Linmj commited on
Commit
d6d83d5
·
verified ·
1 Parent(s): 12a244a

Add files using upload-large-folder tool

Browse files
This view is limited to 50 files because it contains too many changes.   See raw diff
Files changed (50) hide show
  1. .gitattributes +2 -0
  2. all_structures.zip +3 -0
  3. ccd_cache/clusters-by-entity-40.txt +3 -0
  4. ccd_cache/components.v20240608.cif +3 -0
  5. ccd_cache/components.v20240608.cif.rdkit_mol.pkl +3 -0
  6. checkpoint/esm2_t36_3B_UR50D-contact-regression.pt +3 -0
  7. checkpoint/esm2_t36_3B_UR50D.pt +3 -0
  8. checkpoint/protenix_mini_esm_v0.5.0.pt +3 -0
  9. processed/1bj1_K_J_V.pkl.gz +3 -0
  10. processed/1ic7_H_L_Y.pkl.gz +3 -0
  11. processed/1ncd_H_L_N.pkl.gz +3 -0
  12. processed/1ymh_D_C_F.pkl.gz +3 -0
  13. processed/1ynt_D_C_G.pkl.gz +3 -0
  14. processed/1yqv_H_L_Y.pkl.gz +3 -0
  15. processed/2a6d_H_L_.pkl.gz +3 -0
  16. processed/2f5a_H_L_.pkl.gz +3 -0
  17. processed/2p4a_B__A.pkl.gz +3 -0
  18. processed/2v7n_F_E_.pkl.gz +3 -0
  19. processed/3a6b_H_L_Y.pkl.gz +3 -0
  20. processed/3gi9_H_L_C.pkl.gz +3 -0
  21. processed/3ma9_H_L_A.pkl.gz +3 -0
  22. processed/3q6f_H_G_.pkl.gz +3 -0
  23. processed/3qrg_H_L_.pkl.gz +3 -0
  24. processed/4gms_J_N_E.pkl.gz +3 -0
  25. processed/4kjw_C_D_A.pkl.gz +3 -0
  26. processed/4kph_I_M_.pkl.gz +3 -0
  27. processed/4lgs_B__A.pkl.gz +3 -0
  28. processed/4llu_C_D_.pkl.gz +3 -0
  29. processed/4lu5_I_M_A.pkl.gz +3 -0
  30. processed/4nc1_F__B.pkl.gz +3 -0
  31. processed/4nnp_H_L_A.pkl.gz +3 -0
  32. processed/4s1q_H_L_G.pkl.gz +3 -0
  33. processed/4tsb_H_L_A.pkl.gz +3 -0
  34. processed/4u0r_B_C_A.pkl.gz +3 -0
  35. processed/4w6x_B__A.pkl.gz +3 -0
  36. processed/5d1q_C_D_E.pkl.gz +3 -0
  37. processed/5d1z_B_A_I.pkl.gz +3 -0
  38. processed/5d72_H_L_A.pkl.gz +3 -0
  39. processed/5dxw_A__.pkl.gz +3 -0
  40. processed/5f9w_B_C_A.pkl.gz +3 -0
  41. processed/5gs1_P_O_.pkl.gz +3 -0
  42. processed/5jor_F_E_.pkl.gz +3 -0
  43. processed/5jz7_J_K_E.pkl.gz +3 -0
  44. processed/5k9q_S_T_NMO.pkl.gz +3 -0
  45. processed/5o04_C__A.pkl.gz +3 -0
  46. processed/5ty6_H_L_.pkl.gz +3 -0
  47. processed/5u0u_G_g_.pkl.gz +3 -0
  48. processed/5vgj_H_L_G.pkl.gz +3 -0
  49. processed/5w05_H_L_.pkl.gz +3 -0
  50. processed/5w08_O_P_E.pkl.gz +3 -0
.gitattributes CHANGED
@@ -57,3 +57,5 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
57
  # Video files - compressed
58
  *.mp4 filter=lfs diff=lfs merge=lfs -text
59
  *.webm filter=lfs diff=lfs merge=lfs -text
 
 
 
