| ] |
| ], |
| "test_affine_transform_2d": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_affine_transform_2d" |
| ] |
| ] |
| ], |
| "test_affine_transform_3d": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_affine_transform_3d" |
| ] |
| ] |
| ], |
| "test_ill_affine_transform": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_ill_affine_transform" |
| ] |
| ] |
| ], |
| "test_forward_2d": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_forward_2d" |
| ] |
| ] |
| ], |
| "test_forward_3d": [ |
| [ |
| "tests/test_affine_transform.py", |
| [ |
| "TestAffineTransform", |
| "test_forward_3d" |
| ] |
| ] |
| ], |
| "test_fcn_shape": [ |
| [ |
| "tests/test_ahnet.py", |
| [ |
| "TestFCN", |
| "test_fcn_shape" |
| ] |
| ], |
| [ |
| "tests/test_ahnet.py", |
| [ |
| "TestFCNWithPretrain", |
| "test_fcn_shape" |
| ] |
| ] |
| ], |
| "test_mcfcn_shape": [ |
| [ |
| "tests/test_ahnet.py", |
| [ |
| "TestMCFCN", |
| "test_mcfcn_shape" |
| ] |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
| "TestStdShiftIntensityd", |
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| ] |
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| [ |
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| [ |
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| [ |
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| [ |
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| ], |
| [ |
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| [ |
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| ], |
| [ |
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| [ |
| "TestTorchVision", |
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| [ |
| "tests/test_torchvisiond.py", |
| [ |
| "TestTorchVisiond", |
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| [ |
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| [ |
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| [ |
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| [ |
| "TestVoteEnsembled", |
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| [ |
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| [ |
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| [ |
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| [ |
| "TestSkipConnection", |
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| [ |
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| [ |
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| [ |
| "tests/test_dice_ce_loss.py", |
| [ |
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| ] |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| "tests/test_compose.py", |
| [ |
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| [ |
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| [ |
| "tests/test_compose.py", |
| [ |
| "TestCompose", |
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| ] |
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| [ |
| "tests/test_compose.py", |
| [ |
| "TestCompose", |
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| ] |
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| "tests/test_compose.py", |
| [ |
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| [ |
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| [ |
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| [ |
| "tests/test_compose.py", |
| [ |
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| [ |
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| [ |
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| ] |
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| [ |
| "tests/test_compute_confusion_matrix.py", |
| [ |
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| [ |
| "tests/test_compute_confusion_matrix.py", |
| [ |
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| [ |
| "tests/test_compute_confusion_matrix.py", |
| [ |
| "TestConfusionMatrix", |
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| [ |
| "tests/test_compute_meandice.py", |
| [ |
| "TestComputeMeanDice", |
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| ], |
| [ |
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| [ |
| "TestHausdorffDistance", |
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| ] |
| ], |
| [ |
| "tests/test_surface_distance.py", |
| [ |
| "TestAllSurfaceMetrics", |
| "test_nans" |
| ] |
| ] |
| ], |
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| [ |
| "tests/test_compute_meandice.py", |
| [ |
| "TestComputeMeanDice", |
| "test_value_class" |
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| ] |
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| [ |
| "tests/test_compute_meandice.py", |
| [ |
| "TestComputeMeanDice", |
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| [ |
| "tests/test_concat_itemsd.py", |
| [ |
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| [ |
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| [ |
| "TestCopyItemsd", |
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| ] |
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| [ |
| "tests/test_concat_itemsd.py", |
| [ |
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| [ |
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| [ |
| "TestCopyItemsd", |
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| [ |
| "tests/test_concat_itemsd.py", |
| [ |
| "TestConcatItemsd", |
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| [ |
| "tests/test_concat_itemsd.py", |
| [ |
| "TestConcatItemsd", |
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| ] |
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| [ |
| "tests/test_convert_to_multi_channel.py", |
| [ |
| "TestConvertToMultiChannel", |
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| ], |
| [ |
| "tests/test_convert_to_multi_channeld.py", |
| [ |
| "TestConvertToMultiChanneld", |
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| ] |
| ], |
| [ |
| "tests/test_fg_bg_to_indices.py", |
