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- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_001_s-0.010/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_001_s-0.010/meta.release.json +9 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_001_s-0.010/scf.in +254 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_003_s-0.010/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_003_s-0.010/meta.release.json +9 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_003_s-0.010/pw2bgw.in +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_003_s-0.010/scf.in +254 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_005_s-0.010/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_005_s-0.010/meta.release.json +9 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_005_s-0.010/pw2bgw.in +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_005_s-0.010/scf.in +254 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_008_s-0.005/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_008_s-0.005/meta.release.json +9 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_008_s-0.005/pw2bgw.in +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_008_s-0.005/scf.in +254 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_010_s-0.005/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_010_s-0.005/meta.release.json +9 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_010_s-0.005/pw2bgw.in +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_010_s-0.005/scf.in +254 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_012_s+0.005/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_012_s+0.005/meta.release.json +9 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_012_s+0.005/pw2bgw.in +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_012_s+0.005/scf.in +254 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_016_s+0.010/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_016_s+0.010/meta.release.json +9 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_016_s+0.010/pw2bgw.in +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_016_s+0.010/scf.in +254 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_017_s+0.010/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_017_s+0.010/meta.release.json +9 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_017_s+0.010/pw2bgw.in +11 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_017_s+0.010/scf.in +254 -0
- releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_020_s+0.010/meta.release.json +9 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/aohamiltonian/info.json +1 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/meta.json +17 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/meta.release.json +8 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/nscf.in +90 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/pw2bgw.in +7 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/scf.in +87 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/aohamiltonian/info.json +1 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/meta.json +17 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/meta.release.json +8 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/nscf.in +90 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/pw2bgw.in +7 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/scf.in +87 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-123/aohamiltonian/info.json +1 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-123/calc.py +11 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-123/meta.json +17 -0
- releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-123/meta.release.json +8 -0
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_001_s-0.010/calc.py
ADDED
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from HPRO import PW2AOkernel
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kernel = PW2AOkernel(
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lcao_interface='siesta',
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lcaodata_root='../../../aobasis',
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hrdata_interface='qe-bgw',
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vscdir='./VSC',
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upfdir='../../../pseudo',
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ecutwfn=30,
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)
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kernel.run_pw2ao_rs('./aohamiltonian')
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releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_001_s-0.010/meta.release.json
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{
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"dataset": "raman_v3_308",
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"frame_id": "strain_iso/frame_001_s-0.010",
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"has_aohamiltonian": true,
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"has_ki_hamiltonian": false,
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"has_overlap": true,
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"source_path": "/capstor/scratch/cscs/apoliukh/diamond_new_data/data/strain_iso/frame_001_s-0.010",
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"tier": "strain_iso"
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}
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releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_001_s-0.010/scf.in
ADDED
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| 1 |
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&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
prefix = 'siso001'
|
| 4 |
+
pseudo_dir = '../../../pseudo'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
tprnfor = .true.
|
| 7 |
+
tstress = .true.
|
| 8 |
+
/
|
| 9 |
+
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ibrav = 0
|
| 12 |
+
nat = 216
|
| 13 |
+
ntyp = 1
|
| 14 |
+
ecutwfc = 80.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
nbnd = 512
|
| 17 |
+
occupations = 'fixed'
|
| 18 |
+
/
|
| 19 |
+
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
diagonalization = 'david'
|
| 22 |
+
mixing_mode = 'plain'
|
| 23 |
+
mixing_beta = 0.7
|
| 24 |
+
conv_thr = 1e-13
|
| 25 |
+
/
|
| 26 |
+
|
| 27 |
+
CELL_PARAMETERS angstrom
|
| 28 |
+
10.593990000000 0.000000000000 0.000000000000
|
| 29 |
+
0.000000000000 10.593990000000 0.000000000000
|
| 30 |
+
0.000000000000 0.000000000000 10.593990000000
|
| 31 |
+
|
| 32 |
+
ATOMIC_SPECIES
|
| 33 |
+
C 12.011 C-PBE-NLCC.upf
|
| 34 |
+
|
| 35 |
+
ATOMIC_POSITIONS crystal
|
| 36 |
+
C 0.000502631243 0.001857280597 0.000527828400
|
| 37 |
+
C 0.169718924221 0.162899086681 0.002249409579
|
| 38 |
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C 0.166959641982 -0.000736201999 0.166501242045
|
| 39 |
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C -0.000611783296 0.168661834178 0.166973241563
|
| 40 |
+
C 0.085906630810 0.084140770396 0.086827119849
|
| 41 |
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C 0.251966524920 0.248140722296 0.081577949922
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| 42 |
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C 0.247250164762 0.084363914191 0.249776833910
|
| 43 |
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C 0.081755556251 0.249801994153 0.249610736546
|
| 44 |
+
C 0.000133354120 0.000586447701 0.332771229784
|
| 45 |
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C 0.168518017041 0.166232422462 0.333359708982
|
| 46 |
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C 0.164766246275 -0.003019877774 0.500983248795
|
| 47 |
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C -0.003292626144 0.165439841648 0.497734103657
|
| 48 |
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C 0.082646796485 0.083844797817 0.416023582240
|
| 49 |
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C 0.249935751115 0.250407554921 0.415148418306
|
| 50 |
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C 0.248557899410 0.081819999652 0.582156490601
|
| 51 |
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C 0.081900696409 0.248388428265 0.582522314924
|
| 52 |
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C -0.002416176164 -0.000002777755 0.665990027327
|
| 53 |
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C 0.166834186523 0.165480517804 0.666292609834
|
| 54 |
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C 0.166756048200 -0.001358736285 0.835412323995
|
| 55 |
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C -0.000313332830 0.167431701632 0.834747145825
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| 56 |
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C 0.082956559171 0.084681478280 0.745587228073
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| 57 |
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C 0.251173434226 0.248132401064 0.748446144604
|
| 58 |
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C 0.249607658606 0.079724412954 0.915602024131
|
| 59 |
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C 0.085226389638 0.247230592522 0.919017441847
|
| 60 |
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C -0.003921801162 0.333058003083 -0.002057358017
|
| 61 |
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C 0.167844943632 0.499545122196 0.000096014356
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| 62 |
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C 0.163968313160 0.333814955947 0.165095195617
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| 63 |
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C 0.001702654657 0.499524729792 0.168243076933
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| 64 |
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C 0.082187732233 0.419429138277 0.085083909942
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| 65 |
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C 0.247669417026 0.583855954524 0.083249658259
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| 66 |
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C 0.248858109310 0.415838499250 0.251288903107
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| 67 |
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C 0.084811866907 0.584332394157 0.250731886972
|
| 68 |
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C 0.000112351715 0.334874019450 0.333377469822
|
| 69 |
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C 0.168234537775 0.498671577759 0.333479068381
|
| 70 |
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C 0.163280991635 0.333100093787 0.499669007168
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| 71 |
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C 0.000394819514 0.498564053177 0.502956120672
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| 72 |
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C 0.084460023676 0.415216566363 0.418460836530
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| 73 |
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C 0.253959209293 0.585980961874 0.413213935510
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| 74 |
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C 0.247021884076 0.416288797792 0.584547864925
|
| 75 |
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C 0.084863333157 0.581829545437 0.586178301249
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| 76 |
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C -0.003284852987 0.332817021384 0.668829358020
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| 77 |
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C 0.167565998688 0.502192973735 0.666268002195
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| 78 |
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C 0.165733251536 0.336753907134 0.834417661531
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| 79 |
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C -0.000515584854 0.499927447034 0.833314372489
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| 80 |
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C 0.082843968310 0.419414822574 0.747783687797
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| 81 |
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C 0.250838389098 0.584856502251 0.747606524814
|
| 82 |
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C 0.253329057879 0.417627781301 0.912362635551
|
| 83 |
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C 0.084073697239 0.578333493150 0.921131236075
|
| 84 |
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C -0.000740959404 0.664540110014 0.000848889928
|
| 85 |
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C 0.168225418524 0.833127001939 0.000184636343
|
| 86 |
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C 0.166856300809 0.665919030127 0.165206837667
|
| 87 |
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C 0.003399259143 0.832907723729 0.169071942485
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| 88 |
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C 0.082675129690 0.744714253835 0.085516238516
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| 89 |
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C 0.250833066949 0.913676791858 0.080723131329
|
| 90 |
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C 0.247896245101 0.748445667130 0.249817909376
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| 91 |
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C 0.085938550944 0.916166990722 0.250683474905
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| 92 |
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C -0.001630707297 0.665327603992 0.335196933993
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| 93 |
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C 0.166077464158 0.834777580806 0.334290969713
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| 94 |
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C 0.417589371174 0.086542357574 0.749737775134
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C 0.583192022218 0.251890082423 0.752267729715
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C 0.415114903283 0.246891872556 0.916350825522
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C 0.331352970732 0.333761065093 0.001236154525
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C 0.498214778920 0.502156828100 0.003634201310
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C 0.498833012600 0.331653834095 0.166985013224
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C 0.332637629697 0.499424698244 0.164206847636
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|
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C 0.585249183132 0.581987751677 0.080063831461
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| 138 |
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C 0.584793470741 0.417310604739 0.251501360685
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C 0.416276132206 0.582244661661 0.249292900030
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C 0.336621358973 0.332537099386 0.326821017771
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C 0.504597473765 0.335120775009 0.497903493001
|
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C 0.333177025804 0.500870316192 0.500654221866
|
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C 0.416088478270 0.416234602860 0.414289813157
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C 0.583405974641 0.585206847329 0.418713330559
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C 0.581228007602 0.416998808892 0.583757042749
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C 0.332810578838 0.332323542552 0.667470734622
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C 0.499002784786 0.497811127176 0.665889346459
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C 0.498288559093 0.333070802186 0.832329585418
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C 0.331963525089 0.497617711392 0.829591660803
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C 0.417146232863 0.415087708624 0.748035630179
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C 0.581531885289 0.580249780202 0.754748113812
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C 0.582780700425 0.414985532422 0.910628266974
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C 0.502599425717 0.834656212212 -0.000416703053
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| 158 |
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C 0.498712756681 0.667997291857 0.166057108197
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C 0.333743796439 0.831716918775 0.166239229607
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C 0.332216603478 0.666149709789 0.334001242562
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C 0.498155840386 0.831332984268 0.333097587642
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C 0.504386209225 0.666154215959 0.502955036215
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| 167 |
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C 0.332477375109 0.830996622208 0.500440302460
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C 0.416905100659 0.749796024878 0.414492930459
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| 169 |
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C 0.582027896131 0.919252909488 0.420366951379
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| 171 |
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C 0.414912923208 0.919082592787 0.583944629774
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| 172 |
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C 0.336202049087 0.662952238486 0.670223283292
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| 173 |
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C 0.498222605979 0.838050951980 0.667204838272
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| 174 |
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C 0.498577015019 0.667120645463 0.831842963422
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| 175 |
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C 0.335904272947 0.833343547654 0.835290195886
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| 176 |
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C 0.583592703229 0.915932252229 0.748430763479
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| 178 |
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C 0.583200171454 0.746467956569 0.914284639855
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| 179 |
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C 0.416623709868 0.915789274719 0.916526190967
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| 180 |
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C 0.668244719729 -0.000811144406 -0.002490039295
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| 181 |
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C 0.832969931775 0.167484429449 -0.000034557025
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| 182 |
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C 0.667930360756 0.164484623071 0.166828402282
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| 186 |
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|
| 188 |
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C 0.665992612574 0.000223987844 0.332215742053
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| 189 |
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C 0.916119071541 0.080276921117 0.578793511315
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| 195 |
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| 196 |
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C 0.664369501181 -0.000714222090 0.666747025179
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C 0.833708595296 0.160865065669 0.665918283804
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| 200 |
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C 0.750056415229 0.081071190195 0.746381996596
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| 201 |
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C 0.915490271100 0.248576687039 0.749522478074
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C 0.836640398527 0.494590041582 0.000545128141
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| 207 |
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C 0.667228589269 0.496974510733 0.165450313090
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| 208 |
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C 0.750040597769 0.419641652868 0.083813536387
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| 209 |
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| 210 |
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C 0.917330783626 0.418404871354 0.246966949276
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| 211 |
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C 0.749788701172 0.583045126716 0.250355612811
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| 214 |
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| 217 |
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C 0.918356708261 0.582959215546 0.418451155050
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| 218 |
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| 219 |
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C 0.749720122494 0.584189119412 0.585246834674
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| 220 |
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C 0.668232197187 0.332463796735 0.668664812698
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| 221 |
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|
| 223 |
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C 0.667431986711 0.497455972767 0.834139758324
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| 224 |
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C 0.748347173496 0.418977308328 0.749875607846
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| 225 |
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C 0.913875057051 0.585769964665 0.751099445434
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| 226 |
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C 0.918641066830 0.415632421205 0.916859478368
|
| 227 |
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C 0.750692621224 0.582532296007 0.914997967488
|
| 228 |
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C 0.668803331075 0.666532600668 0.003101690930
|
| 229 |
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C 0.834106279208 0.833322912465 0.000568104072
|
| 230 |
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C 0.832280504139 0.665270321029 0.164061007452
|
| 231 |
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C 0.668557959359 0.836175737571 0.169003537994
|
| 232 |
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C 0.749018206246 0.749279696382 0.083120169210
|
| 233 |
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C 0.916849053614 0.916912551245 0.087594242561
|
| 234 |
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C 0.916436566614 0.753096400898 0.248247385911
|
| 235 |
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C 0.749430144076 0.913489987449 0.249784310356
|
| 236 |
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C 0.664526421003 0.665560664365 0.334204172282
|
| 237 |
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C 0.829333635066 0.833747901758 0.335977974800
|
| 238 |
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C 0.836091574481 0.668459679161 0.501170037250
|
| 239 |
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C 0.665880361904 0.835667822075 0.498641312372
|
| 240 |
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C 0.752532205662 0.750351112619 0.416577678028
|
| 241 |
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C 0.918016392651 0.918753822372 0.415685380989
|
| 242 |
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C 0.913380784776 0.752372756303 0.584812529197
|
| 243 |
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C 0.744377335488 0.922912739742 0.586786306463
|
| 244 |
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C 0.667513794165 0.666347549035 0.665204137947
|
| 245 |
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C 0.832767900696 0.835044058538 0.664266701155
|
| 246 |
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C 0.832911689490 0.668026067040 0.833854839937
|
| 247 |
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C 0.667087942815 0.835739345131 0.832867892828
|
| 248 |
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C 0.752203095611 0.751956454438 0.749650006065
|
| 249 |
+
C 0.916890657112 0.914302973190 0.746848349392
|
| 250 |
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C 0.914295333803 0.753939759802 0.918209332353
|
| 251 |
+
C 0.746990869771 0.914021366539 0.919608314037
|
| 252 |
+
|
| 253 |
+
K_POINTS automatic
|
| 254 |
+
3 3 3 0 0 0
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_003_s-0.010/calc.py
ADDED
|
@@ -0,0 +1,11 @@
|
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|
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|
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|
| 1 |
+
from HPRO import PW2AOkernel
|
| 2 |
+
|
| 3 |
+
kernel = PW2AOkernel(
|
| 4 |
+
lcao_interface='siesta',
|
| 5 |
+
lcaodata_root='../../../aobasis',
|
| 6 |
+
hrdata_interface='qe-bgw',
|
| 7 |
+
vscdir='./VSC',
|
| 8 |
+
upfdir='../../../pseudo',
|
| 9 |
+
ecutwfn=30,
|
| 10 |
+
)
|
| 11 |
+
kernel.run_pw2ao_rs('./aohamiltonian')
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_003_s-0.010/meta.release.json
ADDED
|
@@ -0,0 +1,9 @@
|
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|
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|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"dataset": "raman_v3_308",
|
| 3 |
+
"frame_id": "strain_iso/frame_003_s-0.010",
|
| 4 |
+
"has_aohamiltonian": true,
|
| 5 |
+
"has_ki_hamiltonian": false,
|
| 6 |
+
"has_overlap": true,
|
| 7 |
+
"source_path": "/capstor/scratch/cscs/apoliukh/diamond_new_data/data/strain_iso/frame_003_s-0.010",
|
| 8 |
+
"tier": "strain_iso"
|
| 9 |
+
}
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_003_s-0.010/pw2bgw.in
ADDED
|
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
| 1 |
+
&input_pw2bgw
|
| 2 |
+
prefix = 'siso003'
|
| 3 |
+
outdir = './tmp'
|
| 4 |
+
real_or_complex = 2
|
| 5 |
+
wfng_flag = .false.
