Update experiment output: run_all_v2.log

Update experiment output: summary.json

Update experiment output: all_experiment_results.csv

Update experiment output: fig5_inflation.png

Update experiment output: fig4_honesty.png

Update experiment output: fig3_pipeline_comparison.png

Update experiment output: fig2_f1_comparison.png

Update experiment output: fig1_breakpoint.png

Add run_all.py execution log

Add cleaned experiment output: summary.json

Add cleaned experiment output: all_experiment_results.csv

Add cleaned experiment output: topological_metrics.csv

Add cleaned experiment output: fig4_honesty.png

Add cleaned experiment output: fig3_pipeline_comparison.png

Add cleaned experiment output: fig2_f1_comparison.png

Add cleaned experiment output: fig1_breakpoint.png