| [ |
| "TestFgBgToIndices", |
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| ] |
| ], |
| [ |
| "tests/test_fg_bg_to_indicesd.py", |
| [ |
| "TestFgBgToIndicesd", |
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| ] |
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| [ |
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| [ |
| "TestGeneratePosNegLabelCropCenters", |
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| ] |
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| [ |
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| [ |
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| [ |
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| ] |
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| [ |
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| [ |
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| ], |
| [ |
| "tests/test_convolutions.py", |
| [ |
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| ] |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| ] |
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| [ |
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| [ |
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| ] |
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| [ |
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| [ |
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| ] |
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| [ |
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| [ |
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| ] |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| ] |
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| ], |
| [ |
| "tests/test_deepgrow_transforms.py", |
| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| ], |
| [ |
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| [ |
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| [ |
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| [ |
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| ] |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
| "TestOpenSlideReader", |
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| ], |
| [ |
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| [ |
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| [ |
| "tests/test_cuimage_reader.py", |
| [ |
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| ] |
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| [ |
| "tests/test_cuimage_reader.py", |
| [ |
| "TestCuCIMReader", |
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| ] |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| ] |
| ], |
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| [ |
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| [ |
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| ] |
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| [ |
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| [ |
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| [ |
| "TestDeleteItemsd", |
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| ], |
| [ |
| "tests/test_select_itemsd.py", |
| [ |
| "TestSelectItemsd", |
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| ] |
| ] |
| ], |
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| [ |
| "tests/test_densenet.py", |
| [ |
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| ] |
| ], |
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| [ |
| "tests/test_densenet.py", |
| [ |
| "TestPretrainedDENSENET", |
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| ] |
| ], |
| [ |
| "tests/test_senet.py", |
| [ |
| "TestPretrainedSENET", |
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| ] |
| ], |
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| [ |
| "tests/test_densenet.py", |
| [ |
| "TestDENSENET", |
| "test_densenet_shape" |
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| ] |
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| "test_value_error": [ |
| [ |
| "tests/test_detect_envelope.py", |
| [ |
| "TestDetectEnvelope", |
| "test_value_error" |
| ] |
| ] |
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| [ |
| "tests/test_detect_envelope.py", |
| [ |
| "TestHilbertTransformNoFFTMod", |
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| ] |
| ], |
| [ |
| "tests/test_hilbert_transform.py", |
| [ |
| "TestHilbertTransformNoFFTMod", |
| "test_no_fft_module_error" |
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| ] |
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| [ |
| "tests/test_detect_envelope.py", |
| [ |
| "TestDetectEnvelopeInvalidPyTorch", |
| "test_invalid_pytorch_error" |
| ] |
| ], |
| [ |
| "tests/test_hilbert_transform.py", |
| [ |
| "TestHilbertTransformInvalidPyTorch", |
| "test_invalid_pytorch_error" |
| ] |
| ] |
| ], |
| "test_result_onehot_target_include_bg": [ |
| [ |
| "tests/test_dice_focal_loss.py", |
| [ |
| "TestDiceFocalLoss", |
| "test_result_onehot_target_include_bg" |
| ] |
| ] |
| ], |
| "test_result_no_onehot_no_bg": [ |
| [ |
| "tests/test_dice_focal_loss.py", |
| [ |
| "TestDiceFocalLoss", |
| "test_result_no_onehot_no_bg" |
| ] |
| ] |
| ], |
| "test_ill_lambda": [ |
| [ |
| "tests/test_dice_focal_loss.py", |
| [ |
| "TestDiceFocalLoss", |
| "test_ill_lambda" |
| ] |
| ] |
| ], |
| "test_input_warnings": [ |
| [ |
| "tests/test_dice_loss.py", |
| [ |
| "TestDiceLoss", |
| "test_input_warnings" |
| ] |
| ], |
| [ |
| "tests/test_generalized_dice_loss.py", |
| [ |
| "TestGeneralizedDiceLoss", |
| "test_input_warnings" |
| ] |
| ], |
| [ |
| "tests/test_masked_dice_loss.py", |
| [ |
| "TestDiceLoss", |
| "test_input_warnings" |
| ] |
| ], |
| [ |
| "tests/test_tversky_loss.py", |
| [ |
| "TestTverskyLoss", |
| "test_input_warnings" |
| ] |
| ] |
| ], |
| "test_constructor": [ |
| [ |
| "tests/test_distcall.py", |
| [ |
| "DistributedCallTest", |
| "test_constructor" |
| ] |
| ] |