|
| 6 |
+
rhog_flag = .false.
|
| 7 |
+
vxcg_flag = .false.
|
| 8 |
+
vscg_flag = .true.
|
| 9 |
+
vscg_file = 'VSC'
|
| 10 |
+
vkbg_flag = .false.
|
| 11 |
+
/
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_003_s-0.010/scf.in
ADDED
|
@@ -0,0 +1,254 @@
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|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
prefix = 'siso003'
|
| 4 |
+
pseudo_dir = '../../../pseudo'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
tprnfor = .true.
|
| 7 |
+
tstress = .true.
|
| 8 |
+
/
|
| 9 |
+
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ibrav = 0
|
| 12 |
+
nat = 216
|
| 13 |
+
ntyp = 1
|
| 14 |
+
ecutwfc = 80.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
nbnd = 512
|
| 17 |
+
occupations = 'fixed'
|
| 18 |
+
/
|
| 19 |
+
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
diagonalization = 'david'
|
| 22 |
+
mixing_mode = 'plain'
|
| 23 |
+
mixing_beta = 0.7
|
| 24 |
+
conv_thr = 1e-13
|
| 25 |
+
/
|
| 26 |
+
|
| 27 |
+
CELL_PARAMETERS angstrom
|
| 28 |
+
10.593990000000 0.000000000000 0.000000000000
|
| 29 |
+
0.000000000000 10.593990000000 0.000000000000
|
| 30 |
+
0.000000000000 0.000000000000 10.593990000000
|
| 31 |
+
|
| 32 |
+
ATOMIC_SPECIES
|
| 33 |
+
C 12.011 C-PBE-NLCC.upf
|
| 34 |
+
|
| 35 |
+
ATOMIC_POSITIONS crystal
|
| 36 |
+
C -0.001413599909 -0.000481088069 0.000829060649
|
| 37 |
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C 0.162647204582 0.165198176539 0.002898766703
|
| 38 |
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C 0.163177609985 0.001399537554 0.166966716766
|
| 39 |
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C 0.003099358875 0.167524940323 0.165552752103
|
| 40 |
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C 0.082397390983 0.082137142797 0.083267753774
|
| 41 |
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C 0.251864532138 0.249343662823 0.079815653027
|
| 42 |
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C 0.252629683261 0.079917063525 0.247164000875
|
| 43 |
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C 0.082656500761 0.246657163463 0.249146766104
|
| 44 |
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C 0.002496993620 -0.005404962210 0.334755578836
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| 45 |
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C 0.162854690521 0.169400395333 0.333833818856
|
| 46 |
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C 0.167430835015 0.000646138981 0.502385702607
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| 47 |
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C 0.001490630485 0.169478844217 0.502614186448
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| 48 |
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C 0.083404339930 0.082664305785 0.415476103302
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| 49 |
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| 50 |
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| 51 |
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| 52 |
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| 53 |
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| 54 |
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| 55 |
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| 56 |
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| 66 |
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| 67 |
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| 70 |
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C 0.417605279165 0.082825794243 0.081297067809
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| 219 |
+
C 0.749384754219 0.584387162267 0.583516278534
|
| 220 |
+
C 0.666802645359 0.330511769179 0.664595220402
|
| 221 |
+
C 0.831166722819 0.500521831140 0.667980226083
|
| 222 |
+
C 0.834034027073 0.332180847476 0.836728115904
|
| 223 |
+
C 0.668841616725 0.501762428068 0.831824620949
|
| 224 |
+
C 0.748717684902 0.412919093732 0.750766181702
|
| 225 |
+
C 0.912959335588 0.584320601487 0.750493821056
|
| 226 |
+
C 0.917888286598 0.416912865958 0.918741166744
|
| 227 |
+
C 0.750402623189 0.584003691921 0.916772035087
|
| 228 |
+
C 0.661862328520 0.668515652242 0.001601400532
|
| 229 |
+
C 0.833652385343 0.831058808248 0.000788408672
|
| 230 |
+
C 0.832306374783 0.666129160659 0.165873321807
|
| 231 |
+
C 0.667287709376 0.833097009863 0.165316170926
|
| 232 |
+
C 0.751161040314 0.751851970114 0.084121608514
|
| 233 |
+
C 0.911590367298 0.915696341500 0.081362023173
|
| 234 |
+
C 0.914758188954 0.746547155514 0.250896399666
|
| 235 |
+
C 0.750181031660 0.919005752612 0.255292554482
|
| 236 |
+
C 0.664110827572 0.666704864065 0.334687223696
|
| 237 |
+
C 0.830410811209 0.836031139699 0.335947801843
|
| 238 |
+
C 0.833230502783 0.667500046494 0.500797621913
|
| 239 |
+
C 0.668856570900 0.829437562486 0.498982942390
|
| 240 |
+
C 0.749673181996 0.752386214150 0.416904605866
|
| 241 |
+
C 0.916473939823 0.918616796556 0.414595646398
|
| 242 |
+
C 0.913274890991 0.748620664529 0.583297400620
|
| 243 |
+
C 0.747916460122 0.916406205565 0.585780104141
|
| 244 |
+
C 0.666812446708 0.671045290832 0.668004454042
|
| 245 |
+
C 0.832589842455 0.830507394346 0.668485867363
|
| 246 |
+
C 0.833200298541 0.664832830202 0.831505056230
|
| 247 |
+
C 0.667370265449 0.832800452519 0.832750368400
|
| 248 |
+
C 0.748464364365 0.750856301126 0.749278350757
|
| 249 |
+
C 0.916035098467 0.915989714547 0.749768849599
|
| 250 |
+
C 0.920250688280 0.750866310366 0.916926545513
|
| 251 |
+
C 0.750115894025 0.917713868933 0.919237614204
|
| 252 |
+
|
| 253 |
+
K_POINTS automatic
|
| 254 |
+
3 3 3 0 0 0
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_005_s-0.010/calc.py
ADDED
|
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
from HPRO import PW2AOkernel
|
| 2 |
+
|
| 3 |
+
kernel = PW2AOkernel(
|
| 4 |
+
lcao_interface='siesta',
|
| 5 |
+
lcaodata_root='../../../aobasis',
|
| 6 |
+
hrdata_interface='qe-bgw',
|
| 7 |
+
vscdir='./VSC',
|
| 8 |
+
upfdir='../../../pseudo',
|
| 9 |
+
ecutwfn=30,
|
| 10 |
+
)
|
| 11 |
+
kernel.run_pw2ao_rs('./aohamiltonian')
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_005_s-0.010/meta.release.json
ADDED
|
@@ -0,0 +1,9 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"dataset": "raman_v3_308",
|
| 3 |
+
"frame_id": "strain_iso/frame_005_s-0.010",
|
| 4 |
+
"has_aohamiltonian": true,
|
| 5 |
+
"has_ki_hamiltonian": false,
|
| 6 |
+
"has_overlap": true,
|
| 7 |
+
"source_path": "/capstor/scratch/cscs/apoliukh/diamond_new_data/data/strain_iso/frame_005_s-0.010",
|
| 8 |
+
"tier": "strain_iso"
|
| 9 |
+
}
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_005_s-0.010/pw2bgw.in
ADDED
|
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&input_pw2bgw
|
| 2 |
+
prefix = 'siso005'
|
| 3 |
+
outdir = './tmp'
|
| 4 |
+
real_or_complex = 2
|
| 5 |
+
wfng_flag = .false.
|
| 6 |
+
rhog_flag = .false.
|
| 7 |
+
vxcg_flag = .false.
|
| 8 |
+
vscg_flag = .true.
|
| 9 |
+
vscg_file = 'VSC'
|
| 10 |
+
vkbg_flag = .false.
|
| 11 |
+
/
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_005_s-0.010/scf.in
ADDED
|
@@ -0,0 +1,254 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
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|
|
|
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|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
prefix = 'siso005'
|
| 4 |
+
pseudo_dir = '../../../pseudo'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
tprnfor = .true.
|
| 7 |
+
tstress = .true.
|
| 8 |
+
/
|
| 9 |
+
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ibrav = 0
|
| 12 |
+
nat = 216
|
| 13 |
+
ntyp = 1
|
| 14 |
+
ecutwfc = 80.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
nbnd = 512
|
| 17 |
+
occupations = 'fixed'
|
| 18 |
+
/
|
| 19 |
+
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
diagonalization = 'david'
|
| 22 |
+
mixing_mode = 'plain'
|
| 23 |
+
mixing_beta = 0.7
|
| 24 |
+
conv_thr = 1e-13
|
| 25 |
+
/
|
| 26 |
+
|
| 27 |
+
CELL_PARAMETERS angstrom
|
| 28 |
+
10.593990000000 0.000000000000 0.000000000000
|
| 29 |
+
0.000000000000 10.593990000000 0.000000000000
|
| 30 |
+
0.000000000000 0.000000000000 10.593990000000
|
| 31 |
+
|
| 32 |
+
ATOMIC_SPECIES
|
| 33 |
+
C 12.011 C-PBE-NLCC.upf
|
| 34 |
+
|
| 35 |
+
ATOMIC_POSITIONS crystal
|
| 36 |
+
C -0.000142951411 -0.004240720491 -0.000164828765
|
| 37 |
+
C 0.165729196833 0.168194637667 0.000851648462
|
| 38 |
+
C 0.163950351073 0.001151991638 0.166005796718
|
| 39 |
+
C -0.001441115212 0.165893096827 0.168886697237
|
| 40 |
+
C 0.084089203201 0.080934510584 0.081554214584
|
| 41 |
+
C 0.248688365718 0.253019815996 0.083534331341
|
| 42 |
+
C 0.248907118218 0.082958672671 0.250422612365
|
| 43 |
+
C 0.079952330011 0.249889987792 0.248515508943
|
| 44 |
+
C -0.001482304491 -0.000619258101 0.333664260862
|
| 45 |
+
C 0.166464405245 0.165338578405 0.331867118745
|
| 46 |
+
C 0.164357509516 0.000776828035 0.501187011338
|
| 47 |
+
C -0.001693270452 0.164998074196 0.498209263727
|
| 48 |
+
C 0.083418429263 0.083126478292 0.415232657696
|
| 49 |
+
C 0.250559268053 0.249769920407 0.417803950255
|
| 50 |
+
C 0.247666566584 0.082763630134 0.582172462170
|
| 51 |
+
C 0.085469545746 0.253418154926 0.582501050243
|
| 52 |
+
C 0.002081320580 0.001097233100 0.668502176928
|
| 53 |
+
C 0.165670551962 0.166118421045 0.669684895436
|
| 54 |
+
C 0.166761445187 0.002232575037 0.834543695242
|
| 55 |
+
C 0.000320421210 0.167227733186 0.834018885683
|
| 56 |
+
C 0.085239916318 0.085313132954 0.749506916920
|
| 57 |
+
C 0.251414430726 0.251270464720 0.750100460851
|
| 58 |
+
C 0.248481287481 0.081930418821 0.916539399066
|
| 59 |
+
C 0.083485610943 0.251266907400 0.918385873190
|
| 60 |
+
C 0.002315502096 0.333112408998 0.001683348136
|
| 61 |
+
C 0.170648365563 0.499847897132 -0.000052803289
|
| 62 |
+
C 0.167899276614 0.334612799570 0.163902467395
|
| 63 |
+
C -0.002274398461 0.501829920668 0.166368062221
|
| 64 |
+
C 0.084571301554 0.419643610777 0.081445909181
|
| 65 |
+
C 0.249296942001 0.583847919744 0.085737729658
|
| 66 |
+
C 0.251795569867 0.417144970626 0.250172970606
|
| 67 |
+
C 0.085510383153 0.586836646543 0.249286938804
|
| 68 |
+
C -0.000579333953 0.335190863648 0.332232356169
|
| 69 |
+
C 0.166576595948 0.500457970907 0.331921608608
|
| 70 |
+
C 0.167615196400 0.335822902799 0.501077983783
|
| 71 |
+
C -0.000643742094 0.499547626484 0.500030796600
|
| 72 |
+
C 0.081486102918 0.417994306169 0.418626693067
|
| 73 |
+
C 0.252279615856 0.581048140199 0.418331199077
|
| 74 |
+
C 0.248104748130 0.415060316256 0.584604454627
|
| 75 |
+
C 0.084607540337 0.580434940224 0.580958550732
|
| 76 |
+
C -0.001351600590 0.334189173387 0.667635547245
|
| 77 |
+
C 0.168289062560 0.498795601904 0.666773154987
|
| 78 |
+
C 0.165986803735 0.330513139271 0.830941613309
|
| 79 |
+
C -0.000825222111 0.502943522868 0.830433292181
|
| 80 |
+
C 0.084153493305 0.416084984430 0.748910031176
|
| 81 |
+
C 0.248508066534 0.582562783004 0.749223632206
|
| 82 |
+
C 0.254230551239 0.417923490825 0.917492217421
|
| 83 |
+
C 0.081783498447 0.584360542286 0.914032172957
|
| 84 |
+
C 0.001263125426 0.665244774638 0.000396508223
|
| 85 |
+
C 0.167715635439 0.834104638870 -0.000135953174
|
| 86 |
+
C 0.164920426726 0.666925216864 0.162879011261
|
| 87 |
+
C 0.002339274484 0.832624338862 0.170313991505
|
| 88 |
+
C 0.083381077360 0.750383759298 0.083824884837
|
| 89 |
+
C 0.251351705013 0.915293854759 0.084015005890
|
| 90 |
+
C 0.249255529773 0.751162548671 0.251532842962
|
| 91 |
+
C 0.084477440928 0.920541108853 0.249134943183
|
| 92 |
+
C 0.000630619132 0.662807217876 0.330007142908
|
| 93 |
+
C 0.165995524352 0.834260939192 0.332845419305
|
| 94 |
+
C 0.165446976970 0.666936801720 0.501371970876
|
| 95 |
+
C 0.001542143818 0.834289476163 0.497518949773
|
| 96 |
+
C 0.082365760582 0.752419661948 0.419849508477
|
| 97 |
+
C 0.249507048428 0.913041894496 0.420264993206
|
| 98 |
+
C 0.249458659819 0.752087089831 0.583011187449
|
| 99 |
+
C 0.084143976356 0.915530419834 0.582227717691
|
| 100 |
+
C -0.001091631394 0.667716615480 0.666473818784
|
| 101 |
+
C 0.164107136414 0.833608617595 0.667744862604
|
| 102 |
+
C 0.163890917440 0.667384181526 0.830589885041
|
| 103 |
+
C -0.001073021411 0.832562846021 0.833300062563
|
| 104 |
+
C 0.083206402475 0.752129658052 0.749507216829
|
| 105 |
+
C 0.251836864046 0.915294154126 0.752379338699
|
| 106 |
+
C 0.251365780171 0.750701394119 0.917156711159
|
| 107 |
+
C 0.084403608813 0.912048130928 0.918005993110
|
| 108 |
+
C 0.335024890166 0.001732883324 -0.002281968746
|
| 109 |
+
C 0.498659696944 0.167983527578 0.000248742630
|
| 110 |
+
C 0.501247711728 0.000591322305 0.166503778638
|
| 111 |
+
C 0.335893028115 0.167116799957 0.166648739075
|
| 112 |
+
C 0.413942698801 0.083769309389 0.085411417508
|
| 113 |
+
C 0.581521145050 0.252324496805 0.084160812423
|
| 114 |
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C 0.582440504573 0.083098468734 0.247210909685
|
| 115 |
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C 0.414955151941 0.248014965122 0.250835882159
|
| 116 |
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C 0.333371578537 0.000458853819 0.332934618171
|
| 117 |
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C 0.501135057308 0.167052263981 0.334316315610
|
| 118 |
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C 0.502211267697 -0.001062075410 0.497511210676
|
| 119 |
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C 0.331289121584 0.167327772493 0.500504261947
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| 120 |
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C 0.415231584153 0.085157782377 0.416904662159
|
| 121 |
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C 0.580269445673 0.249377362804 0.418269769600
|
| 122 |
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C 0.581622507184 0.084201468666 0.585113163437
|
| 123 |
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C 0.417469172964 0.249065899291 0.582142578177
|
| 124 |
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C 0.333121002236 -0.002158079722 0.671774044678
|
| 125 |
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C 0.499622969252 0.168588579690 0.669033699240
|
| 126 |
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C 0.499126203540 -0.000129148848 0.831657713416
|
| 127 |
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C 0.330909874446 0.167875967045 0.837510534383
|
| 128 |
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C 0.416844854871 0.082070118169 0.749318990879
|
| 129 |
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C 0.585071114379 0.251076929589 0.750530463916
|
| 130 |
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C 0.580903304099 0.084572906496 0.913495981938
|
| 131 |
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C 0.417512250368 0.247952943410 0.914488815473
|
| 132 |
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C 0.335773053898 0.333233572324 -0.001664399267
|
| 133 |
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C 0.502823672628 0.498417171551 -0.000267482722
|
| 134 |
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C 0.497654313379 0.330883190863 0.167851999551
|
| 135 |
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C 0.332317161010 0.499762711932 0.168417970516
|
| 136 |
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C 0.417653848399 0.414429270277 0.080177095582
|
| 137 |
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C 0.582621787982 0.583569943638 0.083068059366
|
| 138 |
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C 0.584924884309 0.412824401889 0.249768561044
|
| 139 |
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C 0.420334704904 0.584861564849 0.247193595931
|
| 140 |
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C 0.330641029694 0.337269269697 0.334264586452
|
| 141 |
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C 0.500293439027 0.500177570115 0.334713493828
|
| 142 |
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C 0.499728515842 0.334356390365 0.501581522224
|
| 143 |
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C 0.332390733685 0.502179581403 0.500259932203
|
| 144 |
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C 0.416728731162 0.418249264133 0.416925553055
|
| 145 |
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C 0.582766201336 0.583946269069 0.415814284000
|
| 146 |
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C 0.581465324400 0.414350551136 0.585074584981
|
| 147 |
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C 0.417928782034 0.584754316539 0.586778927638
|
| 148 |
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C 0.333485554444 0.334392306966 0.666675706300
|
| 149 |
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C 0.500924523645 0.500261980052 0.668326378870
|
| 150 |
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C 0.499749371945 0.333086145448 0.832749249882
|
| 151 |
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C 0.329013050931 0.500588118247 0.832405315136
