{ "use_bulk": true, "pred_celltype": true, "bidirectional": false, "retrain_cellprop_only": false, "use_context_loss": true, "pixel_size": 0.5, "num_workers": 4, "batch_size": 4, "img_emb_dim": 1536, "patch_size": [3584, 896, 224], "mse_weight": 10, "prop_weight": 0.1, "focal_gamma": 0.5, "num_epochs": 600, "exp_epochs": 400, "lr": 0.001, "lr_prop": 0.001, "weight_decay": 0.00001, "stepLR_step_exp": 200, "stepLR_gamma_exp": 0.1, "stepLR_step_prop": 50, "stepLR_gamma_prop": 0.5, "gene_list_file": "LUAD_gene.csv", "gene_norm_factor_file": "LUAD_gene_normalize_factor.csv", "celltype_file": "LUAD_cell_types.csv" }