| ], |
| "test_even": [ |
| [ |
| "tests/test_distributed_sampler.py", |
| [ |
| "DistributedSamplerTest", |
| "test_even" |
| ] |
| ] |
| ], |
| "test_uneven": [ |
| [ |
| "tests/test_distributed_sampler.py", |
| [ |
| "DistributedSamplerTest", |
| "test_uneven" |
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| ] |
| ], |
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| [ |
| "tests/test_distributed_weighted_random_sampler.py", |
| [ |
| "DistributedWeightedRandomSamplerTest", |
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| ] |
| ] |
| ], |
| "test_num_samples": [ |
| [ |
| "tests/test_distributed_weighted_random_sampler.py", |
| [ |
| "DistributedWeightedRandomSamplerTest", |
| "test_num_samples" |
| ] |
| ] |
| ], |
| "test_actions": [ |
| [ |
| "tests/test_download_and_extract.py", |
| [ |
| "TestDownloadAndExtract", |
| "test_actions" |
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| ] |
| ], |
| "test_gradient": [ |
| [ |
| "tests/test_dvf2ddf.py", |
| [ |
| "TestDVF2DDF", |
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| ] |
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| "test_ill_arg": [ |
| [ |
| "tests/test_dynunet_block.py", |
| [ |
| "TestResBasicBlock", |
| "test_ill_arg" |
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| ], |
| [ |
| "tests/test_efficientnet.py", |
| [ |
| "TestEFFICIENTNET", |
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| [ |
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| [ |
| "TestLocalNetDownSampleBlock", |
| "test_ill_arg" |
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| ], |
| [ |
| "tests/test_localnet_block.py", |
| [ |
| "TestLocalNetUpSampleBlock", |
| "test_ill_arg" |
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| [ |
| "tests/test_localnet_block.py", |
| [ |
| "TestExtractBlock", |
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| ], |
| [ |
| "tests/test_optim_novograd.py", |
| [ |
| "TestNovograd", |
| "test_ill_arg" |
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| ], |
| [ |
| "tests/test_se_block.py", |
| [ |
| "TestSEBlockLayer", |
| "test_ill_arg" |
| ] |
| ], |
| [ |
| "tests/test_se_blocks.py", |
| [ |
| "TestChannelSELayer", |
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| [ |
| "tests/test_segresnet.py", |
| [ |
| "TestResNet", |
| "test_ill_arg" |
| ] |
| ], |
| [ |
| "tests/test_segresnet_block.py", |
| [ |
| "TestResBlock", |
| "test_ill_arg" |
| ] |
| ] |
| ], |
| "get_model_names": [ |
| [ |
| "tests/test_efficientnet.py", |
| [ |
| "get_model_names" |
| ] |
| ] |
| ], |
| "get_expected_model_shape": [ |
| [ |
| "tests/test_efficientnet.py", |
| [ |
| "get_expected_model_shape" |
| ] |
| ] |
| ], |
| "make_shape_cases": [ |
| [ |
| "tests/test_efficientnet.py", |
| [ |
| "make_shape_cases" |
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| ] |
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| [ |
| "tests/test_efficientnet.py", |
| [ |
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| "test_non_default_shapes" |
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| ] |
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| [ |
| "tests/test_efficientnet.py", |
| [ |
| "TestEFFICIENTNET", |
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| ] |
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| [ |
| "tests/test_efficientnet.py", |
| [ |
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| [ |
| "tests/test_efficientnet.py", |
| [ |
| "TestEFFICIENTNET", |
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| [ |
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| [ |
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| [ |
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| ], |
| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
| "TestHandlerSmartCache", |
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| [ |
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| [ |
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| [ |
| "tests/test_write_metrics_reports.py", |
| [ |
| "TestWriteMetricsReports", |
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| ] |
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| [ |
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| [ |
| "tests/test_ensure_channel_firstd.py", |
| [ |
| "TestEnsureChannelFirstd", |
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| [ |
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| [ |
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| [ |
| "TestLoadImage", |
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| ] |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| [ |
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| "test_cls_values" |
| ] |
| ] |
| ], |
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| [ |
| "tests/test_load_decathlon_datalist.py", |
| [ |
| "TestLoadDecathlonDatalist", |
| "test_seg_no_basedir" |
| ] |
| ] |
| ], |
| "test_seg_no_labels": [ |
| [ |
| "tests/test_load_decathlon_datalist.py", |
| [ |
| "TestLoadDecathlonDatalist", |
| "test_seg_no_labels" |
| ] |
| ] |
| ], |
| "test_additional_items": [ |
| [ |
| "tests/test_load_decathlon_datalist.py", |
| [ |
| "TestLoadDecathlonDatalist", |
| "test_additional_items" |
| ] |
| ] |
| ], |
| "test_nibabel_reader": [ |
| [ |
| "tests/test_load_image.py", |
| [ |
| "TestLoadImage", |
| "test_nibabel_reader" |
| ] |
| ] |
| ], |
| "test_itk_reader": [ |
| [ |
| "tests/test_load_image.py", |
| [ |
| "TestLoadImage", |
| "test_itk_reader" |
| ] |
| ] |
| ], |
| "test_itk_reader_multichannel": [ |
| [ |
| "tests/test_load_image.py", |
| [ |
| "TestLoadImage", |
| "test_itk_reader_multichannel" |
| ] |
| ] |
| ], |
| "test_register": [ |
| [ |
| "tests/test_load_image.py", |
| [ |
| "TestLoadImage", |
| "test_register" |
| ] |
| ], |
| [ |
| "tests/test_load_imaged.py", |
| [ |
| "TestLoadImaged", |
| "test_register" |
| ] |
| ] |
| ], |
