mauryzio commited on
Commit
2a70285
·
verified ·
1 Parent(s): bb18078

Regenerate motif_human: fix sequence length to exactly 8192 bp (frame-compensated upstream_flank)

Browse files
README.md CHANGED
@@ -37,6 +37,8 @@ dataset_info:
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  features:
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  - name: benchmark_id
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  dtype: string
 
 
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  - name: annotation_source
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  dtype: string
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  - name: genome_assembly
@@ -57,12 +59,22 @@ dataset_info:
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  dtype: string
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  - name: chr
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  dtype: string
 
 
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  - name: strand
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  dtype: string
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  - name: cds_genome_start
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  dtype: int64
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  - name: cds_genome_end
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  dtype: int64
 
 
 
 
 
 
 
 
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  - name: transcript_id
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  dtype: string
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  - name: gene_id
@@ -73,6 +85,10 @@ dataset_info:
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  dtype: int64
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  - name: is_first_exon
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  dtype: int64
 
 
 
 
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  - name: cds_start_in_seq
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  dtype: int64
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  - name: cds_end_in_seq
@@ -93,10 +109,10 @@ dataset_info:
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  dtype: string
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  splits:
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  - name: test
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- num_bytes: 333515725
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  num_examples: 20000
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- download_size: 151833315
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- dataset_size: 333515725
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  - config_name: promoter_revcomp
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  features:
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  - name: benchmark_id
 
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  features:
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  - name: benchmark_id
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  dtype: string
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+ - name: script_version
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+ dtype: string
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  - name: annotation_source
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  dtype: string
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  - name: genome_assembly
 
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  dtype: string
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  - name: chr
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  dtype: string
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+ - name: chrom_length
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+ dtype: int64
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  - name: strand
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  dtype: string
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  - name: cds_genome_start
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  dtype: int64
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  - name: cds_genome_end
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  dtype: int64
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+ - name: window_genome_start
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+ dtype: int64
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+ - name: window_genome_end
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+ dtype: int64
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+ - name: upstream_actual
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+ dtype: int64
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+ - name: is_clamped
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+ dtype: int64
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  - name: transcript_id
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  dtype: string
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  - name: gene_id
 
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  dtype: int64
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  - name: is_first_exon
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  dtype: int64
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+ - name: frame
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+ dtype: int64
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+ - name: phase_gtf
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+ dtype: int64
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  - name: cds_start_in_seq
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  dtype: int64
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  - name: cds_end_in_seq
 
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  dtype: string
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  splits:
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  - name: test
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+ num_bytes: 334784343
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  num_examples: 20000
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+ download_size: 152107926
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+ dataset_size: 334784343
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  - config_name: promoter_revcomp
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  features:
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  - name: benchmark_id
motif_human/test-00000-of-00001.parquet CHANGED
@@ -1,3 +1,3 @@
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