Datasets:
Formats:
parquet
Size:
1K - 10K
Tags:
cadence-weekly
geo-ca
surveillance-respiratory
pathogen-influenza
pathogen-sars-cov-2
pathogen-rsv
License:
Initial ingest — canada-fluwatch — card update
Browse files
README.md
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| 1 |
+
---
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| 2 |
+
pretty_name: PHAC Respiratory Virus Detection Surveillance — Canada weekly
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| 3 |
+
license: other
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| 4 |
+
license_name: ogl-canada-2.0
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| 5 |
+
license_link: https://open.canada.ca/en/open-government-licence-canada
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| 6 |
+
size_categories:
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| 7 |
+
- 10K<n<100K
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| 8 |
+
tags:
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| 9 |
+
- cadence-weekly
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| 10 |
+
- geo-ca
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| 11 |
+
- surveillance-respiratory
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| 12 |
+
- pathogen-influenza
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| 13 |
+
- pathogen-sars-cov-2
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| 14 |
+
- pathogen-rsv
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| 15 |
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- tier-2
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| 16 |
+
- availability-open
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| 17 |
+
schema_version: '0.1'
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| 18 |
+
source_id: canada-fluwatch
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| 19 |
+
source_url: https://health-infobase.canada.ca/respiratory-virus-surveillance/
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| 20 |
+
manifest_section: §5.6
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| 21 |
+
surveillance_category: respiratory
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| 22 |
+
pathogens:
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| 23 |
+
- influenza
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| 24 |
+
- influenza-a
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| 25 |
+
- influenza-b
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| 26 |
+
- sars-cov-2
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| 27 |
+
- rsv
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| 28 |
+
- hmpv
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| 29 |
+
- adenovirus
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| 30 |
+
- parainfluenza
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| 31 |
+
- rhinovirus-enterovirus
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| 32 |
+
- seasonal-coronavirus
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| 33 |
+
availability: open
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| 34 |
+
availability_notes: null
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| 35 |
+
access_type: csv
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| 36 |
+
tier: 2
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| 37 |
+
cadence: weekly
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| 38 |
+
geography_levels:
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| 39 |
+
- national
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| 40 |
+
- subnational-state
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| 41 |
+
- subnational-region
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| 42 |
+
geography_countries:
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| 43 |
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- CA
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| 44 |
+
gold_standard_for: []
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| 45 |
+
vintaged_version_of: null
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| 46 |
+
succeeds: null
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| 47 |
+
derived_from: []
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| 48 |
+
value_columns:
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| 49 |
+
- name: tests
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| 50 |
+
unit: specimens/week
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| 51 |
+
value_type: incident
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| 52 |
+
description: Number of specimens tested for this virus, this region, this week
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| 53 |
+
aggregation: sum
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| 54 |
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- name: detections
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| 55 |
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unit: positives/week
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| 56 |
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value_type: incident
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| 57 |
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description: Number of specimens that detected this virus
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| 58 |
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aggregation: sum
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| 59 |
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- name: percentpositive
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| 60 |
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unit: percent (0-100)
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| 61 |
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value_type: proportion
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| 62 |
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description: Share of specimens positive (`detections / tests`)
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| 63 |
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aggregation: rate
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| 64 |
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notes:
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| 65 |
+
extra_columns:
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| 66 |
+
- column: condition_native
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| 67 |
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description: PHAC virus name (`SARS-CoV-2`, `Influenza A`, `RSV`, ...). `condition` is the EPI-Eval slug.
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| 68 |
+
- column: location_name
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| 69 |
+
description: Province / territory / region name from PHAC. `location_id` is canonical.
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| 70 |
+
interpretation_caveats:
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| 71 |
+
- column: condition
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| 72 |
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caveat: Includes 'adenovirus', 'parainfluenza', 'rhinovirus-enterovirus', 'seasonal-coronavirus' which are *not yet in
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| 73 |
+
vocabularies.yaml*. Adding them is recommended (low-cost extension).
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| 74 |
+
- column: percentpositive
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| 75 |
+
caveat: PHAC reports % to 1 decimal; small jurisdictions can swing widely week-to-week.
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| 76 |
+
general: 'PHAC publishes a single weekly CSV. Long-format with one row per
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| 77 |
+
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| 78 |
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(date × jurisdiction × virus). The dataset replaces FluWatch+ as Canada''s
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| 79 |
+
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| 80 |
+
multi-virus respiratory surveillance feed. Note that some "regions" are PHAC
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| 81 |
+
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| 82 |
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rollups (Atlantic, Prairies) sitting alongside individual provinces.