|
| 152 |
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C 0.415561140233 0.418695705700 0.750869595178
|
| 153 |
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C 0.585444424028 0.583023108503 0.748785239296
|
| 154 |
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C 0.584272672939 0.417342911726 0.915028520260
|
| 155 |
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C 0.416437810532 0.583197240364 0.918662399366
|
| 156 |
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C 0.335048646411 0.665837141133 0.000821495049
|
| 157 |
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C 0.501797344742 0.832935369752 0.000657362034
|
| 158 |
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C 0.501647870021 0.666925745384 0.167009347220
|
| 159 |
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C 0.333892566920 0.834541692167 0.166975911246
|
| 160 |
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C 0.416191436735 0.750907198688 0.083441843926
|
| 161 |
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C 0.583922489620 0.915665814445 0.081274078846
|
| 162 |
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C 0.583400931002 0.750254008361 0.248072664292
|
| 163 |
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C 0.413962068700 0.915887593705 0.250025801928
|
| 164 |
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C 0.331262433777 0.666498558632 0.334030838766
|
| 165 |
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C 0.498522161107 0.831990983559 0.332035279643
|
| 166 |
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C 0.498793755801 0.669937077424 0.500166443492
|
| 167 |
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C 0.331910433903 0.833664970442 0.497352822262
|
| 168 |
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C 0.417560949346 0.750689784112 0.420117887831
|
| 169 |
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C 0.582642558412 0.917561904338 0.416351428421
|
| 170 |
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C 0.581022530363 0.750036920207 0.582393658039
|
| 171 |
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C 0.417664003491 0.916376703281 0.581462383099
|
| 172 |
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C 0.333639555507 0.663456120906 0.668526339590
|
| 173 |
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C 0.498650804831 0.836561337202 0.664438311838
|
| 174 |
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C 0.497071497416 0.664441818329 0.833575594677
|
| 175 |
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C 0.329528883862 0.831360070724 0.835069586788
|
| 176 |
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C 0.417775792794 0.748356982855 0.749944900449
|
| 177 |
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C 0.587015498312 0.915009242261 0.753444979620
|
| 178 |
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C 0.579805635697 0.751266577028 0.916564314157
|
| 179 |
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C 0.418724474203 0.914631387346 0.915619542797
|
| 180 |
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C 0.665597318955 0.000351297272 -0.001820904584
|
| 181 |
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C 0.834433734396 0.167134493263 0.002026914206
|
| 182 |
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C 0.838448129453 0.002304489205 0.164575325552
|
| 183 |
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C 0.667889672924 0.165187589970 0.164300083826
|
| 184 |
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C 0.751924006039 0.083540337867 0.082681365328
|
| 185 |
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C 0.916061846431 0.244608622225 0.080917522452
|
| 186 |
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C 0.919566910645 0.082724662712 0.251498193248
|
| 187 |
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C 0.748312053556 0.251426932986 0.249684029310
|
| 188 |
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C 0.669385624004 0.001290495348 0.332375414368
|
| 189 |
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C 0.834917216138 0.167131309596 0.333229506125
|
| 190 |
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C 0.836696875552 -0.001543933005 0.496518579217
|
| 191 |
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C 0.667641396562 0.170012095761 0.498075780537
|
| 192 |
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C 0.749836738884 0.083314812501 0.417002003309
|
| 193 |
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C 0.919063154369 0.252091200067 0.419487310489
|
| 194 |
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C 0.914688446331 0.084413082395 0.584205621891
|
| 195 |
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C 0.750244807703 0.249348144303 0.579822318622
|
| 196 |
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C 0.662614024437 0.000333806318 0.666538708259
|
| 197 |
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C 0.834263460185 0.168244834157 0.666877890937
|
| 198 |
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C 0.835419841924 0.002913964500 0.830893237872
|
| 199 |
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C 0.668669427519 0.163489639361 0.834071643888
|
| 200 |
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C 0.752821592120 0.082122238019 0.750140134594
|
| 201 |
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C 0.916650709928 0.248245853821 0.751863973940
|
| 202 |
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C 0.917286945324 0.082375810218 0.917365399054
|
| 203 |
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C 0.749376862368 0.253911073924 0.913110349005
|
| 204 |
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C 0.665059714986 0.337453917417 -0.000635842545
|
| 205 |
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C 0.834205134080 0.498031332545 -0.000352599496
|
| 206 |
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C 0.837978038332 0.333529652524 0.166373683677
|
| 207 |
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C 0.665128178623 0.500366384516 0.164662403292
|
| 208 |
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C 0.752346333721 0.416217435254 0.083574958675
|
| 209 |
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C 0.916493575359 0.582817429262 0.086074535823
|
| 210 |
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C 0.917522451745 0.417267065061 0.251390402799
|
| 211 |
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C 0.750185310476 0.583203807762 0.251075560616
|
| 212 |
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C 0.665563827143 0.333151993870 0.332808462709
|
| 213 |
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C 0.833481622873 0.498620112935 0.330481284610
|
| 214 |
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C 0.834136032014 0.333579902384 0.499613261955
|
| 215 |
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C 0.666350272190 0.499913574153 0.499013139041
|
| 216 |
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C 0.751250816936 0.414726062839 0.419063311618
|
| 217 |
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C 0.913779698951 0.581621948078 0.417714833353
|
| 218 |
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C 0.917480145304 0.419121873169 0.584827823917
|
| 219 |
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C 0.752947612438 0.582625984964 0.582133831286
|
| 220 |
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C 0.663935078134 0.331222016444 0.664855724940
|
| 221 |
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C 0.833709439680 0.498461551156 0.667611924225
|
| 222 |
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C 0.834782972784 0.332433024765 0.830332295758
|
| 223 |
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C 0.667507398667 0.496056540205 0.832989094877
|
| 224 |
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C 0.755240864526 0.417657222498 0.749814616607
|
| 225 |
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C 0.914879620184 0.579793019180 0.750905933041
|
| 226 |
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C 0.912979575308 0.416306313408 0.916646840210
|
| 227 |
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C 0.752191635273 0.584311898795 0.916889100661
|
| 228 |
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C 0.666329503306 0.664518497807 -0.000056180966
|
| 229 |
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C 0.836309351196 0.834679542272 0.003565561756
|
| 230 |
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C 0.830738100527 0.668663988787 0.169329971764
|
| 231 |
+
C 0.668616147561 0.832702446897 0.169002153831
|
| 232 |
+
C 0.748819090790 0.747928734737 0.081604199501
|
| 233 |
+
C 0.914008239668 0.917638269186 0.084477101289
|
| 234 |
+
C 0.917134788902 0.750394570235 0.248546099518
|
| 235 |
+
C 0.749313905122 0.913074827899 0.248590690397
|
| 236 |
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C 0.665861247189 0.665314826677 0.333430649493
|
| 237 |
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C 0.832146035215 0.832188571601 0.332851635058
|
| 238 |
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C 0.834054543673 0.663634248013 0.499443973450
|
| 239 |
+
C 0.667239787289 0.833517597634 0.500759199422
|
| 240 |
+
C 0.745773726068 0.748432150679 0.416702841181
|
| 241 |
+
C 0.917918266784 0.914208130186 0.413366287553
|
| 242 |
+
C 0.916631667197 0.747862176394 0.584296336161
|
| 243 |
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C 0.752220252243 0.915435861320 0.585328425874
|
| 244 |
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C 0.667808044800 0.665046151875 0.666890336605
|
| 245 |
+
C 0.832747836965 0.832931069229 0.668416879603
|
| 246 |
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C 0.836455720023 0.668063886255 0.833789570943
|
| 247 |
+
C 0.666085445879 0.834491990017 0.833160561517
|
| 248 |
+
C 0.748890843914 0.749120762797 0.750224303785
|
| 249 |
+
C 0.919509890255 0.918507048455 0.751352321198
|
| 250 |
+
C 0.917271256494 0.750705797775 0.918494938382
|
| 251 |
+
C 0.749454370553 0.917046482079 0.917603068107
|
| 252 |
+
|
| 253 |
+
K_POINTS automatic
|
| 254 |
+
3 3 3 0 0 0
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_008_s-0.005/calc.py
ADDED
|
@@ -0,0 +1,11 @@
|
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|
| 1 |
+
from HPRO import PW2AOkernel
|
| 2 |
+
|
| 3 |
+
kernel = PW2AOkernel(
|
| 4 |
+
lcao_interface='siesta',
|
| 5 |
+
lcaodata_root='../../../aobasis',
|
| 6 |
+
hrdata_interface='qe-bgw',
|
| 7 |
+
vscdir='./VSC',
|
| 8 |
+
upfdir='../../../pseudo',
|
| 9 |
+
ecutwfn=30,
|
| 10 |
+
)
|
| 11 |
+
kernel.run_pw2ao_rs('./aohamiltonian')
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_008_s-0.005/meta.release.json
ADDED
|
@@ -0,0 +1,9 @@
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|
|
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|
| 1 |
+
{
|
| 2 |
+
"dataset": "raman_v3_308",
|
| 3 |
+
"frame_id": "strain_iso/frame_008_s-0.005",
|
| 4 |
+
"has_aohamiltonian": true,
|
| 5 |
+
"has_ki_hamiltonian": false,
|
| 6 |
+
"has_overlap": true,
|
| 7 |
+
"source_path": "/capstor/scratch/cscs/apoliukh/diamond_new_data/data/strain_iso/frame_008_s-0.005",
|
| 8 |
+
"tier": "strain_iso"
|
| 9 |
+
}
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_008_s-0.005/pw2bgw.in
ADDED
|
@@ -0,0 +1,11 @@
|
|
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|
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|
|
|
|
|
|
| 1 |
+
&input_pw2bgw
|
| 2 |
+
prefix = 'siso008'
|
| 3 |
+
outdir = './tmp'
|
| 4 |
+
real_or_complex = 2
|
| 5 |
+
wfng_flag = .false.
|
| 6 |
+
rhog_flag = .false.
|
| 7 |
+
vxcg_flag = .false.
|
| 8 |
+
vscg_flag = .true.
|
| 9 |
+
vscg_file = 'VSC'
|
| 10 |
+
vkbg_flag = .false.
|
| 11 |
+
/
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_008_s-0.005/scf.in
ADDED
|
@@ -0,0 +1,254 @@
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|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
prefix = 'siso008'
|
| 4 |
+
pseudo_dir = '../../../pseudo'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
tprnfor = .true.
|
| 7 |
+
tstress = .true.
|
| 8 |
+
/
|
| 9 |
+
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ibrav = 0
|
| 12 |
+
nat = 216
|
| 13 |
+
ntyp = 1
|
| 14 |
+
ecutwfc = 80.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
nbnd = 512
|
| 17 |
+
occupations = 'fixed'
|
| 18 |
+
/
|
| 19 |
+
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
diagonalization = 'david'
|
| 22 |
+
mixing_mode = 'plain'
|
| 23 |
+
mixing_beta = 0.7
|
| 24 |
+
conv_thr = 1e-13
|
| 25 |
+
/
|
| 26 |
+
|
| 27 |
+
CELL_PARAMETERS angstrom
|
| 28 |
+
10.647495000000 0.000000000000 0.000000000000
|
| 29 |
+
0.000000000000 10.647495000000 0.000000000000
|
| 30 |
+
0.000000000000 0.000000000000 10.647495000000
|
| 31 |
+
|
| 32 |
+
ATOMIC_SPECIES
|
| 33 |
+
C 12.011 C-PBE-NLCC.upf
|
| 34 |
+
|
| 35 |
+
ATOMIC_POSITIONS crystal
|
| 36 |
+
C -0.001976081053 0.000011158973 -0.000447382033
|
| 37 |
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| 38 |
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C 0.167559359720 0.000757224076 0.166576190556
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| 39 |
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C -0.001400270049 0.167107865708 0.164209064044
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| 40 |
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C 0.086256834376 0.080545138617 0.084330233302
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| 41 |
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C 0.250715094215 0.249501205872 0.083557622673
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| 42 |
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C 0.250335193065 0.084684709227 0.252664587799
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| 43 |
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C 0.080127593537 0.252647970413 0.251197896629
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| 44 |
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C 0.002829498277 0.000236394206 0.335044980478
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| 45 |
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| 46 |
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C 0.165596396645 -0.001218951622 0.499779007336
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| 47 |
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| 48 |
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| 50 |
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| 51 |
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| 52 |
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C 0.665875688408 0.665866261415 0.335674232741
|
| 237 |
+
C 0.834367829637 0.835444596578 0.334581664251
|
| 238 |
+
C 0.831622612045 0.669172659942 0.503418447675
|
| 239 |
+
C 0.663663985962 0.833237661247 0.499480171395
|
| 240 |
+
C 0.750705760981 0.750240989372 0.416050402868
|
| 241 |
+
C 0.917178395300 0.914304569647 0.416569221070
|
| 242 |
+
C 0.921406352484 0.748739807550 0.581986932147
|
| 243 |
+
C 0.753302547753 0.915919883219 0.583472467471
|
| 244 |
+
C 0.669437857255 0.668249634839 0.668714235053
|
| 245 |
+
C 0.834640882714 0.829507220108 0.669041040356
|
| 246 |
+
C 0.833630273615 0.664010915354 0.828092014171
|
| 247 |
+
C 0.667481890697 0.834341456543 0.835009418279
|
| 248 |
+
C 0.753101142470 0.747931627760 0.746480739080
|
| 249 |
+
C 0.913020535286 0.918148232098 0.754507684431
|
| 250 |
+
C 0.913635671139 0.750518070160 0.917269940493
|
| 251 |
+
C 0.748657962495 0.914853030955 0.916323912593
|
| 252 |
+
|
| 253 |
+
K_POINTS automatic
|
| 254 |
+
3 3 3 0 0 0
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_010_s-0.005/calc.py
ADDED
|
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
from HPRO import PW2AOkernel
|
| 2 |
+
|
| 3 |
+
kernel = PW2AOkernel(
|
| 4 |
+
lcao_interface='siesta',
|
| 5 |
+
lcaodata_root='../../../aobasis',
|
| 6 |
+
hrdata_interface='qe-bgw',
|
| 7 |
+
vscdir='./VSC',
|
| 8 |
+
upfdir='../../../pseudo',
|
| 9 |
+
ecutwfn=30,
|
| 10 |
+
)
|
| 11 |
+
kernel.run_pw2ao_rs('./aohamiltonian')
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_010_s-0.005/meta.release.json
ADDED
|
@@ -0,0 +1,9 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"dataset": "raman_v3_308",
|
| 3 |
+
"frame_id": "strain_iso/frame_010_s-0.005",
|
| 4 |
+
"has_aohamiltonian": true,
|
| 5 |
+
"has_ki_hamiltonian": false,
|
| 6 |
+
"has_overlap": true,
|
| 7 |
+
"source_path": "/capstor/scratch/cscs/apoliukh/diamond_new_data/data/strain_iso/frame_010_s-0.005",
|
| 8 |
+
"tier": "strain_iso"
|
| 9 |
+
}
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_010_s-0.005/pw2bgw.in
ADDED
|
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&input_pw2bgw
|
| 2 |
+
prefix = 'siso010'
|
| 3 |
+
outdir = './tmp'
|
| 4 |
+
real_or_complex = 2
|
| 5 |
+
wfng_flag = .false.
