"""This module contains one line functions that should, by all rights, be in numpy. """ import numpy as np ## Demean -- remove the mean from each column demean = lambda v: v-v.mean(0) demean.__doc__ = """Removes the mean from each column of [v].""" dm = demean ## Z-score -- z-score each column def zscore(v): s = v.std(0) m = v - v.mean(0) for i in range(len(s)): if s[i] != 0.: m[:, i] /= s[i] return m # zscore = lambda v: (v-v.mean(0))/v.std(0) zscore.__doc__ = """Z-scores (standardizes) each column of [v].""" zs = zscore ## Rescale -- make each column have unit variance rescale = lambda v: v/v.std(0) rescale.__doc__ = """Rescales each column of [v] to have unit variance.""" rs = rescale ## Matrix corr -- find correlation between each column of c1 and the corresponding column of c2 mcorr = lambda c1,c2: (zs(c1)*zs(c2)).mean(0) mcorr.__doc__ = """Matrix correlation. Find the correlation between each column of [c1] and the corresponding column of [c2].""" ## Cross corr -- find corr. between each row of c1 and EACH row of c2 xcorr = lambda c1,c2: np.dot(zs(c1.T).T,zs(c2.T)) / (c1.shape[1]) xcorr.__doc__ = """Cross-column correlation. Finds the correlation between each row of [c1] and each row of [c2]."""