| "test_kwargs": [ |
| [ |
| "tests/test_load_image.py", |
| [ |
| "TestLoadImage", |
| "test_kwargs" |
| ] |
| ], |
| [ |
| "tests/test_numpy_reader.py", |
| [ |
| "TestNumpyReader", |
| "test_kwargs" |
| ] |
| ] |
| ], |
| "test_load_spacingd": [ |
| [ |
| "tests/test_load_spacing_orientation.py", |
| [ |
| "TestLoadSpacingOrientation", |
| "test_load_spacingd" |
| ] |
| ] |
| ], |
| "test_load_spacingd_rotate": [ |
| [ |
| "tests/test_load_spacing_orientation.py", |
| [ |
| "TestLoadSpacingOrientation", |
| "test_load_spacingd_rotate" |
| ] |
| ] |
| ], |
| "test_load_spacingd_non_diag": [ |
| [ |
| "tests/test_load_spacing_orientation.py", |
| [ |
| "TestLoadSpacingOrientation", |
| "test_load_spacingd_non_diag" |
| ] |
| ] |
| ], |
| "test_load_spacingd_rotate_non_diag": [ |
| [ |
| "tests/test_load_spacing_orientation.py", |
| [ |
| "TestLoadSpacingOrientation", |
| "test_load_spacingd_rotate_non_diag" |
| ] |
| ] |
| ], |
| "test_load_spacingd_rotate_non_diag_ornt": [ |
| [ |
| "tests/test_load_spacing_orientation.py", |
| [ |
| "TestLoadSpacingOrientation", |
| "test_load_spacingd_rotate_non_diag_ornt" |
| ] |
| ] |
| ], |
| "test_load_spacingd_non_diag_ornt": [ |
| [ |
| "tests/test_load_spacing_orientation.py", |
| [ |
| "TestLoadSpacingOrientation", |
| "test_load_spacingd_non_diag_ornt" |
| ] |
| ] |
| ], |
| "test_lr_finder": [ |
| [ |
| "tests/test_lr_finder.py", |
| [ |
| "TestLRFinder", |
| "test_lr_finder" |
| ] |
| ] |
| ], |
| "test_keys": [ |
| [ |
| "tests/test_map_transform.py", |
| [ |
| "TestRandomizable", |
| "test_keys" |
| ] |
| ] |
| ], |
| "test_wrong_keys": [ |
| [ |
| "tests/test_map_transform.py", |
| [ |
| "TestRandomizable", |
| "test_wrong_keys" |
| ] |
| ] |
| ], |
| "prepare_data": [ |
| [ |
| "tests/test_masked_inference_wsi_dataset.py", |
| [ |
| "prepare_data" |
| ] |
| ] |
| ], |
| "test_read_patches_openslide": [ |
| [ |
| "tests/test_masked_inference_wsi_dataset.py", |
| [ |
| "TestMaskedInferenceWSIDataset", |
| "test_read_patches_openslide" |
| ] |
| ], |
| [ |
| "tests/test_patch_wsi_dataset.py", |
| [ |
| "TestPatchWSIDataset", |
| "test_read_patches_openslide" |
| ] |
| ] |
| ], |
| "compare_samples_expected": [ |
| [ |
| "tests/test_masked_inference_wsi_dataset.py", |
| [ |
| "TestMaskedInferenceWSIDataset", |
| "compare_samples_expected" |
| ] |
| ] |
| ], |
| "test_cuda_value": [ |
| [ |
| "tests/test_mean_ensemble.py", |
| [ |
| "TestMeanEnsemble", |
| "test_cuda_value" |
| ] |
| ], |
| [ |
| "tests/test_mean_ensembled.py", |
| [ |
| "TestMeanEnsembled", |
| "test_cuda_value" |
| ] |
| ], |
| [ |
| "tests/test_vote_ensemble.py", |
| [ |
| "TestVoteEnsemble", |
| "test_cuda_value" |
| ] |
| ], |
| [ |
| "tests/test_vote_ensembled.py", |
| [ |
| "TestVoteEnsembled", |
| "test_cuda_value" |
| ] |
| ] |
| ], |
| "test_public_api": [ |
| [ |
| "tests/test_module_list.py", |
| [ |
| "TestAllImport", |
| "test_public_api" |
| ] |
| ] |
| ], |
| "test_endianness": [ |
| [ |
| "tests/test_nifti_endianness.py", |
| [ |
| "TestNiftiEndianness", |
| "test_endianness" |
| ] |
| ] |
| ], |
| "test_switch": [ |
| [ |
| "tests/test_nifti_endianness.py", |
| [ |
| "TestNiftiEndianness", |
| "test_switch" |
| ] |
| ] |
| ], |
| "test_pil": [ |
| [ |
| "tests/test_nifti_endianness.py", |
| [ |
| "TestNiftiEndianness", |
| "test_pil" |
| ] |
| ] |
| ], |
| "test_revise_q": [ |
| [ |
| "tests/test_nifti_header_revise.py", |
| [ |
| "TestRectifyHeaderSformQform", |
| "test_revise_q" |
| ] |
| ] |
| ], |
| "test_revise_both": [ |
| [ |
| "tests/test_nifti_header_revise.py", |
| [ |
| "TestRectifyHeaderSformQform", |
| "test_revise_both" |
| ] |
| ] |
| ], |
| "test_orientation": [ |
| [ |
| "tests/test_nifti_rw.py", |
| [ |
| "TestNiftiLoadRead", |
| "test_orientation" |
| ] |
| ] |
| ], |
| "test_consistency": [ |
| [ |
| "tests/test_nifti_rw.py", |
| [ |
| "TestNiftiLoadRead", |
| "test_consistency" |
| ] |
| ] |
| ], |
| "test_write_2d": [ |
| [ |
| "tests/test_nifti_rw.py", |
| [ |
| "TestNiftiLoadRead", |
| "test_write_2d" |
| ] |
| ] |
| ], |
| "test_write_3d": [ |
| [ |
| "tests/test_nifti_rw.py", |
| [ |
| "TestNiftiLoadRead", |
| "test_write_3d" |
| ] |
| ] |
| ], |
| "test_write_4d": [ |
| [ |
| "tests/test_nifti_rw.py", |
| [ |
| "TestNiftiLoadRead", |
| "test_write_4d" |
| ] |
| ] |
| ], |
| "test_write_5d": [ |
| [ |
| "tests/test_nifti_rw.py", |
| [ |
| "TestNiftiLoadRead", |
| "test_write_5d" |
| ] |
| ] |
| ], |
| "test_saved_resize_content": [ |
| [ |
| "tests/test_nifti_saver.py", |
| [ |
| "TestNiftiSaver", |
| "test_saved_resize_content" |
| ] |
| ] |
| ], |
| "test_saved_3d_resize_content": [ |
| [ |
| "tests/test_nifti_saver.py", |
| [ |
| "TestNiftiSaver", |
| "test_saved_3d_resize_content" |
| ] |
| ] |
| ], |
| "test_squeeze_end_dims": [ |
| [ |
| "tests/test_nifti_saver.py", |
| [ |
| "TestNiftiSaver", |
| "test_squeeze_end_dims" |
| ] |
| ] |
| ], |
| "test_nonzero": [ |
| [ |
| "tests/test_normalize_intensity.py", |
| [ |
| "TestNormalizeIntensity", |
| "test_nonzero" |
| ] |
| ], |
| [ |
| "tests/test_normalize_intensityd.py", |
| [ |
| "TestNormalizeIntensityd", |
| "test_nonzero" |
| ] |
| ], |
| [ |
| "tests/test_std_shift_intensity.py", |
| [ |
| "TestStdShiftIntensity", |
| "test_nonzero" |
| ] |
| ], |
| [ |
| "tests/test_std_shift_intensityd.py", |
| [ |
| "TestStdShiftIntensityd", |
| "test_nonzero" |
| ] |
| ] |
| ], |
| "test_channel_wise": [ |
| [ |
| "tests/test_normalize_intensity.py", |
| [ |
| "TestNormalizeIntensity", |
| "test_channel_wise" |
| ] |
| ], |
| [ |
| "tests/test_normalize_intensityd.py", |
| [ |
| "TestNormalizeIntensityd", |
| "test_channel_wise" |
| ] |
| ], |
| [ |
| "tests/test_std_shift_intensity.py", |
| [ |
| "TestStdShiftIntensity", |
| "test_channel_wise" |
| ] |
| ], |
| [ |
| "tests/test_std_shift_intensityd.py", |
| [ |
| "TestStdShiftIntensityd", |
| "test_channel_wise" |
| ] |
| ] |
| ], |
| "test_value_errors": [ |