|
| 6 |
+
rhog_flag = .false.
|
| 7 |
+
vxcg_flag = .false.
|
| 8 |
+
vscg_flag = .true.
|
| 9 |
+
vscg_file = 'VSC'
|
| 10 |
+
vkbg_flag = .false.
|
| 11 |
+
/
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_010_s-0.005/scf.in
ADDED
|
@@ -0,0 +1,254 @@
|
|
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|
|
|
|
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|
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|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
prefix = 'siso010'
|
| 4 |
+
pseudo_dir = '../../../pseudo'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
tprnfor = .true.
|
| 7 |
+
tstress = .true.
|
| 8 |
+
/
|
| 9 |
+
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ibrav = 0
|
| 12 |
+
nat = 216
|
| 13 |
+
ntyp = 1
|
| 14 |
+
ecutwfc = 80.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
nbnd = 512
|
| 17 |
+
occupations = 'fixed'
|
| 18 |
+
/
|
| 19 |
+
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
diagonalization = 'david'
|
| 22 |
+
mixing_mode = 'plain'
|
| 23 |
+
mixing_beta = 0.7
|
| 24 |
+
conv_thr = 1e-13
|
| 25 |
+
/
|
| 26 |
+
|
| 27 |
+
CELL_PARAMETERS angstrom
|
| 28 |
+
10.647495000000 0.000000000000 0.000000000000
|
| 29 |
+
0.000000000000 10.647495000000 0.000000000000
|
| 30 |
+
0.000000000000 0.000000000000 10.647495000000
|
| 31 |
+
|
| 32 |
+
ATOMIC_SPECIES
|
| 33 |
+
C 12.011 C-PBE-NLCC.upf
|
| 34 |
+
|
| 35 |
+
ATOMIC_POSITIONS crystal
|
| 36 |
+
C 0.001512199700 -0.001632763499 -0.000964290673
|
| 37 |
+
C 0.165393842544 0.167728235910 0.001249356493
|
| 38 |
+
C 0.165909325988 0.001327973131 0.166632844088
|
| 39 |
+
C 0.000253938922 0.166542794446 0.165335581256
|
| 40 |
+
C 0.081135219790 0.079668204375 0.083311652746
|
| 41 |
+
C 0.251190263355 0.248346593770 0.081805583830
|
| 42 |
+
C 0.249790919882 0.081281364139 0.246711150358
|
| 43 |
+
C 0.083402572854 0.250176560293 0.249789057004
|
| 44 |
+
C -0.000529620824 -0.001756401416 0.334263627479
|
| 45 |
+
C 0.166126608971 0.167375131338 0.330935273299
|
| 46 |
+
C 0.165957839057 0.000624249228 0.501654119571
|
| 47 |
+
C -0.000863378108 0.165407739355 0.499005209354
|
| 48 |
+
C 0.085067357003 0.082286432896 0.413771394226
|
| 49 |
+
C 0.249082682710 0.251316706136 0.415540687938
|
| 50 |
+
C 0.248956376141 0.082028833275 0.589085824744
|
| 51 |
+
C 0.082447747189 0.249777395211 0.585830649746
|
| 52 |
+
C -0.000251151370 -0.002569494995 0.667975383550
|
| 53 |
+
C 0.169080650764 0.167281492288 0.665890003451
|
| 54 |
+
C 0.165532139004 0.001208281586 0.834356450553
|
| 55 |
+
C 0.002011794340 0.164343135536 0.834001253153
|
| 56 |
+
C 0.080849273492 0.082964483835 0.748822501565
|
| 57 |
+
C 0.251429063647 0.247312640815 0.749989144000
|
| 58 |
+
C 0.249932309123 0.082866188426 0.913375726917
|
| 59 |
+
C 0.086552457196 0.253410322916 0.917035620365
|
| 60 |
+
C 0.001694995722 0.332703271284 0.001227472841
|
| 61 |
+
C 0.163085312295 0.496755816090 0.002940355710
|
| 62 |
+
C 0.168925005034 0.334671552305 0.169490422491
|
| 63 |
+
C -0.001524501817 0.500829551752 0.165728230480
|
| 64 |
+
C 0.081634270209 0.415845802389 0.082358302581
|
| 65 |
+
C 0.251737669930 0.584616514825 0.086189633461
|
| 66 |
+
C 0.251782879869 0.422498775069 0.246914813029
|
| 67 |
+
C 0.082917891940 0.584072293498 0.248969086958
|
| 68 |
+
C 0.000774366603 0.335468502737 0.332116976692
|
| 69 |
+
C 0.167138761470 0.500037471212 0.336087470960
|
| 70 |
+
C 0.167197802648 0.334690438865 0.505124708656
|
| 71 |
+
C 0.000663620465 0.500909332851 0.502710415013
|
| 72 |
+
C 0.084914049082 0.418137183892 0.415974982850
|
| 73 |
+
C 0.250657114653 0.585072313721 0.415749356434
|
| 74 |
+
C 0.250130404705 0.417521169709 0.582459361303
|
| 75 |
+
C 0.083092568424 0.585178722768 0.584671633306
|
| 76 |
+
C -0.001963843033 0.333014948152 0.667718531236
|
| 77 |
+
C 0.167683153736 0.499130441445 0.666577118335
|
| 78 |
+
C 0.163148203914 0.333611103079 0.833739560146
|
| 79 |
+
C -0.000315243572 0.503336542034 0.832790579116
|
| 80 |
+
C 0.084857502429 0.416191544856 0.746021492534
|
| 81 |
+
C 0.249899235807 0.582017910975 0.747263773622
|
| 82 |
+
C 0.250317868806 0.416955999055 0.918471962738
|
| 83 |
+
C 0.082898244930 0.584107452342 0.917898439662
|
| 84 |
+
C 0.002799624864 0.667896678332 0.000296246434
|
| 85 |
+
C 0.171429740500 0.833874804512 0.000441965566
|
| 86 |
+
C 0.163989996001 0.666329973954 0.164328259793
|
| 87 |
+
C -0.002540064041 0.834611538628 0.165616976127
|
| 88 |
+
C 0.082398945501 0.750428678248 0.084085577604
|
| 89 |
+
C 0.249096073339 0.916289469670 0.084750842765
|
| 90 |
+
C 0.246674075986 0.751427075284 0.250759679204
|
| 91 |
+
C 0.084271159281 0.919711333510 0.250151601485
|
| 92 |
+
C 0.000154811785 0.667603600000 0.332492596565
|
| 93 |
+
C 0.163631406339 0.834709206585 0.334514856101
|
| 94 |
+
C 0.168266647728 0.666959982726 0.499148096709
|
| 95 |
+
C 0.001122135856 0.835392907266 0.501258001387
|
| 96 |
+
C 0.082550571423 0.747365729654 0.416445058735
|
| 97 |
+
C 0.250373319797 0.917176878053 0.416860623721
|
| 98 |
+
C 0.251437864516 0.750747411659 0.579317158633
|
| 99 |
+
C 0.082968451069 0.917431050962 0.584155250308
|
| 100 |
+
C -0.000017851009 0.667317555131 0.664912683330
|
| 101 |
+
C 0.166397602548 0.836898087226 0.664427171246
|
| 102 |
+
C 0.167581948115 0.666330383956 0.834136485448
|
| 103 |
+
C -0.001134616711 0.832278016532 0.827697961150
|
| 104 |
+
C 0.082437275588 0.747864425966 0.747330728788
|
| 105 |
+
C 0.252021237068 0.912274900158 0.750995155788
|
| 106 |
+
C 0.250702138847 0.747483989163 0.917874995781
|
| 107 |
+
C 0.080323648921 0.916172075167 0.913775869023
|
| 108 |
+
C 0.331641086347 0.002941193859 -0.003193826360
|
| 109 |
+
C 0.496065319346 0.163954195747 -0.000706144305
|
| 110 |
+
C 0.499195163605 0.003054574207 0.164717237794
|
| 111 |
+
C 0.331089213339 0.168731033059 0.162262326967
|
| 112 |
+
C 0.416934090490 0.085367259642 0.083936618373
|
| 113 |
+
C 0.585695242767 0.249934982594 0.082397309641
|
| 114 |
+
C 0.583763404714 0.080697810975 0.248528879152
|
| 115 |
+
C 0.418719120636 0.251127527104 0.251625108207
|
| 116 |
+
C 0.332006156388 -0.002663004547 0.333874985707
|
| 117 |
+
C 0.501702259438 0.167187918647 0.334319762893
|
| 118 |
+
C 0.501809288950 -0.002021025727 0.500448853552
|
| 119 |
+
C 0.332201410112 0.164906522046 0.497575967053
|
| 120 |
+
C 0.418447546004 0.083664101758 0.417612645622
|
| 121 |
+
C 0.583254506041 0.250984873078 0.415841106908
|
| 122 |
+
C 0.584820749367 0.084640558956 0.584057561656
|
| 123 |
+
C 0.414947500240 0.248404567927 0.580218615136
|
| 124 |
+
C 0.331196836177 0.000300262311 0.665413087205
|
| 125 |
+
C 0.498971354536 0.164785410662 0.664898445430
|
| 126 |
+
C 0.499570885341 -0.002968772443 0.835515951743
|
| 127 |
+
C 0.333994168876 0.167169077270 0.831930483207
|
| 128 |
+
C 0.416498628179 0.083059866366 0.748542743775
|
| 129 |
+
C 0.581852498939 0.246085691745 0.748292242133
|
| 130 |
+
C 0.582781345227 0.081024067378 0.918604435286
|
| 131 |
+
C 0.415659523769 0.251217956712 0.917693640161
|
| 132 |
+
C 0.333447501362 0.332237354213 0.000456088522
|
| 133 |
+
C 0.501074879854 0.499719632704 0.001702389391
|
| 134 |
+
C 0.503841654478 0.331421845843 0.169939519001
|
| 135 |
+
C 0.334727823240 0.497307658922 0.166675159734
|
| 136 |
+
C 0.417460678791 0.419264668865 0.088904324907
|
| 137 |
+
C 0.585246509531 0.584179304694 0.083755591308
|
| 138 |
+
C 0.583954048997 0.414336366489 0.250781287279
|
| 139 |
+
C 0.414586595647 0.584127930429 0.251868211340
|
| 140 |
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C 0.333587554672 0.332817848969 0.331398182488
|
| 141 |
+
C 0.503127251608 0.499666908344 0.331022553354
|
| 142 |
+
C 0.499489386863 0.335319486000 0.498934753715
|
| 143 |
+
C 0.333267408454 0.499782603664 0.502433344193
|
| 144 |
+
C 0.413793659315 0.417615492690 0.417000516517
|
| 145 |
+
C 0.586246341954 0.582530667648 0.415111933265
|
| 146 |
+
C 0.583997143313 0.416230355202 0.584140980157
|
| 147 |
+
C 0.417955976219 0.584830415035 0.581849603488
|
| 148 |
+
C 0.334751824105 0.338012289201 0.665108043645
|
| 149 |
+
C 0.502063034048 0.504156421325 0.666238276029
|
| 150 |
+
C 0.503415230231 0.332379211326 0.831048509110
|
| 151 |
+
C 0.331076949017 0.503326701392 0.837474803119
|
| 152 |
+
C 0.419538772506 0.420480402632 0.750712398486
|
| 153 |
+
C 0.586414925746 0.584472733555 0.752363236208
|
| 154 |
+
C 0.583137693304 0.415319356954 0.915264927791
|
| 155 |
+
C 0.416868192686 0.585824460471 0.916800578156
|
| 156 |
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C 0.333704191331 0.667986455271 0.002127645847
|
| 157 |
+
C 0.502487897880 0.833292466305 0.000068528965
|
| 158 |
+
C 0.498366572124 0.667617460911 0.168908496949
|
| 159 |
+
C 0.332923645985 0.830876368522 0.166390178985
|
| 160 |
+
C 0.416582457995 0.750996510976 0.082473549803
|
| 161 |
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C 0.582438481179 0.916811697552 0.082757852341
|
| 162 |
+
C 0.584014146640 0.751136470604 0.250865640582
|
| 163 |
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C 0.418001512733 0.917947892267 0.248174484588
|
| 164 |
+
C 0.334693141166 0.667570576999 0.335295944379
|
| 165 |
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C 0.499979721952 0.833610220759 0.331635348838
|
| 166 |
+
C 0.498977730945 0.666061264532 0.499351180756
|
| 167 |
+
C 0.334006220212 0.833690551587 0.501518568840
|
| 168 |
+
C 0.415518803667 0.748612046137 0.416495837062
|
| 169 |
+
C 0.583904501626 0.914980593669 0.414052517732
|
| 170 |
+
C 0.583365797745 0.750314622330 0.585228296178
|
| 171 |
+
C 0.416340875980 0.919311570877 0.582005089765
|
| 172 |
+
C 0.334415183618 0.666904146228 0.662595265783
|
| 173 |
+
C 0.499789816933 0.832828251966 0.669634442896
|
| 174 |
+
C 0.498076024593 0.665390811795 0.831055447431
|
| 175 |
+
C 0.336890241624 0.834168493120 0.835132403239
|
| 176 |
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C 0.417172534219 0.751394671861 0.747040167098
|
| 177 |
+
C 0.583667064572 0.914003702631 0.751280984400
|
| 178 |
+
C 0.586598472892 0.751136291177 0.917081579440
|
| 179 |
+
C 0.414723558493 0.915426548004 0.916624161271
|
| 180 |
+
C 0.664968215558 -0.001219273111 -0.003126259106
|
| 181 |
+
C 0.835956135757 0.165177707724 -0.002205562024
|
| 182 |
+
C 0.833554080579 -0.001376212617 0.165981688848
|
| 183 |
+
C 0.667798881528 0.168007190392 0.163193527732
|
| 184 |
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C 0.752734847417 0.081882566093 0.082516616926
|
| 185 |
+
C 0.914330646867 0.251397495562 0.083496082605
|
| 186 |
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C 0.916987763842 0.085462094253 0.248601803388
|
| 187 |
+
C 0.749927529698 0.247191846907 0.250893489326
|
| 188 |
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C 0.664515236006 -0.001588373158 0.332429850840
|
| 189 |
+
C 0.830279838251 0.165579805309 0.332427504425
|
| 190 |
+
C 0.833995645786 0.002847612738 0.501667380409
|
| 191 |
+
C 0.664909185459 0.165728245266 0.499751214503
|
| 192 |
+
C 0.749263930365 0.080976069333 0.417017714240
|
| 193 |
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C 0.918303619167 0.248647846742 0.412729293869
|
| 194 |
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C 0.914232354538 0.083707337412 0.583101017271
|
| 195 |
+
C 0.749463450832 0.249448827276 0.584325864497
|
| 196 |
+
C 0.666025132703 -0.003895229771 0.670743328769
|
| 197 |
+
C 0.834845910703 0.164991857318 0.663634374265
|
| 198 |
+
C 0.832770181744 0.001773876379 0.836723475661
|
| 199 |
+
C 0.665781994187 0.166437220285 0.834137473199
|
| 200 |
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C 0.749554089112 0.084793114561 0.752965842156
|
| 201 |
+
C 0.920475188442 0.248930221399 0.751900972739
|
| 202 |
+
C 0.913306182413 0.083334642149 0.916180718538
|
| 203 |
+
C 0.749670485411 0.247837652465 0.917441495252
|
| 204 |
+
C 0.665450693716 0.333907483483 -0.000152580895
|
| 205 |
+
C 0.834153445523 0.499649611907 0.002888035344
|
| 206 |
+
C 0.832279321732 0.332680834504 0.166335736962
|
| 207 |
+
C 0.669003978081 0.500611884132 0.165998607551
|
| 208 |
+
C 0.749966688770 0.416146187483 0.080244720566
|
| 209 |
+
C 0.915418006527 0.584242739895 0.084470527396
|
| 210 |
+
C 0.914907346916 0.417464840810 0.249796175934
|
| 211 |
+
C 0.749438901953 0.586032931881 0.248292886507
|
| 212 |
+
C 0.665643342124 0.332100605771 0.334512491833
|
| 213 |
+
C 0.834152952643 0.499731303576 0.333111118991
|
| 214 |
+
C 0.835542566210 0.333509571994 0.501888046987
|
| 215 |
+
C 0.664246250018 0.503261778598 0.499352363022
|
| 216 |
+
C 0.749835175703 0.416914982493 0.412236491726
|
| 217 |
+
C 0.916730331985 0.584190402674 0.421084328472
|
| 218 |
+
C 0.916502930450 0.416257875553 0.582867136364
|
| 219 |
+
C 0.747940405897 0.581224341895 0.582210977089
|
| 220 |
+
C 0.665938800845 0.330671134682 0.666844374090
|
| 221 |
+
C 0.832207755218 0.498313555287 0.667502541766
|
| 222 |
+
C 0.834358625263 0.334370333167 0.834674137774
|
| 223 |
+
C 0.664636586393 0.500603323307 0.831993861818
|
| 224 |
+
C 0.746413407389 0.418290346514 0.749256014161