57
  # Video files - compressed
58
  *.mp4 filter=lfs diff=lfs merge=lfs -text
59
  *.webm filter=lfs diff=lfs merge=lfs -text
60
+ ccd_cache/clusters-by-entity-40.txt filter=lfs diff=lfs merge=lfs -text
61
+ ccd_cache/components.v20240608.cif filter=lfs diff=lfs merge=lfs -text
all_structures.zip ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e1b41e506898becfcbb6839519aa24a484ad97b9c9e0feaa9c512260213f48cf
3
+ size 6807457729
ccd_cache/clusters-by-entity-40.txt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1ab4af905e75b382eda8dec59917dc3608bee0729e36b9e71baf860bbe86850c
3
+ size 21699572
ccd_cache/components.v20240608.cif ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7240b17369ccfbbcc86e2d02dc8c9db59f46c32e0420f58889c6c121c60bfef0
3
+ size 427767290
ccd_cache/components.v20240608.cif.rdkit_mol.pkl ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2d6caced2d26c62015115a1d0a50f4106755a300e0c2a2d2b5c101c9038dcbcd
3
+ size 125903802
checkpoint/esm2_t36_3B_UR50D-contact-regression.pt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4da500eab246481dc9c8c95bc7b1d02f2803d761c380b0e95186d4a07d0fc84e
3
+ size 6759
checkpoint/esm2_t36_3B_UR50D.pt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7de8b4082ba15891959ab368b77ce3886697af1efb16d3c9e9e7b0c5d3f07500
3
+ size 5678116398
checkpoint/protenix_mini_esm_v0.5.0.pt ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1301bba9ad322518eace60fd244ded7904439f55317e90d402cc7a0c06026664
3
+ size 541640990
processed/1bj1_K_J_V.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:98a079ec880f1bea431d584cd3bb0d402458bd020155f33bed40b42e0f4b3d8c
3
+ size 64367
processed/1ic7_H_L_Y.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:5a3149d59412d12e82a45d90e1a9a4134e9dd9307d41553d78f5c0d70c53e002
3
+ size 66891
processed/1ncd_H_L_N.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6f62457ef4efa2298beee02337baac55abbe2f800fa5e56d5e86c8c0da0061e9
3
+ size 118007
processed/1ymh_D_C_F.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:afdf684e5d100fd3193f5e035428d3e44337a0ca426a0201248b96a3cc7fc6de
3
+ size 59679
processed/1ynt_D_C_G.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0353943a51b621d8ec66cb56beb91eb1e4f21249c3dd881c49064ac6fc775a24
3
+ size 10678
processed/1yqv_H_L_Y.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ddd5ae26b8c2fb8b0e7814392dcc0692ce65a35f13d9dd1f49bdd154ccd32be6
3
+ size 67059
processed/2a6d_H_L_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:327bdca055f019ce9f17c0c460bfe11ebeded6ea8c19931072c42be9fb3a27ae
3
+ size 47972
processed/2f5a_H_L_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:e140e3de5fe2c4f57fb99f6b714e2c82bc377688c531e153989ccc5333a7edfb
3
+ size 48345
processed/2p4a_B__A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:8b7350ff2493f073f4568090298ad2dbbe65eede15b7ed46aa2bbf0c2287be33
3
+ size 49649
processed/2v7n_F_E_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b874a0089c6b061e9674a8e53e67012061167b3ce7f8a2c7154b23b584828e5e
3
+ size 46827
processed/3a6b_H_L_Y.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:7e377fea918d17ff598138cb0326eccb2355c251f68aecdc4101351c7fbf59a4
3
+ size 66927
processed/3gi9_H_L_C.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:a7e2156e6dc8c5c0db9199203340214791e4c2d7c615780b80c0591f3aa56576
3
+ size 123663
processed/3ma9_H_L_A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:afdd19bc1886f136dda48293d1a3278f3a82d5068108e04360feef373a6e4591
3
+ size 78901
processed/3q6f_H_G_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6f56f18b408a15bf5382dcef41c5b62df8a7beb6326dea6887f71f0348d3d3c4
3
+ size 48931
processed/3qrg_H_L_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:eccd26952a917fee525d89651594a49563acff9de0b18e1473f26558e16cc69d
3
+ size 48102
processed/4gms_J_N_E.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ddf98a092aef11fc802ea1838b9addde359cf7ecac4f59499be3d317c36b281e
3
+ size 102287