| [ |
| "tests/test_normalize_intensity.py", |
| [ |
| "TestNormalizeIntensity", |
| "test_value_errors" |
| ] |
| ] |
| ], |
| "test_image_normalize_intensityd": [ |
| [ |
| "tests/test_normalize_intensityd.py", |
| [ |
| "TestNormalizeIntensityd", |
| "test_image_normalize_intensityd" |
| ] |
| ] |
| ], |
| "test_load_stream": [ |
| [ |
| "tests/test_npzdictitemdataset.py", |
| [ |
| "TestNPZDictItemDataset", |
| "test_load_stream" |
| ] |
| ] |
| ], |
| "test_load_file": [ |
| [ |
| "tests/test_npzdictitemdataset.py", |
| [ |
| "TestNPZDictItemDataset", |
| "test_load_file" |
| ] |
| ] |
| ], |
| "test_npy": [ |
| [ |
| "tests/test_numpy_reader.py", |
| [ |
| "TestNumpyReader", |
| "test_npy" |
| ] |
| ] |
| ], |
| "test_npz1": [ |
| [ |
| "tests/test_numpy_reader.py", |
| [ |
| "TestNumpyReader", |
| "test_npz1" |
| ] |
| ] |
| ], |
| "test_npz2": [ |
| [ |
| "tests/test_numpy_reader.py", |
| [ |
| "TestNumpyReader", |
| "test_npz2" |
| ] |
| ] |
| ], |
| "test_npz3": [ |
| [ |
| "tests/test_numpy_reader.py", |
| [ |
| "TestNumpyReader", |
| "test_npz3" |
| ] |
| ] |
| ], |
| "test_npy_pickle": [ |
| [ |
| "tests/test_numpy_reader.py", |
| [ |
| "TestNumpyReader", |
| "test_npy_pickle" |
| ] |
| ] |
| ], |
| "build_test_cases": [ |
| [ |
| "tests/test_optim_novograd.py", |
| [ |
| "build_test_cases" |
| ] |
| ] |
| ], |
| "fn": [ |
| [ |
| "tests/test_optim_novograd.py", |
| [ |
| "TestNovograd", |
| "test_step", |
| "fn" |
| ] |
| ] |
| ], |
| "test_step": [ |
| [ |
| "tests/test_optim_novograd.py", |
| [ |
| "TestNovograd", |
| "test_step" |
| ] |
| ] |
| ], |
| "test_import_valid": [ |
| [ |
| "tests/test_optional_import.py", |
| [ |
| "TestOptionalImport", |
| "test_import_valid" |
| ] |
| ] |
| ], |
| "test_import_wrong_number": [ |
| [ |
| "tests/test_optional_import.py", |
| [ |
| "TestOptionalImport", |
| "test_import_wrong_number" |
| ] |
| ] |
| ], |
| "test_import_good_number": [ |
| [ |
| "tests/test_optional_import.py", |
| [ |
| "TestOptionalImport", |
| "test_import_good_number" |
| ] |
| ] |
| ], |
| "test_import_exact": [ |
| [ |
| "tests/test_optional_import.py", |
| [ |
| "TestOptionalImport", |
| "test_import_exact" |
| ] |
| ] |
| ], |
| "test_import_method": [ |
| [ |
| "tests/test_optional_import.py", |
| [ |
| "TestOptionalImport", |
| "test_import_method" |
| ] |
| ] |
| ], |
| "versioning": [ |
| [ |
| "tests/test_optional_import.py", |
| [ |
| "TestOptionalImport", |
| "test_additional", |
| "versioning" |
| ] |
| ] |
| ], |
| "test_additional": [ |
| [ |
| "tests/test_optional_import.py", |
| [ |
| "TestOptionalImport", |
| "test_additional" |
| ] |
| ] |
| ], |
| "test_ornt": [ |
| [ |
| "tests/test_orientation.py", |
| [ |
| "TestOrientationCase", |
| "test_ornt" |
| ] |
| ] |
| ], |
| "test_bad_params": [ |
| [ |
| "tests/test_orientation.py", |
| [ |
| "TestOrientationCase", |
| "test_bad_params" |
| ] |
| ] |
| ], |
| "test_orntd": [ |
| [ |
| "tests/test_orientationd.py", |
| [ |
| "TestOrientationdCase", |
| "test_orntd" |
| ] |
| ] |
| ], |
| "test_orntd_3d": [ |
| [ |
| "tests/test_orientationd.py", |
| [ |
| "TestOrientationdCase", |
| "test_orntd_3d" |
| ] |
| ] |
| ], |
| "test_orntd_2d": [ |
| [ |
| "tests/test_orientationd.py", |
| [ |
| "TestOrientationdCase", |
| "test_orntd_2d" |
| ] |
| ] |
| ], |
| "test_orntd_1d": [ |
| [ |
| "tests/test_orientationd.py", |
| [ |
| "TestOrientationdCase", |
| "test_orntd_1d" |
| ] |
| ] |
| ], |
| "test_orntd_canonical": [ |
| [ |
| "tests/test_orientationd.py", |
| [ |
| "TestOrientationdCase", |
| "test_orntd_canonical" |
| ] |
| ] |
| ], |
| "test_pad_collation": [ |
| [ |
| "tests/test_pad_collation.py", |
| [ |
| "TestPadCollation", |
| "test_pad_collation" |
| ] |
| ] |
| ], |
| "fake_loss": [ |
| [ |
| "tests/test_parallel_execution.py", |
| [ |
| "fake_loss" |
| ] |
| ] |
| ], |
| "fake_data_stream": [ |
| [ |
| "tests/test_parallel_execution.py", |
| [ |
| "fake_data_stream" |
| ] |
| ] |
| ], |
| "test_single_gpu": [ |
| [ |
| "tests/test_parallel_execution.py", |
| [ |
| "TestParallelExecution", |
| "test_single_gpu" |
| ] |
| ] |
| ], |
| "test_multi_gpu": [ |
| [ |
| "tests/test_parallel_execution.py", |
| [ |
| "TestParallelExecution", |
| "test_multi_gpu" |
| ] |
| ] |
| ], |
| "test_cpu": [ |
| [ |
| "tests/test_parallel_execution.py", |
| [ |
| "TestParallelExecution", |
| "test_cpu" |
| ] |
| ], |
| [ |
| "tests/test_phl_cpu.py", |
| [ |
| "PHLFilterTestCaseCpu", |
| "test_cpu" |
| ] |
| ] |
| ], |
| "identity": [ |
| [ |
| "tests/test_patch_dataset.py", |
| [ |
| "identity" |
| ] |
| ] |
| ], |
| "test_output": [ |
| [ |
| "tests/test_pathology_prob_nms.py", |
| [ |
| "TestPathologyProbNMS", |
| "test_output" |
| ] |
| ], |
| [ |
| "tests/test_probnms.py", |
| [ |
| "TestProbNMS", |
| "test_output" |
| ] |
| ], |
| [ |
| "tests/test_probnmsd.py", |
| [ |
| "TestProbNMS", |
| "test_output" |
| ] |
| ] |
| ], |
| "test_cuda": [ |
| [ |
| "tests/test_phl_cuda.py", |
| [ |
| "PHLFilterTestCaseCuda", |
| "test_cuda" |
| ] |
| ] |
| ], |
| "test_shape_value": [ |
| [ |
| "tests/test_pil_reader.py", |
| [ |
| "TestPNGReader", |
| "test_shape_value" |
| ] |
| ] |
| ], |
| "test_converter": [ |
| [ |
| "tests/test_pil_reader.py", |
| [ |
| "TestPNGReader", |
| "test_converter" |
| ] |
| ] |
| ], |
| "test_write_gray_1height": [ |
| [ |
| "tests/test_png_rw.py", |
| [ |
| "TestPngWrite", |
| "test_write_gray_1height" |
| ] |
| ] |
| ], |
| "test_write_gray_1channel": [ |
| [ |
| "tests/test_png_rw.py", |
| [ |
| "TestPngWrite", |
| "test_write_gray_1channel" |
| ] |
| ] |
| ], |
| "test_write_rgb": [ |
| [ |
| "tests/test_png_rw.py", |
| [ |
| "TestPngWrite", |
| "test_write_rgb" |
| ] |
| ] |
| ], |
| "test_write_2channels": [ |
| [ |
| "tests/test_png_rw.py", |
| [ |
| "TestPngWrite", |
| "test_write_2channels" |
| ] |
| ] |
| ], |
| "test_write_output_shape": [ |
| [ |
| "tests/test_png_rw.py", |