|
| 225 |
+
C 0.914893302210 0.582973651241 0.752914641127
|
| 226 |
+
C 0.917604402982 0.416051871430 0.919065464944
|
| 227 |
+
C 0.754494475189 0.587728378480 0.920888184113
|
| 228 |
+
C 0.669429740337 0.661527931611 0.000572618566
|
| 229 |
+
C 0.833594245346 0.831379302712 -0.001325946300
|
| 230 |
+
C 0.834597563955 0.666530601664 0.164924389378
|
| 231 |
+
C 0.666345220685 0.831495164671 0.166713604899
|
| 232 |
+
C 0.750470748218 0.751094942629 0.086613160326
|
| 233 |
+
C 0.917439481588 0.915490205643 0.085268134411
|
| 234 |
+
C 0.918465782010 0.748785755993 0.251157873896
|
| 235 |
+
C 0.748578212265 0.916532446829 0.249682708368
|
| 236 |
+
C 0.667986122032 0.666224327710 0.335573838104
|
| 237 |
+
C 0.833485579817 0.835974797679 0.335534812399
|
| 238 |
+
C 0.832495743333 0.669084876015 0.502236791139
|
| 239 |
+
C 0.670855672855 0.835527861639 0.501999478831
|
| 240 |
+
C 0.750507731896 0.753061149704 0.416313229188
|
| 241 |
+
C 0.918957105564 0.916308067305 0.414909925596
|
| 242 |
+
C 0.917609594979 0.751486177417 0.583045358204
|
| 243 |
+
C 0.746357271077 0.920186885698 0.577904925385
|
| 244 |
+
C 0.663966481316 0.668325154505 0.667730214569
|
| 245 |
+
C 0.835142249084 0.830333302544 0.669435371342
|
| 246 |
+
C 0.834498467842 0.667492559177 0.834451502636
|
| 247 |
+
C 0.666762803114 0.829798126562 0.828653627828
|
| 248 |
+
C 0.750285280366 0.746790162957 0.749254256521
|
| 249 |
+
C 0.910897534585 0.914030089426 0.749688620002
|
| 250 |
+
C 0.919881599866 0.746773279413 0.915230871483
|
| 251 |
+
C 0.749632296646 0.919840378656 0.916477557709
|
| 252 |
+
|
| 253 |
+
K_POINTS automatic
|
| 254 |
+
3 3 3 0 0 0
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_012_s+0.005/calc.py
ADDED
|
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
from HPRO import PW2AOkernel
|
| 2 |
+
|
| 3 |
+
kernel = PW2AOkernel(
|
| 4 |
+
lcao_interface='siesta',
|
| 5 |
+
lcaodata_root='../../../aobasis',
|
| 6 |
+
hrdata_interface='qe-bgw',
|
| 7 |
+
vscdir='./VSC',
|
| 8 |
+
upfdir='../../../pseudo',
|
| 9 |
+
ecutwfn=30,
|
| 10 |
+
)
|
| 11 |
+
kernel.run_pw2ao_rs('./aohamiltonian')
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_012_s+0.005/meta.release.json
ADDED
|
@@ -0,0 +1,9 @@
|
|
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|
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|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"dataset": "raman_v3_308",
|
| 3 |
+
"frame_id": "strain_iso/frame_012_s+0.005",
|
| 4 |
+
"has_aohamiltonian": true,
|
| 5 |
+
"has_ki_hamiltonian": false,
|
| 6 |
+
"has_overlap": true,
|
| 7 |
+
"source_path": "/capstor/scratch/cscs/apoliukh/diamond_new_data/data/strain_iso/frame_012_s+0.005",
|
| 8 |
+
"tier": "strain_iso"
|
| 9 |
+
}
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_012_s+0.005/pw2bgw.in
ADDED
|
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
| 1 |
+
&input_pw2bgw
|
| 2 |
+
prefix = 'siso012'
|
| 3 |
+
outdir = './tmp'
|
| 4 |
+
real_or_complex = 2
|
| 5 |
+
wfng_flag = .false.
|
| 6 |
+
rhog_flag = .false.
|
| 7 |
+
vxcg_flag = .false.
|
| 8 |
+
vscg_flag = .true.
|
| 9 |
+
vscg_file = 'VSC'
|
| 10 |
+
vkbg_flag = .false.
|
| 11 |
+
/
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_012_s+0.005/scf.in
ADDED
|
@@ -0,0 +1,254 @@
|
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|
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|
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|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
|
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|
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|
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|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
prefix = 'siso012'
|
| 4 |
+
pseudo_dir = '../../../pseudo'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
tprnfor = .true.
|
| 7 |
+
tstress = .true.
|
| 8 |
+
/
|
| 9 |
+
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ibrav = 0
|
| 12 |
+
nat = 216
|
| 13 |
+
ntyp = 1
|
| 14 |
+
ecutwfc = 80.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
nbnd = 512
|
| 17 |
+
occupations = 'fixed'
|
| 18 |
+
/
|
| 19 |
+
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
diagonalization = 'david'
|
| 22 |
+
mixing_mode = 'plain'
|
| 23 |
+
mixing_beta = 0.7
|
| 24 |
+
conv_thr = 1e-13
|
| 25 |
+
/
|
| 26 |
+
|
| 27 |
+
CELL_PARAMETERS angstrom
|
| 28 |
+
10.754505000000 0.000000000000 0.000000000000
|
| 29 |
+
0.000000000000 10.754505000000 0.000000000000
|
| 30 |
+
0.000000000000 0.000000000000 10.754505000000
|
| 31 |
+
|
| 32 |
+
ATOMIC_SPECIES
|
| 33 |
+
C 12.011 C-PBE-NLCC.upf
|
| 34 |
+
|
| 35 |
+
ATOMIC_POSITIONS crystal
|
| 36 |
+
C 0.002303481360 -0.001419912665 0.001235640254
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| 37 |
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C 0.164827320280 0.171165777810 0.000869223667
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| 38 |
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C 0.167385004305 0.001124449910 0.166608864673
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| 39 |
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C -0.000307663905 0.169499926090 0.169810753249
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| 40 |
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C 0.081597363106 0.079667458829 0.082397329418
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| 41 |
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C 0.246692336630 0.247491359993 0.081921034133
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| 42 |
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C 0.249118979490 0.082095372421 0.249877699799
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| 43 |
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C 0.082202980183 0.250137193603 0.252556261166
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| 44 |
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C 0.002300592713 0.001561408898 0.333240638399
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| 45 |
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C 0.168442891742 0.166097683132 0.330713539293
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| 46 |
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C 0.165532801379 0.002265291707 0.499068531662
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| 47 |
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C -0.002100324315 0.168683729259 0.501754008612
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| 48 |
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C 0.082757764266 0.081761753612 0.414033219416
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C 0.250458246624 0.247442857189 0.416642222046
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| 50 |
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C 0.251062331889 0.084844069270 0.580102625783
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C 0.581449392535 0.247942882407 0.083598457390
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| 253 |
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K_POINTS automatic
|
| 254 |
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3 3 3 0 0 0
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_016_s+0.010/calc.py
ADDED
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| 1 |
+
from HPRO import PW2AOkernel
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| 2 |
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| 3 |
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kernel = PW2AOkernel(
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| 4 |
+
lcao_interface='siesta',
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| 5 |
+
lcaodata_root='../../../aobasis',
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| 6 |
+
hrdata_interface='qe-bgw',
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| 7 |
+
vscdir='./VSC',
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| 8 |
+
upfdir='../../../pseudo',
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| 9 |
+
ecutwfn=30,
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| 10 |
+
)
|
| 11 |
+
kernel.run_pw2ao_rs('./aohamiltonian')
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releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_016_s+0.010/meta.release.json
ADDED
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@@ -0,0 +1,9 @@
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{
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| 2 |
+
"dataset": "raman_v3_308",
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| 3 |
+
"frame_id": "strain_iso/frame_016_s+0.010",
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| 4 |
+
"has_aohamiltonian": true,
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| 5 |
+
"has_ki_hamiltonian": false,
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| 6 |
+
"has_overlap": true,
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| 7 |
+
"source_path": "/capstor/scratch/cscs/apoliukh/diamond_new_data/data/strain_iso/frame_016_s+0.010",
|
| 8 |
+
"tier": "strain_iso"
|
| 9 |
+
}
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releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_016_s+0.010/pw2bgw.in
ADDED
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@@ -0,0 +1,11 @@
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| 1 |
+
&input_pw2bgw
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| 2 |
+
prefix = 'siso016'
|
| 3 |
+
outdir = './tmp'
|
| 4 |
+
real_or_complex = 2
|
| 5 |
+
wfng_flag = .false.
|
| 6 |
+
rhog_flag = .false.
|
| 7 |
+
vxcg_flag = .false.
|
| 8 |
+
vscg_flag = .true.
|
| 9 |
+
vscg_file = 'VSC'
|
| 10 |
+
vkbg_flag = .false.
|
| 11 |
+
/
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releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_016_s+0.010/scf.in
ADDED
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@@ -0,0 +1,254 @@
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
prefix = 'siso016'
|
| 4 |
+
pseudo_dir = '../../../pseudo'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
tprnfor = .true.
|
| 7 |
+
tstress = .true.
|
| 8 |
+
/
|
| 9 |
+
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ibrav = 0
|
| 12 |
+
nat = 216
|
| 13 |
+
ntyp = 1
|
| 14 |
+
ecutwfc = 80.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
nbnd = 512
|
| 17 |
+
occupations = 'fixed'
|
| 18 |
+
/
|
| 19 |
+
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
diagonalization = 'david'
|
| 22 |
+
mixing_mode = 'plain'
|
| 23 |
+
mixing_beta = 0.7
|
| 24 |
+
conv_thr = 1e-13
|
| 25 |
+
/
|
| 26 |
+
|
| 27 |
+
CELL_PARAMETERS angstrom
|
| 28 |
+
10.808010000000 0.000000000000 0.000000000000
|
| 29 |
+
0.000000000000 10.808010000000 0.000000000000
|
| 30 |
+
0.000000000000 0.000000000000 10.808010000000
|
| 31 |
+
|
| 32 |
+
ATOMIC_SPECIES
|
| 33 |
+
C 12.011 C-PBE-NLCC.upf
|
| 34 |
+
|
| 35 |
+
ATOMIC_POSITIONS crystal
|
| 36 |
+
C 0.002151295887 -0.000448227732 -0.002988877406
|
| 37 |
+
C 0.169447056383 0.165172039896 -0.002591294623
|
| 38 |
+
C 0.167626941424 0.002812565558 0.167003680316
|
| 39 |
+
C 0.001712444822 0.165597802548 0.166009262571
|
| 40 |
+
C 0.086591777989 0.079680247728 0.082385779782
|
| 41 |
+
C 0.250983249044 0.248278713276 0.083338590930
|
| 42 |
+
C 0.250401698417 0.083207670128 0.253234273422
|
| 43 |
+
C 0.086068488565 0.248980850936 0.250066656830
|
| 44 |
+
C -0.001832677152 0.002502968592 0.331888949634
|
| 45 |
+
C 0.165907506119 0.168612475990 0.330764979306
|
| 46 |
+
C 0.163585304584 0.000376268261 0.502336483963
|
| 47 |
+
C -0.001308533165 0.168199726339 0.500852544992
|
| 48 |
+
C 0.085549115633 0.082641566055 0.416173528183
|
| 49 |
+
C 0.252758467029 0.251259602669 0.413496305782
|
| 50 |
+
C 0.247644442869 0.083274232283 0.582989178005
|
| 51 |
+
C 0.084726669690 0.248696216175 0.583825070325
|
| 52 |
+
C 0.002321038992 -0.000576316829 0.667975706833
|
| 53 |
+
C 0.164939580731 0.169792162656 0.665664474646
|
| 54 |
+
C 0.167523228436 0.001639400016 0.834448649732
|
| 55 |
+
C 0.001684581000 0.171857525152 0.833624013878
|
| 56 |
+
C 0.084633696174 0.083024270217 0.751987281517
|
| 57 |
+
C 0.250463577893 0.246900090831 0.749858536934
|
| 58 |
+
C 0.250793257505 0.083296633323 0.914851200909
|
| 59 |
+
C 0.086519069315 0.249741011543 0.916233491598
|
| 60 |
+
C -0.001008085280 0.332758404660 -0.001001243125
|
| 61 |
+
C 0.167874036336 0.500135960027 -0.000430923502
|
| 62 |
+
C 0.167498766053 0.332094028790 0.165972943832
|
| 63 |
+
C 0.001120299127 0.502010398759 0.167250679740
|
| 64 |
+
C 0.083032145398 0.415398574492 0.082830272691
|
| 65 |
+
C 0.248500636646 0.582576011163 0.085128119391
|
| 66 |
+
C 0.253356910756 0.417428230569 0.248827632702
|
| 67 |
+
C 0.080398932434 0.585672072790 0.252189068576
|
| 68 |
+
C 0.001094070988 0.332560079839 0.331879736431
|
| 69 |
+
C 0.168804697718 0.503575333566 0.333594598122
|
| 70 |
+
C 0.171419488495 0.336993741430 0.499247886646
|
| 71 |
+
C -0.000815584902 0.500113420952 0.500400661145
|
| 72 |
+
C 0.082503154342 0.415943122243 0.417582226677
|
| 73 |
+
