| """ |
| Tests for fluid dynamics residual computations. |
| Compares torch implementations against numpy reference implementations. |
| |
| Can be run as: |
| 1. Pytest test: pytest tests/test_fluids.py (skips if data not found) |
| 2. Standalone script: python tests/test_fluids.py --filename <path_to_data> |
| """ |
|
|
| import argparse |
| import os |
| import sys |
| from pathlib import Path |
|
|
| import h5py |
| import numpy as np |
| import pytest |
| import torch |
| from loguru import logger |
|
|
| from pdeinvbench.losses.fluids import ( |
| compute_advection, |
| compute_stream_function, |
| laplacian, |
| turbulent_flow_residual, |
| ) |
|
|
|
|
| def find_turbulent_flow_data(): |
| """Try to find turbulent flow data in common locations.""" |
| possible_paths = [ |
| Path("../data/2D_turbulent-flow_nu=0.006153085601625313.h5"), |
| Path("data/2D_turbulent-flow_nu=0.006153085601625313.h5"), |
| Path("/data/shared/meta-pde/turbulent-flow-2d/train").glob("*.h5"), |
| ] |
|
|
| for path in possible_paths: |
| if isinstance(path, Path) and path.exists(): |
| return str(path) |
| |
| try: |
| for file in path: |
| if file.exists(): |
| return str(file) |
| except (TypeError, AttributeError): |
| pass |
|
|
| return None |
|
|
|
|
| @pytest.fixture |
| def turbulent_flow_datafile(): |
| """Fixture that provides path to test data.""" |
| data_path = find_turbulent_flow_data() |
| if data_path is None: |
| pytest.skip( |
| "Turbulent flow test data not found. " |
| "This test requires real PDE data and is skipped in CI/CD. " |
| "Run manually with: python tests/test_fluids.py --filename <path>" |
| ) |
| return data_path |
|
|
|
|
| def wrapper(func): |
| """Convert torch tensor outputs to numpy for comparison.""" |
|
|
| def _wrapper(*args): |
| |
| new_args = [ |
| torch.from_numpy(a).float() if isinstance(a, np.ndarray) else a |
| for a in args |
| ] |
| out = func(*new_args) |
| return out.cpu().numpy() |
|
|
| return _wrapper |
|
|
|
|
| def _maybe_unsqueeze_np(u): |
| """Ensure last dimension exists for channel.""" |
| return u if u.shape[-1] == 1 else np.expand_dims(u, axis=-1) |
|
|
|
|
| def compare_funcs(f1, f2): |
| """Compare outputs of two functions and log the difference.""" |
|
|
| def compare(f1args, f2args): |
| reference = _maybe_unsqueeze_np(f1(*f1args)) |
| newout = wrapper(f2)(*f2args) |
| diff = np.linalg.norm(reference - newout) |
| logger.info(f"Diff between {f1.__name__} and {f2.__name__}: {diff:.2e}") |
|
|
| |
| assert diff < 1e-3, f"Difference too large: {diff:.2e}" |
| return diff |
|
|
| return compare |
|
|
|
|
| def run_fluids_comparison(filename: str): |
| """ |
| Run the fluids residual computation comparison. |
| |
| Args: |
| filename: Path to turbulent flow HDF5 data file |
| """ |
| |
| from fluids_numpy_reference import ( |
| advection as advection_np_base, |
| compute_stream_function as compute_stream_function_np, |
| laplacian as laplacian_np, |
| tf_residual_numpy, |
| ) |
|
|
| logger.info(f"Loading data from: {filename}") |
|
|
| |
| try: |
| dataset = h5py.File(filename, "r") |
| traj_idx = "0000" |
| data = dataset[traj_idx]["data"][:] |
| logger.info(f"Data shape: {data.shape}") |
| t = dataset[traj_idx]["grid/t"][:] |
| x = dataset[traj_idx]["grid/x"][:] |
| y = dataset[traj_idx]["grid/y"][:] |
| dataset.close() |
| except (KeyError, FileNotFoundError) as e: |
| logger.error(f"Failed to load data: {e}") |
| raise |
|
|
| |
| nu = ( |
| os.path.basename(filename) |
| .split("=")[-1] |
| .replace(".h5", "") |
| .replace(".hdf5", "") |
| ) |
| nu: float = float(nu) |
| logger.info(f"Viscosity parameter nu: {nu}") |
|
|
| dx = x[1] - x[0] |
| dy = y[1] - y[0] |
|
|
| |
| residual_norm = np.linalg.norm(wrapper(turbulent_flow_residual)(data, t, x, y, nu)) |