| [ |
| "TestPngWrite", |
| "test_write_output_shape" |
| ] |
| ] |
| ], |
| "test_saved_content_three_channel": [ |
| [ |
| "tests/test_png_saver.py", |
| [ |
| "TestPNGSaver", |
| "test_saved_content_three_channel" |
| ] |
| ] |
| ], |
| "test_saved_content_spatial_size": [ |
| [ |
| "tests/test_png_saver.py", |
| [ |
| "TestPNGSaver", |
| "test_saved_content_spatial_size" |
| ] |
| ] |
| ], |
| "test_saved_specified_root": [ |
| [ |
| "tests/test_png_saver.py", |
| [ |
| "TestPNGSaver", |
| "test_saved_specified_root" |
| ] |
| ] |
| ], |
| "test_floats": [ |
| [ |
| "tests/test_polyval.py", |
| [ |
| "TestPolyval", |
| "test_floats" |
| ] |
| ] |
| ], |
| "test_gpu": [ |
| [ |
| "tests/test_polyval.py", |
| [ |
| "TestPolyval", |
| "test_gpu" |
| ] |
| ] |
| ], |
| "test_print_info": [ |
| [ |
| "tests/test_print_info.py", |
| [ |
| "TestPrintInfo", |
| "test_print_info" |
| ] |
| ] |
| ], |
| "test_output_str": [ |
| [ |
| "tests/test_query_memory.py", |
| [ |
| "TestQueryMemory", |
| "test_output_str" |
| ] |
| ] |
| ], |
| "test_rand_affine": [ |
| [ |
| "tests/test_rand_affine.py", |
| [ |
| "TestRandAffine", |
| "test_rand_affine" |
| ] |
| ] |
| ], |
| "test_rand_affine_grid": [ |
| [ |
| "tests/test_rand_affine_grid.py", |
| [ |
| "TestRandAffineGrid", |
| "test_rand_affine_grid" |
| ] |
| ] |
| ], |
| "test_rand_affined": [ |
| [ |
| "tests/test_rand_affined.py", |
| [ |
| "TestRandAffined", |
| "test_rand_affined" |
| ] |
| ] |
| ], |
| "test_rand_deform_grid": [ |
| [ |
| "tests/test_rand_deform_grid.py", |
| [ |
| "TestRandDeformGrid", |
| "test_rand_deform_grid" |
| ] |
| ] |
| ], |
| "test_rand_2d_elastic": [ |
| [ |
| "tests/test_rand_elastic_2d.py", |
| [ |
| "TestRand2DElastic", |
| "test_rand_2d_elastic" |
| ] |
| ] |
| ], |
| "test_rand_3d_elastic": [ |
| [ |
| "tests/test_rand_elastic_3d.py", |
| [ |
| "TestRand3DElastic", |
| "test_rand_3d_elastic" |
| ] |
| ] |
| ], |
| "test_rand_2d_elasticd": [ |
| [ |
| "tests/test_rand_elasticd_2d.py", |
| [ |
| "TestRand2DElasticd", |
| "test_rand_2d_elasticd" |
| ] |
| ] |
| ], |
| "test_rand_3d_elasticd": [ |
| [ |
| "tests/test_rand_elasticd_3d.py", |
| [ |
| "TestRand3DElasticd", |
| "test_rand_3d_elasticd" |
| ] |
| ] |
| ], |
| "test_numpy_or_torch": [ |
| [ |
| "tests/test_rand_gaussian_noised.py", |
| [ |
| "test_numpy_or_torch" |
| ] |
| ] |
| ], |
| "test_rand_histogram_shift": [ |
| [ |
| "tests/test_rand_histogram_shift.py", |
| [ |
| "TestRandHistogramShift", |
| "test_rand_histogram_shift" |
| ] |
| ] |
| ], |
| "test_rand_histogram_shiftd": [ |
| [ |
| "tests/test_rand_histogram_shiftd.py", |
| [ |
| "TestRandHistogramShiftD", |
| "test_rand_histogram_shiftd" |
| ] |
| ] |
| ], |
| "test_rand_lambdad_identity": [ |
| [ |
| "tests/test_rand_lambdad.py", |
| [ |
| "TestRandLambdad", |
| "test_rand_lambdad_identity" |
| ] |
| ] |
| ], |
| "test_k": [ |
| [ |
| "tests/test_rand_rotate90.py", |
| [ |
| "TestRandRotate90", |
| "test_k" |
| ] |
| ], |
| [ |
| "tests/test_rand_rotate90d.py", |
| [ |
| "TestRandRotate90d", |
| "test_k" |
| ] |
| ], |
| [ |
| "tests/test_rotate90.py", |
| [ |
| "TestRotate90", |
| "test_k" |
| ] |
| ], |
| [ |
| "tests/test_rotate90d.py", |
| [ |
| "TestRotate90d", |
| "test_k" |
| ] |
| ] |
| ], |
| "test_spatial_axes": [ |
| [ |
| "tests/test_rand_rotate90.py", |
| [ |
| "TestRandRotate90", |
| "test_spatial_axes" |
| ] |
| ], |
| [ |
| "tests/test_rand_rotate90d.py", |
| [ |
| "TestRandRotate90d", |
| "test_spatial_axes" |
| ] |
| ], |
| [ |
| "tests/test_rotate90.py", |
| [ |
| "TestRotate90", |
| "test_spatial_axes" |
| ] |
| ], |
| [ |
| "tests/test_rotate90d.py", |
| [ |
| "TestRotate90d", |
| "test_spatial_axes" |
| ] |
| ] |
| ], |
| "test_prob_k_spatial_axes": [ |
| [ |
| "tests/test_rand_rotate90.py", |
| [ |
| "TestRandRotate90", |
| "test_prob_k_spatial_axes" |
| ] |
| ], |
| [ |
| "tests/test_rand_rotate90d.py", |
| [ |
| "TestRandRotate90d", |
| "test_prob_k_spatial_axes" |
| ] |
| ], |
| [ |
| "tests/test_rotate90.py", |
| [ |
| "TestRotate90", |
| "test_prob_k_spatial_axes" |
| ] |
| ], |
| [ |
| "tests/test_rotate90d.py", |
| [ |
| "TestRotate90d", |
| "test_prob_k_spatial_axes" |
| ] |
| ] |
| ], |
| "test_no_key": [ |
| [ |
| "tests/test_rand_rotate90d.py", |
| [ |
| "TestRandRotate90d", |
| "test_no_key" |
| ] |
| ], |
| [ |
| "tests/test_rotate90d.py", |
| [ |
| "TestRotate90d", |
| "test_no_key" |
| ] |
| ] |
| ], |
| "test_correct_shapes": [ |
| [ |
| "tests/test_rand_rotated.py", |
| [ |
| "TestRandRotated3D", |
| "test_correct_shapes" |
| ] |
| ] |
| ], |
| "test_rand_weighted_crop_small_roi": [ |
| [ |
| "tests/test_rand_weighted_crop.py", |
| [ |
| "TestRandWeightedCrop2D", |
| "test_rand_weighted_crop_small_roi" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_crop.py", |
| [ |
| "TestRandWeightedCrop", |
| "test_rand_weighted_crop_small_roi" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_cropd.py", |
| [ |
| "TestRandWeightedCrop", |
| "test_rand_weighted_crop_small_roi" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_cropd.py", |
| [ |
| "TestRandWeightedCrop3D", |
| "test_rand_weighted_crop_small_roi" |
| ] |
| ] |
| ], |
| "test_rand_weighted_crop_default_roi": [ |
| [ |
| "tests/test_rand_weighted_crop.py", |
| [ |
| "TestRandWeightedCrop2D", |
| "test_rand_weighted_crop_default_roi" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_crop.py", |
| [ |
| "TestRandWeightedCrop", |
| "test_rand_weighted_crop_default_roi" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_cropd.py", |
| [ |
| "TestRandWeightedCrop", |
| "test_rand_weighted_crop_default_roi" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_cropd.py", |
| [ |
| "TestRandWeightedCrop3D", |
| "test_rand_weighted_crop_default_roi" |
| ] |
| ] |
| ], |
| "test_rand_weighted_crop_large_roi": [ |
| [ |
| "tests/test_rand_weighted_crop.py", |
| [ |
| "TestRandWeightedCrop2D", |