C 0.254691736062 0.580632663769 0.418440073161
|
| 74 |
+
C 0.251135171909 0.416240242378 0.584694204126
|
| 75 |
+
C 0.081412476498 0.586143864854 0.583806220020
|
| 76 |
+
C -0.001023688993 0.338188836476 0.668322670718
|
| 77 |
+
C 0.166159523304 0.501718151460 0.665939619800
|
| 78 |
+
C 0.167345657644 0.331822604193 0.834406321878
|
| 79 |
+
C 0.001038861395 0.501255147589 0.833477831883
|
| 80 |
+
C 0.085371604608 0.414011163507 0.748391479880
|
| 81 |
+
C 0.249936476165 0.583664093957 0.751835055695
|
| 82 |
+
C 0.247574450151 0.416673108744 0.915918779397
|
| 83 |
+
C 0.081695855975 0.582198131571 0.918385899636
|
| 84 |
+
C -0.001113833361 0.666010635098 -0.000277103972
|
| 85 |
+
C 0.167518548983 0.835042078369 0.001237250850
|
| 86 |
+
C 0.162919565556 0.664742631764 0.168056970542
|
| 87 |
+
C 0.000436771668 0.834483593104 0.167698499844
|
| 88 |
+
C 0.081846914077 0.750260142393 0.080575035989
|
| 89 |
+
C 0.250584159670 0.914254336843 0.083703243560
|
| 90 |
+
C 0.248738355496 0.749918784506 0.247261219526
|
| 91 |
+
C 0.086333758712 0.916304473766 0.249520949743
|
| 92 |
+
C -0.000642620442 0.665702378424 0.333040024634
|
| 93 |
+
C 0.167356685036 0.833537737089 0.331358594355
|
| 94 |
+
C 0.166836027549 0.665750009153 0.499679978480
|
| 95 |
+
C 0.000418700589 0.832122410908 0.502113108510
|
| 96 |
+
C 0.082860752975 0.749797458389 0.415797450737
|
| 97 |
+
C 0.250494014481 0.918753599934 0.416687350622
|
| 98 |
+
C 0.253096779217 0.751258975052 0.584163065275
|
| 99 |
+
C 0.085584080277 0.913982469738 0.583266806990
|
| 100 |
+
C 0.000787886312 0.667107671972 0.668632673215
|
| 101 |
+
C 0.166544431580 0.834933393051 0.668477995469
|
| 102 |
+
C 0.167074734204 0.665324078770 0.833401501045
|
| 103 |
+
C 0.001429896037 0.834772497084 0.834481037465
|
| 104 |
+
C 0.083262490581 0.749130658183 0.751388954642
|
| 105 |
+
C 0.254624821824 0.913268576284 0.750782872832
|
| 106 |
+
C 0.247792183445 0.752223667474 0.917343411359
|
| 107 |
+
C 0.087061676116 0.917580431597 0.918872775298
|
| 108 |
+
C 0.334217702954 0.001175076792 -0.001204338388
|
| 109 |
+
C 0.499851578790 0.168883029718 -0.001596585957
|
| 110 |
+
C 0.502438227918 -0.000029303240 0.167322835066
|
| 111 |
+
C 0.331275457233 0.167668645554 0.163339232158
|
| 112 |
+
C 0.419961601399 0.079917436819 0.083124467745
|
| 113 |
+
C 0.582832177777 0.252318959141 0.081625521176
|
| 114 |
+
C 0.583779768424 0.078655557536 0.249637433483
|
| 115 |
+
C 0.417099840725 0.247816053068 0.249897499523
|
| 116 |
+
C 0.334289890298 -0.002469994251 0.333372658582
|
| 117 |
+
C 0.499109450746 0.167153695604 0.334292665847
|
| 118 |
+
C 0.498131491802 -0.002587718289 0.500469088231
|
| 119 |
+
C 0.336340371818 0.164993573133 0.500248609811
|
| 120 |
+
C 0.417467028964 0.085009392866 0.418030705795
|
| 121 |
+
C 0.582576880542 0.251851927954 0.418959575685
|
| 122 |
+
C 0.579174695190 0.081193017476 0.586534389107
|
| 123 |
+
C 0.420896405963 0.247836589372 0.585207719687
|
| 124 |
+
C 0.333769513179 0.003501767089 0.663723116829
|
| 125 |
+
C 0.498461268785 0.168341916905 0.669360695150
|
| 126 |
+
C 0.496896325812 -0.003642268621 0.834102198834
|
| 127 |
+
C 0.334861911681 0.166100877868 0.832288053048
|
| 128 |
+
C 0.418113597749 0.082570380600 0.748655508515
|
| 129 |
+
C 0.584778080264 0.251095676406 0.748946966391
|
| 130 |
+
C 0.582613900593 0.083193739330 0.914166516997
|
| 131 |
+
C 0.418342351297 0.249457440514 0.916763338770
|
| 132 |
+
C 0.337020406305 0.329878774532 -0.002501466685
|
| 133 |
+
C 0.498697309480 0.497899142811 0.000740294937
|
| 134 |
+
C 0.501286769121 0.333603055402 0.169609665154
|
| 135 |
+
C 0.332029507163 0.497141588513 0.168228556469
|
| 136 |
+
C 0.418718787434 0.413461020366 0.082099491315
|
| 137 |
+
C 0.585615991284 0.580363697427 0.083636572749
|
| 138 |
+
C 0.583039592300 0.417799624330 0.248949458943
|
| 139 |
+
C 0.417291015486 0.583943500295 0.248054668569
|
| 140 |
+
C 0.332815497604 0.333534936672 0.329786584221
|
| 141 |
+
C 0.501079244755 0.498582924891 0.330940623648
|
| 142 |
+
C 0.499321862193 0.336130060925 0.499817684867
|
| 143 |
+
C 0.332881215156 0.498274444276 0.503266625154
|
| 144 |
+
C 0.419037981411 0.418384981457 0.416696287505
|
| 145 |
+
C 0.579235397694 0.582706189369 0.414152006204
|
| 146 |
+
C 0.585132798395 0.417824781356 0.583835407731
|
| 147 |
+
C 0.415463753215 0.582837493002 0.584579878535
|
| 148 |
+
C 0.332357988771 0.331284633205 0.665991786704
|
| 149 |
+
C 0.496798630676 0.502308850562 0.667388684804
|
| 150 |
+
C 0.500305459089 0.336609993003 0.833916315215
|
| 151 |
+
C 0.334009295003 0.497865097954 0.829952077529
|
| 152 |
+
C 0.415777442749 0.415383417368 0.749502181222
|
| 153 |
+
C 0.585043314888 0.582799377021 0.750062216086
|
| 154 |
+
C 0.583047918555 0.416816266575 0.917108967189
|
| 155 |
+
C 0.415286939388 0.583690074378 0.918403192137
|
| 156 |
+
C 0.332515874691 0.669764743577 0.006231401711
|
| 157 |
+
C 0.501419844686 0.833172823733 -0.001006776025
|
| 158 |
+
C 0.498090765337 0.667641905881 0.161144999923
|
| 159 |
+
C 0.333793817926 0.831538571000 0.163746489680
|
| 160 |
+
C 0.418963787528 0.749953591265 0.080993852357
|
| 161 |
+
C 0.583436571435 0.915598847786 0.084903126157
|
| 162 |
+
C 0.587665162771 0.747838717832 0.250683436349
|
| 163 |
+
C 0.414530488542 0.918775004427 0.250449977602
|
| 164 |
+
C 0.332372222915 0.668291653302 0.330385271352
|
| 165 |
+
C 0.499038340987 0.831373794616 0.333692302796
|
| 166 |
+
C 0.502513049990 0.666436602029 0.499584528333
|
| 167 |
+
C 0.331992992442 0.837818478723 0.501363557374
|
| 168 |
+
C 0.421044406467 0.749801626078 0.419424129561
|
| 169 |
+
C 0.587778941833 0.916161124496 0.415832771355
|
| 170 |
+
C 0.580289191811 0.752084922174 0.586452246702
|
| 171 |
+
C 0.416944700699 0.913531413427 0.582691559039
|
| 172 |
+
C 0.338006398569 0.667876678538 0.665499849282
|
| 173 |
+
C 0.499697433308 0.833653104926 0.667117263653
|
| 174 |
+
C 0.499056867115 0.666048568466 0.834999122967
|
| 175 |
+
C 0.333206735256 0.833514761396 0.830200096743
|
| 176 |
+
C 0.416977498252 0.745483154425 0.750485543887
|
| 177 |
+
C 0.579932098092 0.917972633013 0.752738723110
|
| 178 |
+
C 0.584983639679 0.753046201188 0.918887416402
|
| 179 |
+
C 0.419264371797 0.914564501511 0.919078442846
|
| 180 |
+
C 0.667719665360 -0.001160536439 0.000327278124
|
| 181 |
+
C 0.833382551428 0.165762278701 0.001515483754
|
| 182 |
+
C 0.832454990915 -0.001225878120 0.165812210670
|
| 183 |
+
C 0.666367099039 0.162707092723 0.169431213622
|
| 184 |
+
C 0.748317795886 0.081447905454 0.086242675919
|
| 185 |
+
C 0.916063925484 0.248729241930 0.085150790032
|
| 186 |
+
C 0.915755160358 0.080105331430 0.252887880365
|
| 187 |
+
C 0.747644789685 0.249271828963 0.247863901155
|
| 188 |
+
C 0.664470840978 0.000547641223 0.333838613061
|
| 189 |
+
C 0.833734134632 0.167611830650 0.332537373653
|
| 190 |
+
C 0.833406554959 0.001031827395 0.499029461434
|
| 191 |
+
C 0.666016995983 0.163012993338 0.498835608623
|
| 192 |
+
C 0.750703363906 0.086553526937 0.416079384800
|
| 193 |
+
C 0.912193040031 0.251043504566 0.415318318555
|
| 194 |
+
C 0.917183637907 0.083700439151 0.584834117466
|
| 195 |
+
C 0.747269777650 0.250802881159 0.580249047882
|
| 196 |
+
C 0.667087098876 0.000305787998 0.669015256719
|
| 197 |
+
C 0.832747043363 0.165484045388 0.668491212361
|
| 198 |
+
C 0.829590132535 0.001119129841 0.833210130604
|
| 199 |
+
C 0.663392269855 0.165556392161 0.833540459704
|
| 200 |
+
C 0.748320596020 0.087075598522 0.750319949915
|
| 201 |
+
C 0.915557504949 0.250858286977 0.750369884965
|
| 202 |
+
C 0.918499317914 0.082434864897 0.917349704587
|
| 203 |
+
C 0.750695785251 0.247957319700 0.919362694815
|
| 204 |
+
C 0.665326957963 0.337847084732 -0.000544086521
|
| 205 |
+
C 0.832138304133 0.499357964072 -0.001004673728
|
| 206 |
+
C 0.833507164115 0.330972601019 0.169001329441
|
| 207 |
+
C 0.669202860139 0.500470846172 0.168405815622
|
| 208 |
+
C 0.750944290538 0.417916976195 0.080566134607
|
| 209 |
+
C 0.918282317734 0.582402863613 0.083289139141
|
| 210 |
+
C 0.915951401760 0.418667422197 0.248743408717
|
| 211 |
+
C 0.750956706619 0.579345937408 0.249481505156
|
| 212 |
+
C 0.668812224411 0.332183169039 0.334799126936
|
| 213 |
+
C 0.835408025779 0.502142181485 0.332411050740
|
| 214 |
+
C 0.833113509262 0.334226566113 0.500783694755
|
| 215 |
+
C 0.671182998292 0.501238570644 0.501633560440
|
| 216 |
+
C 0.752233147848 0.416627123356 0.418931731164
|
| 217 |
+
C 0.915362478260 0.583445147602 0.417673966425
|
| 218 |
+
C 0.920052284796 0.414559571367 0.581182086317
|
| 219 |
+
C 0.749063631288 0.583174689261 0.586103470595
|
| 220 |
+
C 0.662259958724 0.331101210627 0.668093996283
|
| 221 |
+
C 0.831159568360 0.499236841912 0.670857454091
|
| 222 |
+
C 0.836912118652 0.333681294634 0.835088271980
|
| 223 |
+
C 0.668565347563 0.496740419967 0.835063300370
|
| 224 |
+
C 0.748225636256 0.418726716438 0.750639414226
|
| 225 |
+
C 0.914139445419 0.583068072143 0.749897249818
|
| 226 |
+
C 0.918826562478 0.415284421968 0.918369925453
|
| 227 |
+
C 0.747759949407 0.581669490679 0.912659550085
|
| 228 |
+
C 0.667023337931 0.665959999454 -0.000568024535
|
| 229 |
+
C 0.833580712502 0.831878894560 -0.000171550987
|
| 230 |
+
C 0.834101225123 0.668987515644 0.167675293654
|
| 231 |
+
C 0.666998158318 0.833940854599 0.166095473808
|
| 232 |
+
C 0.750282128577 0.748539458848 0.082220980165
|
| 233 |
+
C 0.917885006569 0.919133614382 0.081841259780
|
| 234 |
+
C 0.918180160472 0.750991794471 0.249150504114
|
| 235 |
+
C 0.750973010100 0.915408229766 0.250193695780
|
| 236 |
+
C 0.665932013925 0.666629043263 0.330359679110
|
| 237 |
+
C 0.834527833859 0.829955729751 0.330769002548
|
| 238 |
+
C 0.834866235897 0.664625022378 0.497888761272
|
| 239 |
+
C 0.667650012983 0.833661731778 0.499842139537
|
| 240 |
+
C 0.750889639541 0.748387562866 0.418748942036
|
| 241 |
+
C 0.916765061376 0.917927150434 0.415422576943
|
| 242 |
+
C 0.916086990842 0.749840592431 0.582690838230
|
| 243 |
+
C 0.747835193691 0.915806658975 0.581410235879
|
| 244 |
+
C 0.669747188073 0.670682918573 0.664486929552
|
| 245 |
+
C 0.829848135071 0.829592209673 0.665464070550
|
| 246 |
+
C 0.832929042401 0.667214995939 0.831795569099
|
| 247 |
+
C 0.665653716128 0.836668305859 0.834074821076
|
| 248 |
+
C 0.745903493608 0.750640893879 0.751634906394
|
| 249 |
+
C 0.916950696675 0.917974680778 0.749325701915
|
| 250 |
+
C 0.918101087416 0.752735074021 0.918425631131
|
| 251 |
+
C 0.746165945883 0.916044769731 0.915313827911
|
| 252 |
+
|
| 253 |
+
K_POINTS automatic
|
| 254 |
+
3 3 3 0 0 0
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_017_s+0.010/calc.py
ADDED
|
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
| 1 |
+
from HPRO import PW2AOkernel
|
| 2 |
+
|
| 3 |
+
kernel = PW2AOkernel(
|
| 4 |
+
lcao_interface='siesta',
|
| 5 |
+
lcaodata_root='../../../aobasis',
|
| 6 |
+
hrdata_interface='qe-bgw',
|
| 7 |
+
vscdir='./VSC',
|
| 8 |
+
upfdir='../../../pseudo',
|
| 9 |
+
ecutwfn=30,
|
| 10 |
+
)
|
| 11 |
+
kernel.run_pw2ao_rs('./aohamiltonian')
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_017_s+0.010/meta.release.json
ADDED
|
@@ -0,0 +1,9 @@
|
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|
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|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"dataset": "raman_v3_308",
|
| 3 |
+
"frame_id": "strain_iso/frame_017_s+0.010",
|
| 4 |
+
"has_aohamiltonian": true,
|
| 5 |
+
"has_ki_hamiltonian": false,
|
| 6 |
+
"has_overlap": true,
|
| 7 |
+
"source_path": "/capstor/scratch/cscs/apoliukh/diamond_new_data/data/strain_iso/frame_017_s+0.010",
|
| 8 |
+
"tier": "strain_iso"
|
| 9 |
+
}
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_017_s+0.010/pw2bgw.in
ADDED
|
@@ -0,0 +1,11 @@
|
|
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|
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|
|
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|
|
|
|
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|
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|
|
|
|
|
|
|
|
| 1 |
+
&input_pw2bgw
|
| 2 |
+
prefix = 'siso017'
|
| 3 |
+
outdir = './tmp'
|
| 4 |
+
real_or_complex = 2
|
| 5 |
+
wfng_flag = .false.
|
| 6 |
+
rhog_flag = .false.
|
| 7 |
+
vxcg_flag = .false.
|
| 8 |
+
vscg_flag = .true.
|
| 9 |
+
vscg_file = 'VSC'
|
| 10 |
+
vkbg_flag = .false.
|
| 11 |
+
/
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_017_s+0.010/scf.in
ADDED
|
@@ -0,0 +1,254 @@
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|
|
|
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|
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|
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|
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|
|
|
|
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|
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|
|
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|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
prefix = 'siso017'
|
| 4 |
+
pseudo_dir = '../../../pseudo'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
tprnfor = .true.
|
| 7 |
+
tstress = .true.
