| { |
| "seed": 42, |
| "debug": false, |
| "wandb": true, |
| "mask_ratio": 0.9, |
| "noise": 0.0, |
| "datamodule": { |
| "batch_size": 32, |
| "pin_memory": true, |
| "num_workers": 12, |
| "_target_": "tedbench.data.LightningStructureDataset", |
| "root": "./datasets/ted", |
| "dataset_name": "afdb_stream" |
| }, |
| "trainer": { |
| "_target_": "pytorch_lightning.Trainer", |
| "accelerator": "auto", |
| "max_steps": 100000, |
| "strategy": "auto", |
| "devices": "auto", |
| "default_root_dir": "${logs.path}", |
| "num_sanity_val_steps": 0, |
| "val_check_interval": 1000, |
| "check_val_every_n_epoch": null, |
| "accumulate_grad_batches": 4, |
| "num_nodes": 4 |
| }, |
| "train": { |
| "optimizer": { |
| "_target_": "torch.optim.AdamW", |
| "lr": 0.0024, |
| "weight_decay": 0.05, |
| "betas": [ |
| 0.9, |
| 0.95 |
| ] |
| }, |
| "lr_scheduler": { |
| "_target_": "tedbench.lr_schedulers.get_cosine_schedule_with_warmup", |
| "warmup_steps": 5000, |
| "max_steps": "${eval:0.99 * ${trainer.max_steps}}", |
| "min_factor": 0.1 |
| }, |
| "ckpt_path": null, |
| "compile": false |
| }, |
| "model": { |
| "_target_": "tedbench.model.miae_model", |
| "name": "miae_l", |
| "use_seq_input": false, |
| "masking_strategy": "fixed", |
| "use_inverse_folding_loss": true |
| }, |
| "logs": { |
| "prefix": "logs/pretrain/${datamodule.dataset_name}/${seed}", |
| "path": "${logs.prefix}/runs/${now:%Y-%m-%d}_${now:%H-%M-%S}" |
| }, |
| "mode": {}, |
| "_model_class": "miae" |
| } |