| "test_rand_weighted_crop_large_roi" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_crop.py", |
| [ |
| "TestRandWeightedCrop", |
| "test_rand_weighted_crop_large_roi" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_cropd.py", |
| [ |
| "TestRandWeightedCrop", |
| "test_rand_weighted_crop_large_roi" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_cropd.py", |
| [ |
| "TestRandWeightedCrop3D", |
| "test_rand_weighted_crop_large_roi" |
| ] |
| ] |
| ], |
| "test_rand_weighted_crop_bad_w": [ |
| [ |
| "tests/test_rand_weighted_crop.py", |
| [ |
| "TestRandWeightedCrop2D", |
| "test_rand_weighted_crop_bad_w" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_crop.py", |
| [ |
| "TestRandWeightedCrop", |
| "test_rand_weighted_crop_bad_w" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_cropd.py", |
| [ |
| "TestRandWeightedCrop", |
| "test_rand_weighted_crop_bad_w" |
| ] |
| ], |
| [ |
| "tests/test_rand_weighted_cropd.py", |
| [ |
| "TestRandWeightedCrop3D", |
| "test_rand_weighted_crop_bad_w" |
| ] |
| ] |
| ], |
| "test_keep_size": [ |
| [ |
| "tests/test_rand_zoom.py", |
| [ |
| "TestRandZoom", |
| "test_keep_size" |
| ] |
| ], |
| [ |
| "tests/test_rand_zoomd.py", |
| [ |
| "TestRandZoomd", |
| "test_keep_size" |
| ] |
| ], |
| [ |
| "tests/test_zoom.py", |
| [ |
| "TestZoom", |
| "test_keep_size" |
| ] |
| ], |
| [ |
| "tests/test_zoomd.py", |
| [ |
| "TestZoomd", |
| "test_keep_size" |
| ] |
| ] |
| ], |
| "test_auto_expand_3d": [ |
| [ |
| "tests/test_rand_zoom.py", |
| [ |
| "TestRandZoom", |
| "test_auto_expand_3d" |
| ] |
| ], |
| [ |
| "tests/test_rand_zoomd.py", |
| [ |
| "TestRandZoomd", |
| "test_auto_expand_3d" |
| ] |
| ] |
| ], |
| "test_output_shape": [ |
| [ |
| "tests/test_random_bias_field.py", |
| [ |
| "TestRandBiasField", |
| "test_output_shape" |
| ] |
| ], |
| [ |
| "tests/test_random_bias_fieldd.py", |
| [ |
| "TestRandBiasFieldd", |
| "test_output_shape" |
| ] |
| ] |
| ], |
| "test_zero_range": [ |
| [ |
| "tests/test_random_bias_field.py", |
| [ |
| "TestRandBiasField", |
| "test_zero_range" |
| ] |
| ], |
| [ |
| "tests/test_random_bias_fieldd.py", |
| [ |
| "TestRandBiasFieldd", |
| "test_zero_range" |
| ] |
| ] |
| ], |
| "test_one_range_input": [ |
| [ |
| "tests/test_random_bias_field.py", |
| [ |
| "TestRandBiasField", |
| "test_one_range_input" |
| ] |
| ], |
| [ |
| "tests/test_random_bias_fieldd.py", |
| [ |
| "TestRandBiasFieldd", |
| "test_one_range_input" |
| ] |
| ] |
| ], |
| "test_zero_prob": [ |
| [ |
| "tests/test_random_bias_field.py", |
| [ |
| "TestRandBiasField", |
| "test_zero_prob" |
| ] |
| ], |
| [ |
| "tests/test_random_bias_fieldd.py", |
| [ |
| "TestRandBiasFieldd", |
| "test_zero_prob" |
| ] |
| ] |
| ], |
| "test_seed": [ |
| [ |
| "tests/test_randomizable.py", |
| [ |
| "TestRandomizable", |
| "test_seed" |
| ] |
| ] |
| ], |
| "test_state": [ |
| [ |
| "tests/test_randomizable.py", |
| [ |
| "TestRandomizable", |
| "test_state" |
| ] |
| ] |
| ], |
| "test_resample": [ |
| [ |
| "tests/test_resampler.py", |
| [ |
| "TestResample", |
| "test_resample" |
| ] |
| ], |
| [ |
| "tests/test_warp.py", |
| [ |
| "TestWarp", |
| "test_resample" |
| ] |
| ] |
| ], |
| "test_correct_shape": [ |
| [ |
| "tests/test_rotate.py", |
| [ |
| "TestRotate3D", |
| "test_correct_shape" |
| ] |
| ] |
| ], |
| "test_ill_case": [ |
| [ |
| "tests/test_rotate.py", |
| [ |
| "TestRotate3D", |
| "test_ill_case" |
| ] |
| ] |
| ], |
| "test_rotate90_default": [ |
| [ |
| "tests/test_rotate90.py", |
| [ |
| "TestRotate90", |
| "test_rotate90_default" |
| ] |
| ], |
| [ |
| "tests/test_rotate90d.py", |
| [ |
| "TestRotate90d", |
| "test_rotate90_default" |
| ] |
| ] |
| ], |
| "test_range_scale": [ |
| [ |
| "tests/test_scale_intensity.py", |
| [ |
| "TestScaleIntensity", |
| "test_range_scale" |
| ] |
| ], |
| [ |
| "tests/test_scale_intensityd.py", |
| [ |
| "TestScaleIntensityd", |
| "test_range_scale" |
| ] |
| ] |
| ], |
| "test_factor_scale": [ |
| [ |
| "tests/test_scale_intensity.py", |
| [ |
| "TestScaleIntensity", |
| "test_factor_scale" |
| ] |
| ], |
| [ |
| "tests/test_scale_intensityd.py", |
| [ |
| "TestScaleIntensityd", |
| "test_factor_scale" |
| ] |
| ] |
| ], |
| "test_image_scale_intensity_range": [ |
| [ |
| "tests/test_scale_intensity_range.py", |
| [ |
| "IntensityScaleIntensityRange", |
| "test_image_scale_intensity_range" |
| ] |
| ] |
| ], |
| "test_scaling": [ |
| [ |
| "tests/test_scale_intensity_range_percentiles.py", |
| [ |
| "TestScaleIntensityRangePercentiles", |
| "test_scaling" |
| ] |
| ], |
| [ |
| "tests/test_scale_intensity_range_percentilesd.py", |
| [ |
| "TestScaleIntensityRangePercentilesd", |
| "test_scaling" |
| ] |
| ] |
| ], |
| "test_relative_scaling": [ |
| [ |
| "tests/test_scale_intensity_range_percentiles.py", |
| [ |
| "TestScaleIntensityRangePercentiles", |
| "test_relative_scaling" |
| ] |
| ], |
| [ |
| "tests/test_scale_intensity_range_percentilesd.py", |
| [ |
| "TestScaleIntensityRangePercentilesd", |
| "test_relative_scaling" |
| ] |
| ] |
| ], |
| "test_invalid_instantiation": [ |
| [ |
| "tests/test_scale_intensity_range_percentiles.py", |
| [ |
| "TestScaleIntensityRangePercentiles", |
| "test_invalid_instantiation" |
| ] |
| ], |
| [ |
| "tests/test_scale_intensity_range_percentilesd.py", |
| [ |
| "TestScaleIntensityRangePercentilesd", |
| "test_invalid_instantiation" |
| ] |
| ] |
| ], |
| "test_image_scale_intensity_ranged": [ |
| [ |
| "tests/test_scale_intensity_ranged.py", |
| [ |
| "IntensityScaleIntensityRanged", |
| "test_image_scale_intensity_ranged" |
| ] |
| ] |
| ], |
| "test_vae_shape": [ |
| [ |
| "tests/test_segresnet.py", |
| [ |
| "TestResNetVAE", |
| "test_vae_shape" |
| ] |
| ] |
| ], |
| "test_senet_shape": [ |
| [ |
| "tests/test_senet.py", |
| [ |
| "TestSENET", |
| "test_senet_shape" |
| ] |
| ], |
| [ |
| "tests/test_senet.py", |
| [ |
| "TestPretrainedSENET", |
| "test_senet_shape" |