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| 83 |
+
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| 84 |
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'
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| 85 |
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extra:
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| 86 |
+
source_columns_omitted: 2 (week, weekorder, year — derivable from date)
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| 87 |
+
vocabularies_extension_request:
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| 88 |
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- new_pathogens:
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| 89 |
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- adenovirus
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| 90 |
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- parainfluenza
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| 91 |
+
- rhinovirus-enterovirus
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| 92 |
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- seasonal-coronavirus
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| 93 |
+
computed:
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| 94 |
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last_ingested: '2026-04-26T12:48:31Z'
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| 95 |
+
row_count: 2720
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| 96 |
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time_coverage:
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| 97 |
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- start: '2025-08-30'
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| 98 |
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end: '2026-04-18'
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| 99 |
+
geography_unit_count: 17
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| 100 |
+
observed_cadence_days: 7
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| 101 |
+
missing_gaps: []
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| 102 |
+
data_hash: a72d12e0dd10548a
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| 103 |
+
---
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| 104 |
+
|
| 105 |
+
# PHAC Respiratory Virus Detection Surveillance — Canada weekly
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| 106 |
+
|
| 107 |
+
PHAC publishes a single weekly CSV. Long-format with one row per
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| 108 |
+
(date × jurisdiction × virus). The dataset replaces FluWatch+ as Canada's
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| 109 |
+
multi-virus respiratory surveillance feed. Note that some "regions" are PHAC
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| 110 |
+
rollups (Atlantic, Prairies) sitting alongside individual provinces.
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| 111 |
+
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| 112 |
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**Source:** <https://health-infobase.canada.ca/respiratory-virus-surveillance/>
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| 113 |
+
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| 114 |
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## Coverage
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| 115 |
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| 116 |
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- **Time:** 2025-08-30 → 2026-04-18
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| 117 |
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- **Cadence:** `weekly` (observed median spacing: 7 days)
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| 118 |
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- **Geography levels:** `national`, `subnational-state`, `subnational-region` — 17 unique location IDs
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| 119 |
+
- **Countries:** CA
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| 120 |
+
- **Pathogens:** `influenza`, `influenza-a`, `influenza-b`, `sars-cov-2`, `rsv`, `hmpv`, `adenovirus`, `parainfluenza`, `rhinovirus-enterovirus`, `seasonal-coronavirus`
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| 121 |
+
- **Surveillance category:** `respiratory`
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| 122 |
+
- **Rows:** 2,720
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| 123 |
+
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| 124 |
+
## Columns
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| 125 |
+
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| 126 |
+
| Column | Unit | value_type | Aggregation | Description |
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| 127 |
+
|--------|------|------------|-------------|-------------|
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| 128 |
+
| `tests` | specimens/week | `incident` | `sum` | Number of specimens tested for this virus, this region, this week |
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| 129 |
+
| `detections` | positives/week | `incident` | `sum` | Number of specimens that detected this virus |
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| 130 |
+
| `percentpositive` | percent (0-100) | `proportion` | `rate` | Share of specimens positive (`detections / tests`) |
|
| 131 |
+
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| 132 |
+
### Additional data columns
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| 133 |
+
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| 134 |
+
- **`condition_native`** — PHAC virus name (`SARS-CoV-2`, `Influenza A`, `RSV`, ...). `condition` is the EPI-Eval slug.
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| 135 |
+
- **`location_name`** — Province / territory / region name from PHAC. `location_id` is canonical.
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| 136 |
+
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| 137 |
+
## Interpretation caveats
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| 138 |
+
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| 139 |
+
Things that may differ from how other sources define a similar measure. If you're combining this dataset with another, read these first.
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| 140 |
+
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| 141 |
+
- **`condition`** — Includes 'adenovirus', 'parainfluenza', 'rhinovirus-enterovirus', 'seasonal-coronavirus' which are *not yet in vocabularies.yaml*. Adding them is recommended (low-cost extension).
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| 142 |
+
- **`percentpositive`** — PHAC reports % to 1 decimal; small jurisdictions can swing widely week-to-week.
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| 143 |
+
|
| 144 |
+
## Access
|
| 145 |
+
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| 146 |
+
- **Availability:** `open`
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| 147 |
+
- **Access type:** `csv`
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| 148 |
+
- **License:** other
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| 149 |
+
- **Tier:** 2
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| 150 |
+
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| 151 |
+
---
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| 152 |
+
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| 153 |
+
*Schema version `0.1` · Last ingested 2026-04-26T12:48:31Z · `source_id: canada-fluwatch` · Manifest section §5.6*
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