|
| 8 |
+
/
|
| 9 |
+
|
| 10 |
+
&SYSTEM
|
| 11 |
+
ibrav = 0
|
| 12 |
+
nat = 216
|
| 13 |
+
ntyp = 1
|
| 14 |
+
ecutwfc = 80.0
|
| 15 |
+
ecutrho = 320.0
|
| 16 |
+
nbnd = 512
|
| 17 |
+
occupations = 'fixed'
|
| 18 |
+
/
|
| 19 |
+
|
| 20 |
+
&ELECTRONS
|
| 21 |
+
diagonalization = 'david'
|
| 22 |
+
mixing_mode = 'plain'
|
| 23 |
+
mixing_beta = 0.7
|
| 24 |
+
conv_thr = 1e-13
|
| 25 |
+
/
|
| 26 |
+
|
| 27 |
+
CELL_PARAMETERS angstrom
|
| 28 |
+
10.808010000000 0.000000000000 0.000000000000
|
| 29 |
+
0.000000000000 10.808010000000 0.000000000000
|
| 30 |
+
0.000000000000 0.000000000000 10.808010000000
|
| 31 |
+
|
| 32 |
+
ATOMIC_SPECIES
|
| 33 |
+
C 12.011 C-PBE-NLCC.upf
|
| 34 |
+
|
| 35 |
+
ATOMIC_POSITIONS crystal
|
| 36 |
+
C 0.002572900180 -0.001896057872 -0.002593370769
|
| 37 |
+
C 0.164536547376 0.165703825004 0.001397388253
|
| 38 |
+
C 0.162505674279 0.001240070004 0.166680497688
|
| 39 |
+
C 0.001490241377 0.165881977594 0.166583903921
|
| 40 |
+
C 0.082330572010 0.081566884933 0.084839983868
|
| 41 |
+
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3 3 3 0 0 0
|
releases/diamond_hpro_deeph_v2/data/raman_v3_308/strain_iso/frame_020_s+0.010/meta.release.json
ADDED
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{
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releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/aohamiltonian/info.json
ADDED
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{"isspinful": false, "fermi_level": 0.0}
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releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/calc.py
ADDED
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
from HPRO import PW2AOkernel
|
| 2 |
+
|
| 3 |
+
kernel = PW2AOkernel(
|
| 4 |
+
lcao_interface='siesta',
|
| 5 |
+
lcaodata_root='/capstor/scratch/cscs/apoliukh/qe-agent/epc_ml_zg/aobasis',
|
| 6 |
+
hrdata_interface='qe-bgw',
|
| 7 |
+
vscdir='./VSC',
|
| 8 |
+
upfdir='/capstor/scratch/cscs/apoliukh/qe-agent/epc_ml_zg/pseudos',
|
| 9 |
+
ecutwfn=30,
|
| 10 |
+
)
|
| 11 |
+
kernel.run_pw2ao_rs('./aohamiltonian')
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/meta.json
ADDED
|
@@ -0,0 +1,17 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"idx": 121,
|
| 3 |
+
"prefix": "diamond-zg-A2-121",
|
| 4 |
+
"scale_from_sc3_zg": -1.0,
|
| 5 |
+
"noise_rms_ang": 0.0,
|
| 6 |
+
"actual_rms_ang": 0.06685884891486775,
|
| 7 |
+
"max_atom_disp_ang": 0.12412521727884113,
|
| 8 |
+
"n_atoms": 54,
|
| 9 |
+
"sc_size": [
|
| 10 |
+
3,
|
| 11 |
+
3,
|
| 12 |
+
3
|
| 13 |
+
],
|
| 14 |
+
"lattice_ang": 3.547329,
|
| 15 |
+
"seed": 2042,
|
| 16 |
+
"clean_axis": "zg_displacement_line"
|
| 17 |
+
}
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/meta.release.json
ADDED
|
@@ -0,0 +1,8 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"dataset": "zg_train_a2_zgline",
|
| 3 |
+
"frame_id": "disp-121",
|
| 4 |
+
"has_aohamiltonian": true,
|
| 5 |
+
"has_ki_hamiltonian": false,
|
| 6 |
+
"has_overlap": true,
|
| 7 |
+
"source_path": "/capstor/scratch/cscs/apoliukh/qe-agent/epc_ml_zg_A2_zgline/data/disp-121"
|
| 8 |
+
}
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/nscf.in
ADDED
|
@@ -0,0 +1,90 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'nscf'
|
| 3 |
+
prefix = 'diamond-zg-A2-121'
|
| 4 |
+
pseudo_dir = '/capstor/scratch/cscs/apoliukh/qe-agent/studies/zg-test/pp'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
/
|
| 7 |
+
|
| 8 |
+
&SYSTEM
|
| 9 |
+
ibrav = 0
|
| 10 |
+
nat = 54
|
| 11 |
+
ntyp = 1
|
| 12 |
+
ecutwfc = 80.0
|
| 13 |
+
nbnd = 120
|
| 14 |
+
/
|
| 15 |
+
|
| 16 |
+
&ELECTRONS
|
| 17 |
+
diagonalization = 'david'
|
| 18 |
+
mixing_mode = 'plain'
|
| 19 |
+
mixing_beta = 0.70
|
| 20 |
+
conv_thr = 1.0d-14
|
| 21 |
+
/
|
| 22 |
+
|
| 23 |
+
CELL_PARAMETERS angstrom
|
| 24 |
+
-5.3209837466 0.0000000000 -5.3209837466
|
| 25 |
+
0.0000000000 5.3209837466 5.3209837466
|
| 26 |
+
5.3209837466 5.3209837466 0.0000000000
|
| 27 |
+
|
| 28 |
+
ATOMIC_SPECIES
|
| 29 |
+
C 12.011 C-PBE-NLCC.upf
|
| 30 |
+
|
| 31 |
+
ATOMIC_POSITIONS crystal
|
| 32 |
+
C 0.999703163338 0.001849647825 0.002326511400
|
| 33 |
+
C 0.923814705682 0.083529168083 0.081886126668
|
| 34 |
+
C 0.993277898461 0.324224753744 0.662959352084
|
| 35 |
+
C 0.915606467872 0.422376814441 0.743230529383
|
| 36 |
+
C 0.994085978358 0.675013735199 0.322500206724
|
| 37 |
+
C 0.920467331242 0.744283107615 0.418462009840
|
| 38 |
+
C 0.994706535600 0.335158742219 0.997342471559
|
| 39 |
+
C 0.921147358690 0.427861984359 0.075759331036
|
| 40 |
+
C 0.013451437799 0.668457514274 0.660451739653
|
| 41 |
+
C 0.925443947643 0.751921697941 0.751672321749
|
| 42 |
+
C 0.001397602829 0.996150625534 0.337119919667
|
| 43 |
+
C 0.921220894904 0.084351718048 0.418350498505
|
| 44 |
+
C 0.004772693949 0.657066307714 0.006190567553
|
| 45 |
+
C 0.921861605374 0.747386317618 0.081510157657
|
| 46 |
+
C 0.005192432122 0.009632674788 0.660007253236
|
| 47 |
+
C 0.910264136203 0.066067071905 0.757758459486
|
| 48 |
+
C 0.995198046216 0.339528919068 0.330328797631
|
| 49 |
+
C 0.917619955510 0.412344785120 0.424739986164
|
| 50 |
+
C 0.326113796522 0.328288281470 0.000747967770
|
| 51 |
+
C 0.239276639765 0.414157406705 0.085473563860
|
| 52 |
+
C 0.340986088699 0.663368042802 0.675547477354
|
| 53 |
+
C 0.254129697717 0.752466947680 0.761961078034
|
| 54 |
+
C 0.344105560733 0.007506688217 0.348502144806
|
| 55 |
+
C 0.251531291924 0.082852721739 0.420503285572
|
| 56 |
+
C 0.332690242090 0.661342393879 0.008933504890
|
| 57 |
+
C 0.254295300553 0.758396178342 0.089814490479
|
| 58 |
+
C 0.329489170484 0.995742907694 0.660886681782
|
| 59 |
+
C 0.250026428279 0.094282252040 0.738827872638
|
| 60 |
+
C 0.329415278132 0.332232003343 0.337437056513
|
| 61 |
+
C 0.246986576861 0.417762918562 0.404156677673
|
| 62 |
+
C 0.335199340149 0.006813369994 0.000412163324
|
| 63 |
+
C 0.251571314598 0.093779641033 0.083691018480
|
| 64 |
+
C 0.325430166357 0.325443355473 0.668131908757
|
| 65 |
+
C 0.238706499892 0.401893325838 0.752132082597
|
| 66 |
+
C 0.333763205337 0.668571190622 0.330588234620
|
| 67 |
+
C 0.241865074657 0.750224334179 0.413231896142
|
| 68 |
+
C 0.669187257327 0.662983800884 0.001530168994
|
| 69 |
+
C 0.581123127268 0.748222045598 0.081705391292
|
| 70 |
+
C 0.657958191837 0.004694454483 0.664200748471
|
| 71 |
+
C 0.580345876257 0.084001982907 0.740153626545
|
| 72 |
+
C 0.662377395335 0.330710026321 0.337950699314
|
| 73 |
+
C 0.585074864576 0.423471745430 0.413745820846
|
| 74 |
+
C 0.674345033838 0.007040563884 0.001177746380
|
| 75 |
+
C 0.578472044186 0.078015052389 0.078291765005
|
| 76 |
+
C 0.665494887472 0.336720716544 0.653647960183
|
| 77 |
+
C 0.578013060450 0.414627184497 0.746434499890
|
| 78 |
+
C 0.663580113723 0.670503290114 0.339387186505
|
| 79 |
+
C 0.584660993739 0.757724685030 0.419194572686
|
| 80 |
+
C 0.666412004537 0.328791080412 0.994887892554
|
| 81 |
+
C 0.596062876896 0.412020294371 0.094345630045
|
| 82 |
+
C 0.673202702779 0.663331813599 0.665266499705
|
| 83 |
+
C 0.585403880804 0.742630929106 0.755384490575
|
| 84 |
+
C 0.668464098757 0.998832869207 0.331536889086
|
| 85 |
+
C 0.575007715809 0.083347884875 0.417583076504
|
| 86 |
+
|
| 87 |
+
K_POINTS crystal
|
| 88 |
+
2
|
| 89 |
+
0.0000000000 0.0000000000 0.0000000000 1.0
|
| 90 |
+
0.0000000000 1.0800000000 1.0800000000 1.0
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/pw2bgw.in
ADDED
|
@@ -0,0 +1,7 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&input_pw2bgw
|
| 2 |
+
prefix = 'diamond-zg-A2-121'
|
| 3 |
+
outdir = './tmp'
|
| 4 |
+
real_or_complex = 2
|
| 5 |
+
vscg_flag = .true.
|
| 6 |
+
vscg_file = 'VSC'
|
| 7 |
+
/
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-121/scf.in
ADDED
|
@@ -0,0 +1,87 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
prefix = 'diamond-zg-A2-121'
|
| 4 |
+
pseudo_dir = '/capstor/scratch/cscs/apoliukh/qe-agent/studies/zg-test/pp'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
/
|
| 7 |
+
|
| 8 |
+
&SYSTEM
|
| 9 |
+
ibrav = 0
|
| 10 |
+
nat = 54
|
| 11 |
+
ntyp = 1
|
| 12 |
+
ecutwfc = 80.0
|
| 13 |
+
/
|
| 14 |
+
|
| 15 |
+
&ELECTRONS
|
| 16 |
+
diagonalization = 'david'
|
| 17 |
+
mixing_mode = 'plain'
|
| 18 |
+
mixing_beta = 0.70
|
| 19 |
+
conv_thr = 1.0d-14
|
| 20 |
+
/
|
| 21 |
+
|
| 22 |
+
CELL_PARAMETERS angstrom
|
| 23 |
+
-5.3209837466 0.0000000000 -5.3209837466
|
| 24 |
+
0.0000000000 5.3209837466 5.3209837466
|
| 25 |
+
5.3209837466 5.3209837466 0.0000000000
|
| 26 |
+
|
| 27 |
+
ATOMIC_SPECIES
|
| 28 |
+
C 12.011 C-PBE-NLCC.upf
|
| 29 |
+
|
| 30 |
+
ATOMIC_POSITIONS crystal
|
| 31 |
+
C 0.999703163338 0.001849647825 0.002326511400
|
| 32 |
+
C 0.923814705682 0.083529168083 0.081886126668
|
| 33 |
+
C 0.993277898461 0.324224753744 0.662959352084
|
| 34 |
+
C 0.915606467872 0.422376814441 0.743230529383
|
| 35 |
+
C 0.994085978358 0.675013735199 0.322500206724
|
| 36 |
+
C 0.920467331242 0.744283107615 0.418462009840
|
| 37 |
+
C 0.994706535600 0.335158742219 0.997342471559
|
| 38 |
+
C 0.921147358690 0.427861984359 0.075759331036
|
| 39 |
+
C 0.013451437799 0.668457514274 0.660451739653
|
| 40 |
+
C 0.925443947643 0.751921697941 0.751672321749
|
| 41 |
+
C 0.001397602829 0.996150625534 0.337119919667
|
| 42 |
+
C 0.921220894904 0.084351718048 0.418350498505
|
| 43 |
+
C 0.004772693949 0.657066307714 0.006190567553
|
| 44 |
+
C 0.921861605374 0.747386317618 0.081510157657
|
| 45 |
+
C 0.005192432122 0.009632674788 0.660007253236
|
| 46 |
+
C 0.910264136203 0.066067071905 0.757758459486
|
| 47 |
+
C 0.995198046216 0.339528919068 0.330328797631
|
| 48 |
+
C 0.917619955510 0.412344785120 0.424739986164
|
| 49 |
+
C 0.326113796522 0.328288281470 0.000747967770
|
| 50 |
+
C 0.239276639765 0.414157406705 0.085473563860
|
| 51 |
+
C 0.340986088699 0.663368042802 0.675547477354
|
| 52 |
+
C 0.254129697717 0.752466947680 0.761961078034
|
| 53 |
+
C 0.344105560733 0.007506688217 0.348502144806
|
| 54 |
+
C 0.251531291924 0.082852721739 0.420503285572
|
| 55 |
+
C 0.332690242090 0.661342393879 0.008933504890
|
| 56 |
+
C 0.254295300553 0.758396178342 0.089814490479
|
| 57 |
+
C 0.329489170484 0.995742907694 0.660886681782
|
| 58 |
+
C 0.250026428279 0.094282252040 0.738827872638
|
| 59 |
+
C 0.329415278132 0.332232003343 0.337437056513
|
| 60 |
+
C 0.246986576861 0.417762918562 0.404156677673
|
| 61 |
+
C 0.335199340149 0.006813369994 0.000412163324
|
| 62 |
+
C 0.251571314598 0.093779641033 0.083691018480
|
| 63 |
+
C 0.325430166357 0.325443355473 0.668131908757
|
| 64 |
+
C 0.238706499892 0.401893325838 0.752132082597
|
| 65 |
+
C 0.333763205337 0.668571190622 0.330588234620
|
| 66 |
+
C 0.241865074657 0.750224334179 0.413231896142
|
| 67 |
+
C 0.669187257327 0.662983800884 0.001530168994
|
| 68 |
+
C 0.581123127268 0.748222045598 0.081705391292
|
| 69 |
+
C 0.657958191837 0.004694454483 0.664200748471
|
| 70 |
+
C 0.580345876257 0.084001982907 0.740153626545
|
| 71 |
+
C 0.662377395335 0.330710026321 0.337950699314
|
| 72 |
+
C 0.585074864576 0.423471745430 0.413745820846
|
| 73 |
+
C 0.674345033838 0.007040563884 0.001177746380
|
| 74 |
+
C 0.578472044186 0.078015052389 0.078291765005
|
| 75 |
+
C 0.665494887472 0.336720716544 0.653647960183
|
| 76 |
+
C 0.578013060450 0.414627184497 0.746434499890
|
| 77 |
+
C 0.663580113723 0.670503290114 0.339387186505
|
| 78 |
+
C 0.584660993739 0.757724685030 0.419194572686
|
| 79 |
+
C 0.666412004537 0.328791080412 0.994887892554
|
| 80 |
+
C 0.596062876896 0.412020294371 0.094345630045
|
| 81 |
+
C 0.673202702779 0.663331813599 0.665266499705
|
| 82 |
+
C 0.585403880804 0.742630929106 0.755384490575
|
| 83 |
+
C 0.668464098757 0.998832869207 0.331536889086
|
| 84 |
+
C 0.575007715809 0.083347884875 0.417583076504
|
| 85 |
+
|
| 86 |
+
K_POINTS automatic
|
| 87 |
+
2 2 2 0 0 0
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/aohamiltonian/info.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"isspinful": false, "fermi_level": 0.0}
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/calc.py