processed/4kjw_C_D_A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:ef9b027312bb0d3fc2e6ee02d0b940bee3d9cad215fcf011ff07f740cd0db18b
3
+ size 122991
processed/4kph_I_M_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3df0d510489936818a66e8d6f759549f77a626ba3d55267f0ebb6efa17995747
3
+ size 45898
processed/4lgs_B__A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:826feeb0745d693f9c25e684bf22758c213b67b86b292258407694f55c3cfbbe
3
+ size 77630
processed/4llu_C_D_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:2fa2ed93b9d5349e3b7c77ae9677443278118e6d9cb1fbb155fb3e2aca136aa1
3
+ size 46630
processed/4lu5_I_M_A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:28f42292cb49605ff02bda7c0af6bd933f5c7edf84d4e994f3b1c8e6f822017a
3
+ size 61959
processed/4nc1_F__B.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0ea4651f0f4e7db574c4cf581dc5b223246d60223d2aab4269ead18c32ce79d4
3
+ size 73357
processed/4nnp_H_L_A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:01e4c55c908cf327bfae91422c372f7262ea8f78523301f12b3b378988cb0229
3
+ size 95160
processed/4s1q_H_L_G.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:b3cb05cf33aeb841f4e4f2f29252196236a5b694347f944ff68ab29a2dc60f22
3
+ size 108220
processed/4tsb_H_L_A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c15e0090fad78f280a6b59773bc1a003ba8c73cba005a6ea4ecb61fffbcb3a7f
3
+ size 67856
processed/4u0r_B_C_A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:c553c5c566b303fbd61732575dcc5d5a195599323e0f51f61562194d6805b231
3
+ size 105251
processed/4w6x_B__A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:59365df5033af629cd5ab02113ef64e38494b248a953d3cc272daf38e13c5d0b
3
+ size 53793
processed/5d1q_C_D_E.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:6478a6e001791446bdad3d4fe20bf37875b378c363ec181ba58f0800d7530632
3
+ size 68999
processed/5d1z_B_A_I.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:f27ea5543e7dd913f8efd1a284b53b410aa653823780b0822d5ab3e02d73330e
3
+ size 73363
processed/5d72_H_L_A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:0a1b8bb29309088afc33857f9b16533bb065a34d01af47980c0fc5de4b693a5d
3
+ size 64639
processed/5dxw_A__.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3db4768730485e9ba7ed28f4ff57016834c47525bdac2d1c612b51500ea2d8cf
3
+ size 27573
processed/5f9w_B_C_A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:1b095842754e92097839d1064cbe8ac7969294b221fd9a57dd5d24965961acc4
3
+ size 108076
processed/5gs1_P_O_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:3a20cf9e256418f1fdd1116050791a2ea8fbcb83d7b830b4df93b67e87200101
3
+ size 46562
processed/5jor_F_E_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:4034d16da152b15f40c6e991d7b1ea6eaf99e746f0e0fc4e88550808a187d6c6
3
+ size 47680
processed/5jz7_J_K_E.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:20468a52782e27f89694474071b51cab5423dcb1b1c839b8dd8c924145ee3f23
3
+ size 66826
processed/5k9q_S_T_NMO.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:db97c074f01a7c2fbe70a19615bb0ba28d56c149b3090c3f44d8bff5173efb2b
3
+ size 180530
processed/5o04_C__A.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:83bf188bf027ef0d2252a7db89eb4277985cac043c895844c5dd838ca01ab74a
3
+ size 80145
processed/5ty6_H_L_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:880e77ec9a4bad97e064ca3a821f7f227fab3a4d6f4ec3675687065d4c551f4e
3
+ size 49029
processed/5u0u_G_g_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:17b464c732edffe1715a883fbcbba2d0d8022ccb569d7a8d99425fe24a6c01ac
3
+ size 48668
processed/5vgj_H_L_G.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:d120fefa904223299ca7e732e2a14df6e5260ba99ee97c2e632a5088360ae8cb
3
+ size 69531
processed/5w05_H_L_.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:cf7c82236b83b2821c18bbbf3aee09a9a22675ab93713f29cf79617beff4cf2f
3
+ size 47829
processed/5w08_O_P_E.pkl.gz ADDED
@@ -0,0 +1,3 @@
 
 
 
 
1
+ version https://git-lfs.github.com/spec/v1
2
+ oid sha256:87c3c3a06411251c9501a51758e3100fb9276f7922ab729228d7844648fbb30b
3
+ size 97655