| ] |
| ] |
| ], |
| "test_ill_args": [ |
| [ |
| "tests/test_simple_aspp.py", |
| [ |
| "TestChannelSELayer", |
| "test_ill_args" |
| ] |
| ] |
| ], |
| "test_sliding_window_default": [ |
| [ |
| "tests/test_sliding_window_inference.py", |
| [ |
| "TestSlidingWindowInference", |
| "test_sliding_window_default" |
| ] |
| ] |
| ], |
| "test_default_device": [ |
| [ |
| "tests/test_sliding_window_inference.py", |
| [ |
| "TestSlidingWindowInference", |
| "test_default_device" |
| ] |
| ] |
| ], |
| "test_sw_device": [ |
| [ |
| "tests/test_sliding_window_inference.py", |
| [ |
| "TestSlidingWindowInference", |
| "test_sw_device" |
| ] |
| ] |
| ], |
| "test_sigma": [ |
| [ |
| "tests/test_sliding_window_inference.py", |
| [ |
| "TestSlidingWindowInference", |
| "test_sigma" |
| ] |
| ] |
| ], |
| "test_cval": [ |
| [ |
| "tests/test_sliding_window_inference.py", |
| [ |
| "TestSlidingWindowInference", |
| "test_cval" |
| ] |
| ] |
| ], |
| "test_args_kwargs": [ |
| [ |
| "tests/test_sliding_window_inference.py", |
| [ |
| "TestSlidingWindowInference", |
| "test_args_kwargs" |
| ] |
| ] |
| ], |
| "assert_samples_expected": [ |
| [ |
| "tests/test_smartcache_patch_wsi_dataset.py", |
| [ |
| "TestSmartCachePatchWSIDataset", |
| "assert_samples_expected" |
| ] |
| ] |
| ], |
| "test_shuffle": [ |
| [ |
| "tests/test_smartcachedataset.py", |
| [ |
| "TestSmartCacheDataset", |
| "test_shuffle" |
| ] |
| ] |
| ], |
| "test_spacing": [ |
| [ |
| "tests/test_spacing.py", |
| [ |
| "TestSpacingCase", |
| "test_spacing" |
| ] |
| ] |
| ], |
| "test_ill_pixdim": [ |
| [ |
| "tests/test_spacing.py", |
| [ |
| "TestSpacingCase", |
| "test_ill_pixdim" |
| ] |
| ] |
| ], |
| "test_spacingd_3d": [ |
| [ |
| "tests/test_spacingd.py", |
| [ |
| "TestSpacingDCase", |
| "test_spacingd_3d" |
| ] |
| ] |
| ], |
| "test_spacingd_2d": [ |
| [ |
| "tests/test_spacingd.py", |
| [ |
| "TestSpacingDCase", |
| "test_spacingd_2d" |
| ] |
| ] |
| ], |
| "test_interp_all": [ |
| [ |
| "tests/test_spacingd.py", |
| [ |
| "TestSpacingDCase", |
| "test_interp_all" |
| ] |
| ] |
| ], |
| "test_interp_sep": [ |
| [ |
| "tests/test_spacingd.py", |
| [ |
| "TestSpacingDCase", |
| "test_interp_sep" |
| ] |
| ] |
| ], |
| "test_tensor_shape": [ |
| [ |
| "tests/test_spatial_crop.py", |
| [ |
| "TestSpatialCrop", |
| "test_tensor_shape" |
| ] |
| ] |
| ], |
| "test_error": [ |
| [ |
| "tests/test_spatial_crop.py", |
| [ |
| "TestSpatialCrop", |
| "test_error" |
| ] |
| ] |
| ], |
| "test_state_cacher": [ |
| [ |
| "tests/test_state_cacher.py", |
| [ |
| "TestStateCacher", |
| "test_state_cacher" |
| ] |
| ] |
| ], |
| "test_zerostd": [ |
| [ |
| "tests/test_std_shift_intensity.py", |
| [ |
| "TestStdShiftIntensity", |
| "test_zerostd" |
| ] |
| ], |
| [ |
| "tests/test_std_shift_intensityd.py", |
| [ |
| "TestStdShiftIntensityd", |
| "test_zerostd" |
| ] |
| ] |
| ], |
| "test_dtype": [ |
| [ |
| "tests/test_std_shift_intensity.py", |
| [ |
| "TestStdShiftIntensity", |
| "test_dtype" |
| ] |
| ], |
| [ |
| "tests/test_std_shift_intensityd.py", |
| [ |
| "TestStdShiftIntensityd", |
| "test_dtype" |
| ] |
| ] |
| ], |
| "test_subpixel_shape": [ |
| [ |
| "tests/test_subpixel_upsample.py", |
| [ |
| "TestSUBPIXEL", |
| "test_subpixel_shape" |
| ] |
| ] |
| ], |
| "inferrer_fn": [ |
| [ |
| "tests/test_testtimeaugmentation.py", |
| [ |
| "TestTestTimeAugmentation", |
| "test_test_time_augmentation", |
| "inferrer_fn" |
| ] |
| ] |
| ], |
| "test_test_time_augmentation": [ |
| [ |
| "tests/test_testtimeaugmentation.py", |
| [ |
| "TestTestTimeAugmentation", |
| "test_test_time_augmentation" |
| ] |
| ] |
| ], |
| "test_fail_non_random": [ |
| [ |
| "tests/test_testtimeaugmentation.py", |
| [ |
| "TestTestTimeAugmentation", |
| "test_fail_non_random" |
| ] |
| ] |
| ], |
| "test_fail_random_but_not_invertible": [ |
| [ |
| "tests/test_testtimeaugmentation.py", |
| [ |
| "TestTestTimeAugmentation", |
| "test_fail_random_but_not_invertible" |
| ] |
| ] |
| ], |
| "test_single_transform": [ |
| [ |
| "tests/test_testtimeaugmentation.py", |
| [ |
| "TestTestTimeAugmentation", |
| "test_single_transform" |
| ] |
| ] |
| ], |
| "test_image_no_label": [ |
| [ |
| "tests/test_testtimeaugmentation.py", |
| [ |
| "TestTestTimeAugmentation", |
| "test_image_no_label" |
| ] |
| ] |
| ], |
| "test_requires_meta_dict": [ |
| [ |
| "tests/test_testtimeaugmentation.py", |
| [ |
| "TestTestTimeAugmentation", |
| "test_requires_meta_dict" |
| ] |
| ] |
| ], |
| "test_dataloader": [ |
| [ |
| "tests/test_thread_buffer.py", |
| [ |
| "TestDataLoader", |
| "test_dataloader" |
| ] |
| ] |
| ], |
| "test_time": [ |
| [ |
| "tests/test_thread_buffer.py", |
| [ |
| "TestDataLoader", |
| "test_time" |
| ] |
| ] |
| ], |
| "test_container": [ |
| [ |
| "tests/test_threadcontainer.py", |
| [ |
| "TestThreadContainer", |
| "test_container" |
| ] |
| ] |
| ], |
| "test_plot": [ |
| [ |
| "tests/test_threadcontainer.py", |
| [ |
| "TestThreadContainer", |
| "test_plot" |
| ] |
| ] |
| ], |
| "case_1_seconds": [ |
| [ |
| "tests/test_timedcall.py", |
| [ |
| "case_1_seconds" |
| ] |
| ] |
| ], |
| "case_1_seconds_skip": [ |
| [ |
| "tests/test_timedcall.py", |
| [ |
| "case_1_seconds_skip" |
| ] |
| ] |
| ], |
| "case_1_seconds_timeout": [ |
| [ |
| "tests/test_timedcall.py", |
| [ |
| "case_1_seconds_timeout" |
| ] |
| ] |
| ], |
| "case_1_seconds_timeout_warning": [ |
| [ |
| "tests/test_timedcall.py", |
| [ |
| "case_1_seconds_timeout_warning" |
| ] |
| ] |
| ], |
| "case_1_seconds_bad": [ |
| [ |
| "tests/test_timedcall.py", |
| [ |
| "case_1_seconds_bad" |
| ] |
| ] |
| ], |
| "test_good_call": [ |
| [ |
| "tests/test_timedcall.py", |
| [ |
| "TestTimedCall", |
| "test_good_call" |
| ] |
| ] |
| ], |
| "test_skip_timing": [ |
| [ |
| "tests/test_timedcall.py", |
| [ |
| "TestTimedCall", |
| "test_skip_timing" |
| ] |
| ] |
| ], |
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