ADDED
|
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
from HPRO import PW2AOkernel
|
| 2 |
+
|
| 3 |
+
kernel = PW2AOkernel(
|
| 4 |
+
lcao_interface='siesta',
|
| 5 |
+
lcaodata_root='/capstor/scratch/cscs/apoliukh/qe-agent/epc_ml_zg/aobasis',
|
| 6 |
+
hrdata_interface='qe-bgw',
|
| 7 |
+
vscdir='./VSC',
|
| 8 |
+
upfdir='/capstor/scratch/cscs/apoliukh/qe-agent/epc_ml_zg/pseudos',
|
| 9 |
+
ecutwfn=30,
|
| 10 |
+
)
|
| 11 |
+
kernel.run_pw2ao_rs('./aohamiltonian')
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/meta.json
ADDED
|
@@ -0,0 +1,17 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"idx": 122,
|
| 3 |
+
"prefix": "diamond-zg-A2-122",
|
| 4 |
+
"scale_from_sc3_zg": -0.75,
|
| 5 |
+
"noise_rms_ang": 0.0,
|
| 6 |
+
"actual_rms_ang": 0.05014413668615081,
|
| 7 |
+
"max_atom_disp_ang": 0.09309391295913085,
|
| 8 |
+
"n_atoms": 54,
|
| 9 |
+
"sc_size": [
|
| 10 |
+
3,
|
| 11 |
+
3,
|
| 12 |
+
3
|
| 13 |
+
],
|
| 14 |
+
"lattice_ang": 3.547329,
|
| 15 |
+
"seed": 2042,
|
| 16 |
+
"clean_axis": "zg_displacement_line"
|
| 17 |
+
}
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/meta.release.json
ADDED
|
@@ -0,0 +1,8 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"dataset": "zg_train_a2_zgline",
|
| 3 |
+
"frame_id": "disp-122",
|
| 4 |
+
"has_aohamiltonian": true,
|
| 5 |
+
"has_ki_hamiltonian": false,
|
| 6 |
+
"has_overlap": true,
|
| 7 |
+
"source_path": "/capstor/scratch/cscs/apoliukh/qe-agent/epc_ml_zg_A2_zgline/data/disp-122"
|
| 8 |
+
}
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/nscf.in
ADDED
|
@@ -0,0 +1,90 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'nscf'
|
| 3 |
+
prefix = 'diamond-zg-A2-122'
|
| 4 |
+
pseudo_dir = '/capstor/scratch/cscs/apoliukh/qe-agent/studies/zg-test/pp'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
/
|
| 7 |
+
|
| 8 |
+
&SYSTEM
|
| 9 |
+
ibrav = 0
|
| 10 |
+
nat = 54
|
| 11 |
+
ntyp = 1
|
| 12 |
+
ecutwfc = 80.0
|
| 13 |
+
nbnd = 120
|
| 14 |
+
/
|
| 15 |
+
|
| 16 |
+
&ELECTRONS
|
| 17 |
+
diagonalization = 'david'
|
| 18 |
+
mixing_mode = 'plain'
|
| 19 |
+
mixing_beta = 0.70
|
| 20 |
+
conv_thr = 1.0d-14
|
| 21 |
+
/
|
| 22 |
+
|
| 23 |
+
CELL_PARAMETERS angstrom
|
| 24 |
+
-5.3209837466 0.0000000000 -5.3209837466
|
| 25 |
+
0.0000000000 5.3209837466 5.3209837466
|
| 26 |
+
5.3209837466 5.3209837466 0.0000000000
|
| 27 |
+
|
| 28 |
+
ATOMIC_SPECIES
|
| 29 |
+
C 12.011 C-PBE-NLCC.upf
|
| 30 |
+
|
| 31 |
+
ATOMIC_POSITIONS crystal
|
| 32 |
+
C 0.999777372503 0.001387235869 0.001744883550
|
| 33 |
+
C 0.922027696046 0.083480209278 0.082247928217
|
| 34 |
+
C 0.994958423846 0.326501898641 0.663886180730
|
| 35 |
+
C 0.915871517454 0.420949277145 0.744922897155
|
| 36 |
+
C 0.995564483768 0.672926968066 0.325208488377
|
| 37 |
+
C 0.919517164981 0.745712330359 0.418013174164
|
| 38 |
+
C 0.996029901700 0.334702389998 0.998006853669
|
| 39 |
+
C 0.920027185802 0.425063154819 0.077652831493
|
| 40 |
+
C 0.010088578350 0.668009802372 0.662005471406
|
| 41 |
+
C 0.923249627281 0.751441273104 0.751254241429
|
| 42 |
+
C 0.001048202122 0.997112969150 0.336173273084
|
| 43 |
+
C 0.920082337727 0.084097121517 0.417929540663
|
| 44 |
+
C 0.003579520461 0.659466397452 0.004642925665
|
| 45 |
+
C 0.920562870815 0.748039738096 0.081965951458
|
| 46 |
+
C 0.003894324092 0.007224506091 0.661672106594
|
| 47 |
+
C 0.911864768702 0.070383636910 0.755818844732
|
| 48 |
+
C 0.996398534662 0.337980022635 0.331079931557
|
| 49 |
+
C 0.917381633182 0.413425255154 0.422721656407
|
| 50 |
+
C 0.327918680725 0.329549544436 0.000560975828
|
| 51 |
+
C 0.241957479706 0.414784721343 0.084938506346
|
| 52 |
+
C 0.339072899858 0.664192698768 0.673327274682
|
| 53 |
+
C 0.253097273170 0.751850210408 0.758970808643
|
| 54 |
+
C 0.341412503883 0.005630016163 0.344709941938
|
| 55 |
+
C 0.251148468826 0.082972874285 0.419544130963
|
| 56 |
+
C 0.332851014901 0.662673462076 0.006700128668
|
| 57 |
+
C 0.253221475297 0.756297133404 0.088194201310
|
| 58 |
+
C 0.330450211196 0.996807180771 0.662331678003
|
| 59 |
+
C 0.250019821092 0.091545022011 0.741620904596
|
| 60 |
+
C 0.330394791933 0.332507335841 0.336411125718
|
| 61 |
+
C 0.247739932528 0.417488855235 0.407284175039
|
| 62 |
+
C 0.334732838445 0.005110027495 0.000309122493
|
| 63 |
+
C 0.251178485831 0.091168063756 0.083601597311
|
| 64 |
+
C 0.327405958101 0.327415849938 0.667765598234
|
| 65 |
+
C 0.241529874802 0.405586660693 0.751599062065
|
| 66 |
+
C 0.333655737336 0.668095059633 0.331274509298
|
| 67 |
+
C 0.243898805876 0.750168250282 0.414090588890
|
| 68 |
+
C 0.668557109662 0.663904517330 0.001147626746
|
| 69 |
+
C 0.581675678667 0.748666533846 0.082112376920
|
| 70 |
+
C 0.660135310544 0.003520840862 0.664817228020
|
| 71 |
+
C 0.581092740409 0.083834820162 0.742615220027
|
| 72 |
+
C 0.663449713168 0.331365853074 0.336796357819
|
| 73 |
+
C 0.584639481648 0.421770475387 0.414476032419
|
| 74 |
+
C 0.672425442045 0.005280422913 0.000883309785
|
| 75 |
+
C 0.579687366356 0.079344622273 0.079552157205
|
| 76 |
+
C 0.665787832270 0.335873870741 0.656902636804
|
| 77 |
+
C 0.579343128554 0.415137054687 0.747325875035
|
| 78 |
+
C 0.664351751959 0.669544134252 0.337873723212
|
| 79 |
+
C 0.584329078520 0.755793513420 0.418562596299
|
| 80 |
+
C 0.666475670069 0.329926643643 0.996165919416
|
| 81 |
+
C 0.592880490888 0.413181887093 0.091592555984
|
| 82 |
+
C 0.671568693751 0.664165526866 0.665616541446
|
| 83 |
+
C 0.584886243819 0.744473196477 0.754038368049
|
| 84 |
+
C 0.668014740734 0.999124651906 0.331986000148
|
| 85 |
+
C 0.577089120073 0.083344246637 0.417353974162
|
| 86 |
+
|
| 87 |
+
K_POINTS crystal
|
| 88 |
+
2
|
| 89 |
+
0.0000000000 0.0000000000 0.0000000000 1.0
|
| 90 |
+
0.0000000000 1.0800000000 1.0800000000 1.0
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/pw2bgw.in
ADDED
|
@@ -0,0 +1,7 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&input_pw2bgw
|
| 2 |
+
prefix = 'diamond-zg-A2-122'
|
| 3 |
+
outdir = './tmp'
|
| 4 |
+
real_or_complex = 2
|
| 5 |
+
vscg_flag = .true.
|
| 6 |
+
vscg_file = 'VSC'
|
| 7 |
+
/
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-122/scf.in
ADDED
|
@@ -0,0 +1,87 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
&CONTROL
|
| 2 |
+
calculation = 'scf'
|
| 3 |
+
prefix = 'diamond-zg-A2-122'
|
| 4 |
+
pseudo_dir = '/capstor/scratch/cscs/apoliukh/qe-agent/studies/zg-test/pp'
|
| 5 |
+
outdir = './tmp'
|
| 6 |
+
/
|
| 7 |
+
|
| 8 |
+
&SYSTEM
|
| 9 |
+
ibrav = 0
|
| 10 |
+
nat = 54
|
| 11 |
+
ntyp = 1
|
| 12 |
+
ecutwfc = 80.0
|
| 13 |
+
/
|
| 14 |
+
|
| 15 |
+
&ELECTRONS
|
| 16 |
+
diagonalization = 'david'
|
| 17 |
+
mixing_mode = 'plain'
|
| 18 |
+
mixing_beta = 0.70
|
| 19 |
+
conv_thr = 1.0d-14
|
| 20 |
+
/
|
| 21 |
+
|
| 22 |
+
CELL_PARAMETERS angstrom
|
| 23 |
+
-5.3209837466 0.0000000000 -5.3209837466
|
| 24 |
+
0.0000000000 5.3209837466 5.3209837466
|
| 25 |
+
5.3209837466 5.3209837466 0.0000000000
|
| 26 |
+
|
| 27 |
+
ATOMIC_SPECIES
|
| 28 |
+
C 12.011 C-PBE-NLCC.upf
|
| 29 |
+
|
| 30 |
+
ATOMIC_POSITIONS crystal
|
| 31 |
+
C 0.999777372503 0.001387235869 0.001744883550
|
| 32 |
+
C 0.922027696046 0.083480209278 0.082247928217
|
| 33 |
+
C 0.994958423846 0.326501898641 0.663886180730
|
| 34 |
+
C 0.915871517454 0.420949277145 0.744922897155
|
| 35 |
+
C 0.995564483768 0.672926968066 0.325208488377
|
| 36 |
+
C 0.919517164981 0.745712330359 0.418013174164
|
| 37 |
+
C 0.996029901700 0.334702389998 0.998006853669
|
| 38 |
+
C 0.920027185802 0.425063154819 0.077652831493
|
| 39 |
+
C 0.010088578350 0.668009802372 0.662005471406
|
| 40 |
+
C 0.923249627281 0.751441273104 0.751254241429
|
| 41 |
+
C 0.001048202122 0.997112969150 0.336173273084
|
| 42 |
+
C 0.920082337727 0.084097121517 0.417929540663
|
| 43 |
+
C 0.003579520461 0.659466397452 0.004642925665
|
| 44 |
+
C 0.920562870815 0.748039738096 0.081965951458
|
| 45 |
+
C 0.003894324092 0.007224506091 0.661672106594
|
| 46 |
+
C 0.911864768702 0.070383636910 0.755818844732
|
| 47 |
+
C 0.996398534662 0.337980022635 0.331079931557
|
| 48 |
+
C 0.917381633182 0.413425255154 0.422721656407
|
| 49 |
+
C 0.327918680725 0.329549544436 0.000560975828
|
| 50 |
+
C 0.241957479706 0.414784721343 0.084938506346
|
| 51 |
+
C 0.339072899858 0.664192698768 0.673327274682
|
| 52 |
+
C 0.253097273170 0.751850210408 0.758970808643
|
| 53 |
+
C 0.341412503883 0.005630016163 0.344709941938
|
| 54 |
+
C 0.251148468826 0.082972874285 0.419544130963
|
| 55 |
+
C 0.332851014901 0.662673462076 0.006700128668
|
| 56 |
+
C 0.253221475297 0.756297133404 0.088194201310
|
| 57 |
+
C 0.330450211196 0.996807180771 0.662331678003
|
| 58 |
+
C 0.250019821092 0.091545022011 0.741620904596
|
| 59 |
+
C 0.330394791933 0.332507335841 0.336411125718
|
| 60 |
+
C 0.247739932528 0.417488855235 0.407284175039
|
| 61 |
+
C 0.334732838445 0.005110027495 0.000309122493
|
| 62 |
+
C 0.251178485831 0.091168063756 0.083601597311
|
| 63 |
+
C 0.327405958101 0.327415849938 0.667765598234
|
| 64 |
+
C 0.241529874802 0.405586660693 0.751599062065
|
| 65 |
+
C 0.333655737336 0.668095059633 0.331274509298
|
| 66 |
+
C 0.243898805876 0.750168250282 0.414090588890
|
| 67 |
+
C 0.668557109662 0.663904517330 0.001147626746
|
| 68 |
+
C 0.581675678667 0.748666533846 0.082112376920
|
| 69 |
+
C 0.660135310544 0.003520840862 0.664817228020
|
| 70 |
+
C 0.581092740409 0.083834820162 0.742615220027
|
| 71 |
+
C 0.663449713168 0.331365853074 0.336796357819
|
| 72 |
+
C 0.584639481648 0.421770475387 0.414476032419
|
| 73 |
+
C 0.672425442045 0.005280422913 0.000883309785
|
| 74 |
+
C 0.579687366356 0.079344622273 0.079552157205
|
| 75 |
+
C 0.665787832270 0.335873870741 0.656902636804
|
| 76 |
+
C 0.579343128554 0.415137054687 0.747325875035
|
| 77 |
+
C 0.664351751959 0.669544134252 0.337873723212
|
| 78 |
+
C 0.584329078520 0.755793513420 0.418562596299
|
| 79 |
+
C 0.666475670069 0.329926643643 0.996165919416
|
| 80 |
+
C 0.592880490888 0.413181887093 0.091592555984
|
| 81 |
+
C 0.671568693751 0.664165526866 0.665616541446
|
| 82 |
+
C 0.584886243819 0.744473196477 0.754038368049
|
| 83 |
+
C 0.668014740734 0.999124651906 0.331986000148
|
| 84 |
+
C 0.577089120073 0.083344246637 0.417353974162
|
| 85 |
+
|
| 86 |
+
K_POINTS automatic
|
| 87 |
+
2 2 2 0 0 0
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-123/aohamiltonian/info.json
ADDED
|
@@ -0,0 +1 @@
|
|
|
|
|
|
|
| 1 |
+
{"isspinful": false, "fermi_level": 0.0}
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-123/calc.py
ADDED
|
@@ -0,0 +1,11 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
from HPRO import PW2AOkernel
|
| 2 |
+
|
| 3 |
+
kernel = PW2AOkernel(
|
| 4 |
+
lcao_interface='siesta',
|
| 5 |
+
lcaodata_root='/capstor/scratch/cscs/apoliukh/qe-agent/epc_ml_zg/aobasis',
|
| 6 |
+
hrdata_interface='qe-bgw',
|
| 7 |
+
vscdir='./VSC',
|
| 8 |
+
upfdir='/capstor/scratch/cscs/apoliukh/qe-agent/epc_ml_zg/pseudos',
|
| 9 |
+
ecutwfn=30,
|
| 10 |
+
)
|
| 11 |
+
kernel.run_pw2ao_rs('./aohamiltonian')
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-123/meta.json
ADDED
|
@@ -0,0 +1,17 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"idx": 123,
|
| 3 |
+
"prefix": "diamond-zg-A2-123",
|
| 4 |
+
"scale_from_sc3_zg": -0.5,
|
| 5 |
+
"noise_rms_ang": 0.0,
|
| 6 |
+
"actual_rms_ang": 0.033429424457433875,
|
| 7 |
+
"max_atom_disp_ang": 0.06206260863942056,
|
| 8 |
+
"n_atoms": 54,
|
| 9 |
+
"sc_size": [
|
| 10 |
+
3,
|
| 11 |
+
3,
|
| 12 |
+
3
|
| 13 |
+
],
|
| 14 |
+
"lattice_ang": 3.547329,
|
| 15 |
+
"seed": 2042,
|
| 16 |
+
"clean_axis": "zg_displacement_line"
|
| 17 |
+
}
|
releases/diamond_hpro_deeph_v2/data/zg_train_a2_zgline/disp-123/meta.release.json
ADDED
|
@@ -0,0 +1,8 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"dataset": "zg_train_a2_zgline",
|
| 3 |
+
"frame_id": "disp-123",
|
| 4 |
+
"has_aohamiltonian": true,
|
| 5 |
+
"has_ki_hamiltonian": false,
|
| 6 |
+
"has_overlap": true,
|
| 7 |
+
"source_path": "/capstor/scratch/cscs/apoliukh/qe-agent/epc_ml_zg_A2_zgline/data/disp-123"
|
| 8 |
+
}
|