| logger.info(f"Computed residual norm: {residual_norm:.2e}") |
|
|
| |
| logger.info("\n=== Testing stream function (Fourier=False) ===") |
| compute_stream_function_np.__name__ = "compute_stream_function_np, fourier=False" |
| compare_funcs(compute_stream_function_np, compute_stream_function)( |
| (data, x, y, False), (data, dx, dy, False) |
| ) |
|
|
| |
| logger.info("\n=== Testing stream function (Fourier=True) ===") |
| compute_stream_function_np.__name__ = "compute_stream_function_np, fourier=True" |
| compare_funcs(compute_stream_function_np, compute_stream_function)( |
| (data, x, y, True), (data, dx, dy, True) |
| ) |
|
|
| |
| logger.info("\n=== Testing advection ===") |
|
|
| def advection_np(u, x, y): |
| return advection_np_base(u, x, y, stream_func=compute_stream_function_np)[0] |
|
|
| advection_np.__name__ = "advection_np" |
| compare_funcs(advection_np, compute_advection)((data, x, y), (data, dx, dy)) |
|
|
| |
| logger.info("\n=== Testing laplacian ===") |
| laplacian_np.__name__ = "laplacian_np" |
| compare_funcs(laplacian_np, laplacian)((data, x, y), (data, dx, dy)) |
|
|
| |
| logger.info("\n=== Testing velocity vx ===") |
|
|
| def advection_np_vx(u, x, y): |
| return advection_np_base(u, x, y, stream_func=compute_stream_function_np)[1] |
|
|
| advection_np_vx.__name__ = "advection_np for vx" |
| compare_funcs( |
| advection_np_vx, lambda *args: compute_advection(*args, return_velocity=True)[1] |
| )((data, x, y), (data, dx, dy)) |
|
|
| |
| logger.info("\n=== Testing velocity vy ===") |
|
|
| def advection_np_vy(u, x, y): |
| return advection_np_base(u, x, y, stream_func=compute_stream_function_np)[2] |
|
|
| advection_np_vy.__name__ = "advection_np for vy" |
| compare_funcs( |
| advection_np_vy, lambda *args: compute_advection(*args, return_velocity=True)[2] |
| )((data, x, y), (data, dx, dy)) |
|
|
| |
| logger.info("\n=== Testing full turbulent flow residual ===") |
| compare_funcs(tf_residual_numpy, turbulent_flow_residual)( |
| (data, t, x, y, nu), (data, t, x, y, nu) |
| ) |
|
|
| logger.success("\n✓ All fluids tests passed!") |
|
|
|
|
| @pytest.mark.slow |
| @pytest.mark.data_required |
| def test_fluids_residual(turbulent_flow_datafile): |
| """ |
| Pytest wrapper for fluids residual comparison. |
| |
| Automatically skipped if test data is not available. |
| Run with: pytest tests/test_fluids.py -v -m data_required |
| """ |
| run_fluids_comparison(turbulent_flow_datafile) |
|
|
|
|
| if __name__ == "__main__": |
| |
| parser = argparse.ArgumentParser( |
| description="Validate torch turbulent flow residual computations against numpy reference", |
| formatter_class=argparse.RawDescriptionHelpFormatter, |
| epilog=""" |
| Examples: |
| python tests/test_fluids.py --filename data/2D_turbulent-flow_nu=0.006153085601625313.h5 |
| python tests/test_fluids.py --auto-find |
| """, |
| ) |
| parser.add_argument( |
| "--filename", type=str, help="Path to turbulent flow HDF5 data file" |
| ) |
| parser.add_argument( |
| "--auto-find", |
| action="store_true", |
| help="Automatically search for data file in common locations", |
| ) |
|
|
| args = parser.parse_args() |
|
|
| if args.auto_find or args.filename is None: |
| logger.info("Searching for turbulent flow data...") |
| filename = find_turbulent_flow_data() |
| if filename is None: |
| logger.error( |
| "Could not find turbulent flow data. " |
| "Please specify path with --filename" |
| ) |
| sys.exit(1) |
| logger.info(f"Found data at: {filename}") |
| else: |
| filename = args.filename |
|
|
| if not Path(filename).exists(): |
| logger.error(f"File not found: {filename}") |
| sys.exit(1) |
|
|
| try: |
| run_fluids_comparison(filename) |
| except Exception as e: |
| logger.error(f"Test failed with error: {e}") |
| import traceback |
|
|
| traceback.print_exc() |
| sys.exit(1) |
|
|